BLASTX nr result

ID: Glycyrrhiza24_contig00025502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025502
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ...    75   7e-12

>ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 612

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/81 (54%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
 Frame = +1

Query: 13  RSNLSVFPLVLLRINQQNSLAIINHCDIVQQPFMSVAFNVFNPSNTDTFLAPTKFGFSVR 192
           RSNL +F +VL RI+  NS+A+ NHC IV++P M   FN F+P  ++TFLAP KFGFSV+
Sbjct: 5   RSNLPLFSVVLSRISH-NSIAV-NHCHIVKKPLMGATFNFFDPFKSETFLAPQKFGFSVK 62

Query: 193 LFST------LGVPTNAPALG 237
            FST      LG  T+APA G
Sbjct: 63  PFSTSSSTRSLGASTDAPAHG 83


>ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499595|gb|AES80798.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 585

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/63 (58%), Positives = 45/63 (71%)
 Frame = +1

Query: 13  RSNLSVFPLVLLRINQQNSLAIINHCDIVQQPFMSVAFNVFNPSNTDTFLAPTKFGFSVR 192
           RSNLSVF + LLRI  +++   +NHCDIV +P M+ +FN FN SN  TF AP KF FSVR
Sbjct: 5   RSNLSVFSIALLRI--RHNAITVNHCDIVHKPLMNASFNAFNSSNYYTFFAPPKFSFSVR 62

Query: 193 LFS 201
            FS
Sbjct: 63  FFS 65


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