BLASTX nr result

ID: Glycyrrhiza24_contig00025490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025490
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago trunca...   249   2e-64
ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago trunca...   238   3e-61
ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...   238   5e-61
ref|XP_003616126.1| DNA-binding protein SMUBP-2 [Medicago trunca...   237   8e-61
ref|XP_003616131.1| Regulator of nonsense transcripts-like prote...   233   9e-60

>ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
            gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2
            [Medicago truncatula]
          Length = 978

 Score =  249 bits (635), Expect = 2e-64
 Identities = 126/160 (78%), Positives = 141/160 (88%)
 Frame = -2

Query: 494  KVSIGIISPYKAQVYEIHEKVKQYILVSDPYFSVSVRSIDGFQGGEEDIIIISTVRSNES 315
            KVSIGIISPYKAQV+EI EKVKQY +VSDP FSVSVRS+DGFQGGEEDIIIISTVRSN S
Sbjct: 757  KVSIGIISPYKAQVHEIQEKVKQY-MVSDPNFSVSVRSVDGFQGGEEDIIIISTVRSNLS 815

Query: 314  GKVGFLSDRQRANVSITRARYCLWILGNATTLINSNSAWSKLVLDAKERNCFHDADEDKK 135
            GKVGFLS+RQRANV+ITRARYCLWI+GNATTL+NSNS W K+V+DAKER+CFH+ DEDKK
Sbjct: 816  GKVGFLSNRQRANVAITRARYCLWIVGNATTLVNSNSVWRKVVVDAKERDCFHNTDEDKK 875

Query: 134  LAQAIEDALFEFELLYEPVSPFKKLSLRDKSDSAATSSRY 15
            L Q IEDA FEFELL E  S F KLS+RD S+++  SS Y
Sbjct: 876  LDQVIEDACFEFELLDESASAFNKLSIRDMSETSTFSSHY 915


>ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
            gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2
            [Medicago truncatula]
          Length = 950

 Score =  238 bits (608), Expect = 3e-61
 Identities = 119/153 (77%), Positives = 136/153 (88%)
 Frame = -2

Query: 494  KVSIGIISPYKAQVYEIHEKVKQYILVSDPYFSVSVRSIDGFQGGEEDIIIISTVRSNES 315
            KVSIGIISPYKAQV+EI E+VKQY +VS P FS++VRS+DGFQGGEED+IIISTVRSN  
Sbjct: 794  KVSIGIISPYKAQVHEIQERVKQY-MVSAPNFSINVRSVDGFQGGEEDLIIISTVRSNFG 852

Query: 314  GKVGFLSDRQRANVSITRARYCLWILGNATTLINSNSAWSKLVLDAKERNCFHDADEDKK 135
            GKVGFLS+RQR NV+ITRARYCLWI+GNATTLINSNS W K+V+DAK+RNCFH+ADEDKK
Sbjct: 853  GKVGFLSNRQRTNVAITRARYCLWIVGNATTLINSNSVWRKVVMDAKQRNCFHNADEDKK 912

Query: 134  LAQAIEDALFEFELLYEPVSPFKKLSLRDKSDS 36
            L Q IEDA FEFELL E  S F KLS+RDKS++
Sbjct: 913  LDQVIEDACFEFELLDESESAFNKLSIRDKSET 945


>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago truncatula]
            gi|355489654|gb|AES70857.1| DNA polymerase
            alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score =  238 bits (606), Expect = 5e-61
 Identities = 120/159 (75%), Positives = 136/159 (85%)
 Frame = -2

Query: 494  KVSIGIISPYKAQVYEIHEKVKQYILVSDPYFSVSVRSIDGFQGGEEDIIIISTVRSNES 315
            KVSIGIISPY AQVYEI EK+K    +SDP FSVSVRS+DGFQGGEEDIIIISTVRSNE 
Sbjct: 764  KVSIGIISPYNAQVYEIQEKIKPNNSISDPNFSVSVRSVDGFQGGEEDIIIISTVRSNED 823

Query: 314  GKVGFLSDRQRANVSITRARYCLWILGNATTLINSNSAWSKLVLDAKERNCFHDADEDKK 135
             K+GFLS+RQRANV++TRAR+CLWILGN TTL  S+S W +LVLDAKER CFH+ADEDKK
Sbjct: 824  AKIGFLSNRQRANVALTRARHCLWILGNETTLEKSDSIWKELVLDAKERGCFHNADEDKK 883

Query: 134  LAQAIEDALFEFELLYEPVSPFKKLSLRDKSDSAATSSR 18
            LA+AIEDAL E E L E  SPFKKLSL+ KS++ AT+SR
Sbjct: 884  LAEAIEDALLEIEFLDESESPFKKLSLQGKSETFATTSR 922


>ref|XP_003616126.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
            gi|355517461|gb|AES99084.1| DNA-binding protein SMUBP-2
            [Medicago truncatula]
          Length = 1046

 Score =  237 bits (604), Expect = 8e-61
 Identities = 122/158 (77%), Positives = 134/158 (84%)
 Frame = -2

Query: 494  KVSIGIISPYKAQVYEIHEKVKQYILVSDPYFSVSVRSIDGFQGGEEDIIIISTVRSNES 315
            KVSIGIISPY AQV+EI EKVKQYI VSD  FSVSVRS+DGFQGGEEDIIIISTVRSNES
Sbjct: 880  KVSIGIISPYNAQVFEIQEKVKQYIAVSDTDFSVSVRSVDGFQGGEEDIIIISTVRSNES 939

Query: 314  GKVGFLSDRQRANVSITRARYCLWILGNATTLINSNSAWSKLVLDAKERNCFHDADEDKK 135
            GKVGFLS+RQR NV+ITRARYCLWILGNA TLINS+S W  +VLDAK R+CFH+A E+KK
Sbjct: 940  GKVGFLSNRQRVNVAITRARYCLWILGNAATLINSDSVWRNVVLDAKRRDCFHNAAENKK 999

Query: 134  LAQAIEDALFEFELLYEPVSPFKKLSLRDKSDSAATSS 21
            LA+AI D LFE +LL    SPFKKLSL  KS+   TSS
Sbjct: 1000 LARAINDVLFEIKLLDGSESPFKKLSLGGKSEKPTTSS 1037


>ref|XP_003616131.1| Regulator of nonsense transcripts-like protein [Medicago truncatula]
            gi|355517466|gb|AES99089.1| Regulator of nonsense
            transcripts-like protein [Medicago truncatula]
          Length = 950

 Score =  233 bits (595), Expect = 9e-60
 Identities = 119/159 (74%), Positives = 135/159 (84%)
 Frame = -2

Query: 494  KVSIGIISPYKAQVYEIHEKVKQYILVSDPYFSVSVRSIDGFQGGEEDIIIISTVRSNES 315
            KVSIGIISPY AQVYEI EKVKQY  VSD  FSVSVRSIDGFQGGEEDIIIISTVRSN S
Sbjct: 763  KVSIGIISPYNAQVYEIQEKVKQYTSVSDTDFSVSVRSIDGFQGGEEDIIIISTVRSNGS 822

Query: 314  GKVGFLSDRQRANVSITRARYCLWILGNATTLINSNSAWSKLVLDAKERNCFHDADEDKK 135
            G VGFLS+RQRANV++TRARYCLWILGNA+TL NS+S W KL++DAK R+C+H+AD+DKK
Sbjct: 823  GNVGFLSNRQRANVAMTRARYCLWILGNASTLANSDSIWRKLIVDAKRRDCYHNADDDKK 882

Query: 134  LAQAIEDALFEFELLYEPVSPFKKLSLRDKSDSAATSSR 18
            LA+ I+D LFE ELL E  S FKKLSL +K +   +SSR
Sbjct: 883  LARVIDDVLFEIELLEESESKFKKLSLCEKPEIDGSSSR 921


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