BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025480
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chlor...   438   e-121
ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatul...   434   e-119
ref|XP_003527651.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   423   e-116
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   346   4e-93
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]   343   2e-92

>ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Glycine
           max]
          Length = 450

 Score =  438 bits (1126), Expect = e-121
 Identities = 220/256 (85%), Positives = 239/256 (93%), Gaps = 3/256 (1%)
 Frame = +2

Query: 2   NLPNVEF-KEDALSDTEDSDDEFNSFCSQGSSCEGLHPRLSVAS--IRPGIVHRLDKGTS 172
           NLPNVEF K++ALSDTEDSDDEFNS+ S  SSCEGL+ RLSVAS  IRPGIVHRLDKGTS
Sbjct: 188 NLPNVEFSKDEALSDTEDSDDEFNSYISLASSCEGLNSRLSVASNSIRPGIVHRLDKGTS 247

Query: 173 GLLVVAKNEHSHVKLSEQFKLRTIKRVYVSLTAGVPSPIAGRVEVPIGRDLNNRIRMTAV 352
           GLLVVAK+EHSH+KLSEQFK RTIKR+YVSLTAGVP+P+AGRVEVP+GRD NNRIRMTAV
Sbjct: 248 GLLVVAKDEHSHMKLSEQFKQRTIKRLYVSLTAGVPTPVAGRVEVPVGRDTNNRIRMTAV 307

Query: 353 TGPVNSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYG 532
           TGPVNS KAR+AASRYKVIEILAGGSC+LVEWKLETGRTHQIRAHA+YLGVPLLGDE+YG
Sbjct: 308 TGPVNSKKARYAASRYKVIEILAGGSCSLVEWKLETGRTHQIRAHAKYLGVPLLGDELYG 367

Query: 533 GTKNMVFSLLRPRSPPSLHSEIVKMVSNLDRPCLHALTLGFQHPHTGKQVHFTCEPPVDF 712
           GTK+MV SLLRPR+P SLHS+IVKMVS LDRPCLHA TLGFQHPHTG+QVHF+CEPP DF
Sbjct: 368 GTKSMVLSLLRPRTPISLHSKIVKMVSRLDRPCLHAWTLGFQHPHTGEQVHFSCEPPADF 427

Query: 713 DEILSQLRRIGSERVS 760
            EILSQLRRIGSE VS
Sbjct: 428 AEILSQLRRIGSETVS 443


>ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355492867|gb|AES74070.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 465

 Score =  434 bits (1115), Expect = e-119
 Identities = 216/254 (85%), Positives = 234/254 (92%), Gaps = 1/254 (0%)
 Frame = +2

Query: 2   NLPNVEF-KEDALSDTEDSDDEFNSFCSQGSSCEGLHPRLSVASIRPGIVHRLDKGTSGL 178
           NLPNVEF KE+ALSDTEDSDDE N F SQ SS  GL  RLS+ASIRPGIVHRLDKGTSGL
Sbjct: 201 NLPNVEFSKEEALSDTEDSDDELNGFSSQSSSSVGLDSRLSMASIRPGIVHRLDKGTSGL 260

Query: 179 LVVAKNEHSHVKLSEQFKLRTIKRVYVSLTAGVPSPIAGRVEVPIGRDLNNRIRMTAVTG 358
           LVVAKNEHSH+KLSEQFKLRTIKRVYVSLTAGVP+P++GRVEVP+GRD NNR+RM AV G
Sbjct: 261 LVVAKNEHSHMKLSEQFKLRTIKRVYVSLTAGVPTPVSGRVEVPVGRDPNNRLRMIAVAG 320

Query: 359 PVNSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGT 538
            VNS+KARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHA+YLGVPLLGDEVYGGT
Sbjct: 321 LVNSVKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHAKYLGVPLLGDEVYGGT 380

Query: 539 KNMVFSLLRPRSPPSLHSEIVKMVSNLDRPCLHALTLGFQHPHTGKQVHFTCEPPVDFDE 718
           K+MV SLLRPR+ PSLHSE+ K VS LDRPCLHA TLGFQHPHTG+QVHF+CEPPVDF++
Sbjct: 381 KSMVLSLLRPRTTPSLHSEMFKTVSGLDRPCLHASTLGFQHPHTGEQVHFSCEPPVDFND 440

Query: 719 ILSQLRRIGSERVS 760
           ILSQLRRIGSE +S
Sbjct: 441 ILSQLRRIGSESIS 454


>ref|XP_003527651.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Glycine max]
          Length = 441

 Score =  423 bits (1088), Expect = e-116
 Identities = 215/257 (83%), Positives = 234/257 (91%), Gaps = 4/257 (1%)
 Frame = +2

Query: 2   NLPNVEF--KEDALSDTEDSDDEFNSFCSQGSSCEGLHPRLSVAS--IRPGIVHRLDKGT 169
           NLPNVEF  +E+ALSDTEDSDDEFNS+ S  S CEGL+ RLSVAS  IR GIVHRLDKGT
Sbjct: 179 NLPNVEFSKEEEALSDTEDSDDEFNSYRSLASFCEGLNSRLSVASNSIRSGIVHRLDKGT 238

Query: 170 SGLLVVAKNEHSHVKLSEQFKLRTIKRVYVSLTAGVPSPIAGRVEVPIGRDLNNRIRMTA 349
           SGL  VAK+EHSH+KLSEQFK  TIKR+YVSLTAG+P+P+AGRVEVP+GRD NNRIRMTA
Sbjct: 239 SGL-PVAKDEHSHMKLSEQFKQHTIKRIYVSLTAGLPTPVAGRVEVPVGRDPNNRIRMTA 297

Query: 350 VTGPVNSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVY 529
           V GPVNS KARHAASRYKVIEILAGGSC+LVEWKLETGRTHQIR +A+YLGVPLLGDEVY
Sbjct: 298 VAGPVNSRKARHAASRYKVIEILAGGSCSLVEWKLETGRTHQIRTYAKYLGVPLLGDEVY 357

Query: 530 GGTKNMVFSLLRPRSPPSLHSEIVKMVSNLDRPCLHALTLGFQHPHTGKQVHFTCEPPVD 709
           GGTKNMVFSLLRPR+P SLHS++VKMVS LDRPCLHALTLGFQHPHTG+QVHF+CEPP D
Sbjct: 358 GGTKNMVFSLLRPRTPISLHSKVVKMVSRLDRPCLHALTLGFQHPHTGEQVHFSCEPPAD 417

Query: 710 FDEILSQLRRIGSERVS 760
           F EILSQLRRIGSE VS
Sbjct: 418 FAEILSQLRRIGSETVS 434


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  346 bits (887), Expect = 4e-93
 Identities = 173/250 (69%), Positives = 202/250 (80%)
 Frame = +2

Query: 5   LPNVEFKEDALSDTEDSDDEFNSFCSQGSSCEGLHPRLSVASIRPGIVHRLDKGTSGLLV 184
           LPN + +ED +SD     DEFNSF + G +C          +IRPGIVHRLDKGTSGLLV
Sbjct: 189 LPNRDSEEDDISD-----DEFNSFAA-GQNCGTCE-----TNIRPGIVHRLDKGTSGLLV 237

Query: 185 VAKNEHSHVKLSEQFKLRTIKRVYVSLTAGVPSPIAGRVEVPIGRDLNNRIRMTAVTGPV 364
           VAK+EHSH  LSEQFKL +I RVY+SLT+GVP+P++GRVE+P+GRD NNRIRMTAV GP 
Sbjct: 238 VAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPS 297

Query: 365 NSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKN 544
           NS +ARHAASRYKVIEILA G  ALVEW+LETGRTHQIRAHA+YLG+PLLGDEVYGGTKN
Sbjct: 298 NSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKN 357

Query: 545 MVFSLLRPRSPPSLHSEIVKMVSNLDRPCLHALTLGFQHPHTGKQVHFTCEPPVDFDEIL 724
           M  SLLRPR P S H ++ ++VS LDRPCLHA+ LGF HP TGK VHF+C+PP DF EIL
Sbjct: 358 MALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEIL 417

Query: 725 SQLRRIGSER 754
           S LR+I +E+
Sbjct: 418 SWLRKISTEK 427


>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
          Length = 611

 Score =  343 bits (881), Expect = 2e-92
 Identities = 172/250 (68%), Positives = 201/250 (80%)
 Frame = +2

Query: 5    LPNVEFKEDALSDTEDSDDEFNSFCSQGSSCEGLHPRLSVASIRPGIVHRLDKGTSGLLV 184
            LPN + +ED + D     DEFNSF + G +C          +IRPGIVHRLDKGTSGLLV
Sbjct: 335  LPNRDSEEDDILD-----DEFNSFAA-GQNCGTCE-----TNIRPGIVHRLDKGTSGLLV 383

Query: 185  VAKNEHSHVKLSEQFKLRTIKRVYVSLTAGVPSPIAGRVEVPIGRDLNNRIRMTAVTGPV 364
            VAK+EHSH  LSEQFKL +I RVY+SLT+GVP+P++GRVE+P+GRD NNRIRMTAV GP 
Sbjct: 384  VAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPS 443

Query: 365  NSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKN 544
            NS +ARHAASRYKVIEILA G  ALVEW+LETGRTHQIRAHA+YLG+PLLGDEVYGGTKN
Sbjct: 444  NSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKN 503

Query: 545  MVFSLLRPRSPPSLHSEIVKMVSNLDRPCLHALTLGFQHPHTGKQVHFTCEPPVDFDEIL 724
            M  SLLRPR P S H ++ ++VS LDRPCLHA+ LGF HP TGK VHF+C+PP DF EIL
Sbjct: 504  MALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEIL 563

Query: 725  SQLRRIGSER 754
            S LR+I +E+
Sbjct: 564  SWLRKISTEK 573