BLASTX nr result

ID: Glycyrrhiza24_contig00025479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025479
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15940.3| unnamed protein product [Vitis vinifera]              286   2e-75
ref|XP_002278953.1| PREDICTED: U-box domain-containing protein 4...   286   2e-75
emb|CAN60531.1| hypothetical protein VITISV_005582 [Vitis vinifera]   286   2e-75
gb|AFN53678.1| U-box domain-containing protein [Linum usitatissi...   156   5e-36
ref|XP_001758822.1| predicted protein [Physcomitrella patens sub...   146   5e-33

>emb|CBI15940.3| unnamed protein product [Vitis vinifera]
          Length = 1052

 Score =  286 bits (733), Expect = 2e-75
 Identities = 151/247 (61%), Positives = 194/247 (78%), Gaps = 1/247 (0%)
 Frame = -3

Query: 739  SNARFSHTASGMQEGLLGLLLHFTRNLDQQTLNVVRENHLMSIFCEQLDYTSKPKAKQLA 560
            +N R + ++S ++EGLLGLLLHFT++ D QT++VV+E+ LM+IF EQL++  KP+ KQLA
Sbjct: 771  TNWRTTRSSSCLEEGLLGLLLHFTQSPDPQTVSVVKEHSLMNIFREQLNFPLKPRVKQLA 830

Query: 559  SIGLKNLSEFGRSVTAT-DSEVPSSSGFSCSLVFMCGRASNKPSTCPIHNSPCEEDSELC 383
            ++GLKNLSE  R++ +T D EV  S GF  SLVFMCG+   +   C IHN  CEED++ C
Sbjct: 831  ALGLKNLSESRRTLISTGDLEVQLSHGFCSSLVFMCGKRPPELPVCAIHNVSCEEDNQFC 890

Query: 382  LLKSNCVKPLVDILNDNDTNVQIAAVEALSTLVVDYTSPSFKRVVDELEKLGAVDSLITL 203
            LL+SNC+KPLVD+L D DTNVQIAAVEALSTLV+D TS +FKR VDELE LG V++ ITL
Sbjct: 891  LLRSNCIKPLVDLLTDEDTNVQIAAVEALSTLVID-TSNNFKRAVDELEHLGVVEAAITL 949

Query: 202  FTRVRSEELREKTIWMLEKILRVDHTLSHRHALNQSLVRGLVEAFKHGNTNTKKHAQEAL 23
            FT VR   L+E+ +WM+E+ILRV+  + +RH+LNQSLVR LVEAFKHGN N K +AQ+AL
Sbjct: 950  FTEVRPGILQERLLWMIERILRVESDI-NRHSLNQSLVRALVEAFKHGNANAKGYAQDAL 1008

Query: 22   ALLKQLS 2
              LKQLS
Sbjct: 1009 TNLKQLS 1015


>ref|XP_002278953.1| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 1029

 Score =  286 bits (733), Expect = 2e-75
 Identities = 151/247 (61%), Positives = 194/247 (78%), Gaps = 1/247 (0%)
 Frame = -3

Query: 739  SNARFSHTASGMQEGLLGLLLHFTRNLDQQTLNVVRENHLMSIFCEQLDYTSKPKAKQLA 560
            +N R + ++S ++EGLLGLLLHFT++ D QT++VV+E+ LM+IF EQL++  KP+ KQLA
Sbjct: 771  TNWRTTRSSSCLEEGLLGLLLHFTQSPDPQTVSVVKEHSLMNIFREQLNFPLKPRVKQLA 830

Query: 559  SIGLKNLSEFGRSVTAT-DSEVPSSSGFSCSLVFMCGRASNKPSTCPIHNSPCEEDSELC 383
            ++GLKNLSE  R++ +T D EV  S GF  SLVFMCG+   +   C IHN  CEED++ C
Sbjct: 831  ALGLKNLSESRRTLISTGDLEVQLSHGFCSSLVFMCGKRPPELPVCAIHNVSCEEDNQFC 890

Query: 382  LLKSNCVKPLVDILNDNDTNVQIAAVEALSTLVVDYTSPSFKRVVDELEKLGAVDSLITL 203
            LL+SNC+KPLVD+L D DTNVQIAAVEALSTLV+D TS +FKR VDELE LG V++ ITL
Sbjct: 891  LLRSNCIKPLVDLLTDEDTNVQIAAVEALSTLVID-TSNNFKRAVDELEHLGVVEAAITL 949

Query: 202  FTRVRSEELREKTIWMLEKILRVDHTLSHRHALNQSLVRGLVEAFKHGNTNTKKHAQEAL 23
            FT VR   L+E+ +WM+E+ILRV+  + +RH+LNQSLVR LVEAFKHGN N K +AQ+AL
Sbjct: 950  FTEVRPGILQERLLWMIERILRVESDI-NRHSLNQSLVRALVEAFKHGNANAKGYAQDAL 1008

Query: 22   ALLKQLS 2
              LKQLS
Sbjct: 1009 TNLKQLS 1015


>emb|CAN60531.1| hypothetical protein VITISV_005582 [Vitis vinifera]
          Length = 1105

 Score =  286 bits (733), Expect = 2e-75
 Identities = 151/247 (61%), Positives = 194/247 (78%), Gaps = 1/247 (0%)
 Frame = -3

Query: 739  SNARFSHTASGMQEGLLGLLLHFTRNLDQQTLNVVRENHLMSIFCEQLDYTSKPKAKQLA 560
            +N R + ++S ++EGLLGLLLHFT++ D QT++VV+E+ LM+IF EQL++  KP+ KQLA
Sbjct: 771  TNWRTTRSSSCLEEGLLGLLLHFTQSPDXQTVSVVKEHSLMNIFREQLNFPLKPRVKQLA 830

Query: 559  SIGLKNLSEFGRSVTAT-DSEVPSSSGFSCSLVFMCGRASNKPSTCPIHNSPCEEDSELC 383
            ++GLKNLSE  R++ +T D EV  S GF  SLVFMCG+   +   C IHN  CEED++ C
Sbjct: 831  ALGLKNLSESRRTLISTGDLEVQLSHGFCSSLVFMCGKRPPELPVCAIHNVSCEEDNQFC 890

Query: 382  LLKSNCVKPLVDILNDNDTNVQIAAVEALSTLVVDYTSPSFKRVVDELEKLGAVDSLITL 203
            LL+SNC+KPLVD+L D DTNVQIAAVEALSTLV+D TS +FKR VDELE LG V++ ITL
Sbjct: 891  LLRSNCIKPLVDLLTDEDTNVQIAAVEALSTLVID-TSNNFKRAVDELEHLGVVEAAITL 949

Query: 202  FTRVRSEELREKTIWMLEKILRVDHTLSHRHALNQSLVRGLVEAFKHGNTNTKKHAQEAL 23
            FT VR   L+E+ +WM+E+ILRV+  + +RH+LNQSLVR LVEAFKHGN N K +AQ+AL
Sbjct: 950  FTEVRPGILQERLLWMIERILRVESDI-NRHSLNQSLVRALVEAFKHGNANAKGYAQDAL 1008

Query: 22   ALLKQLS 2
              LKQLS
Sbjct: 1009 TNLKQLS 1015


>gb|AFN53678.1| U-box domain-containing protein [Linum usitatissimum]
          Length = 719

 Score =  156 bits (394), Expect = 5e-36
 Identities = 93/220 (42%), Positives = 135/220 (61%), Gaps = 21/220 (9%)
 Frame = -3

Query: 637  VRENHLMSIFCEQLDYTSKPKAKQLASIGLKNLSEFGRSVTATDSEVPSSSGFSCSLVFM 458
            V+   ++S   + L   S P    +  I L  ++   R+  +  S + SS+G    + ++
Sbjct: 496  VQSASVVSSLLQLLSVASSPAQASILQI-LYGIASSPRAAESVASRIKSSNGIKTVISYL 554

Query: 457  ------------------CGRASNKPSTCPIHN--SPCEEDSELCLLKSNCVKPLVDILN 338
                                R  ++PSTCPIHN  S  +E S+LCLL ++C+KPL+D+L+
Sbjct: 555  EHPEVGHRINAFRLTRLLSERVPSEPSTCPIHNEFSCDDEGSQLCLLSNDCIKPLIDLLS 614

Query: 337  DNDTNVQIAAVEALSTLV-VDYTSPSFKRVVDELEKLGAVDSLITLFTRVRSEELREKTI 161
            D++TNVQIAAVEALSTLV  D +S   KR ++E E+L  VD++I LF ++R  EL+EKT+
Sbjct: 615  DDNTNVQIAAVEALSTLVPADNSSEITKRGMNEFEQLRMVDAVIDLFMKLRPGELQEKTL 674

Query: 160  WMLEKILRVDHTLSHRHALNQSLVRGLVEAFKHGNTNTKK 41
            WM++K LR +   SHRH+LNQ+LV  LVEA KHGN NTK+
Sbjct: 675  WMVDKFLRAE-GCSHRHSLNQALVGALVEALKHGNGNTKR 713


>ref|XP_001758822.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162689959|gb|EDQ76328.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 826

 Score =  146 bits (368), Expect = 5e-33
 Identities = 87/238 (36%), Positives = 143/238 (60%), Gaps = 4/238 (1%)
 Frame = -3

Query: 706  MQEGLLGLLLHFTRNLDQQTLNVVRENHLMSIFCEQ-LDYTSKPKAKQLASIGLKNLSEF 530
            MQE L+G+LLHF RN + + LN +R+ HL++IF E+ ++++  P  K+ A++GL++LS+ 
Sbjct: 573  MQEALMGILLHFARNSNVKILNTMRQLHLLTIFKEKVMEHSWTPLIKERAALGLQHLSQR 632

Query: 529  GRSVTATDSEVPSSSGFSCSL---VFMCGRASNKPSTCPIHNSPCEEDSELCLLKSNCVK 359
                T   S  P +S    S    +F      + P  C +H   C+ +   CL+ +  V 
Sbjct: 633  AHLFTLRGSP-PQASRRRPSFGLCMFPSKTIRDLPEKCDVHGGLCDPNRAFCLVAARAVA 691

Query: 358  PLVDILNDNDTNVQIAAVEALSTLVVDYTSPSFKRVVDELEKLGAVDSLITLFTRVRSEE 179
            PL+++L D D  ++ AA+ ALSTL++D      K  V+EL +   V  ++ LF  VR   
Sbjct: 692  PLIELLEDEDNAIREAALGALSTLLMD--GVDAKAGVEELIRAEGVQPILNLFYSVREGR 749

Query: 178  LREKTIWMLEKILRVDHTLSHRHALNQSLVRGLVEAFKHGNTNTKKHAQEALALLKQL 5
            L+E+T+WM+E+ILRV+   +  +A +Q L++ L++A  HG+ NT   AQ+ALA L+Q+
Sbjct: 750  LQERTVWMIERILRVEQ-YAQGYATDQGLLKVLMDAMIHGHPNTSLIAQQALASLQQI 806


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