BLASTX nr result

ID: Glycyrrhiza24_contig00025478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025478
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615959.1| RING finger protein [Medicago truncatula] gi...   261   5e-68
ref|XP_003518333.1| PREDICTED: E3 ubiquitin-protein ligase liste...   249   2e-64
ref|XP_002517743.1| conserved hypothetical protein [Ricinus comm...   155   5e-36
ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   150   1e-34
ref|XP_004162713.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   141   7e-32

>ref|XP_003615959.1| RING finger protein [Medicago truncatula]
           gi|355517294|gb|AES98917.1| RING finger protein
           [Medicago truncatula]
          Length = 1683

 Score =  261 bits (667), Expect = 5e-68
 Identities = 136/183 (74%), Positives = 146/183 (79%), Gaps = 5/183 (2%)
 Frame = +3

Query: 3   DSPDTVKLLSVAVSIFGPQKMVQEVFNQNRGHYSSQLSNDGDKVLEAEDFMQIFKDIFVP 182
           DS +TVKLLSVAVSIFGPQK VQEVFNQ RGH SSQLS  GD++LEAE+F+QIFK+ FVP
Sbjct: 406 DSANTVKLLSVAVSIFGPQKTVQEVFNQKRGHCSSQLSYGGDELLEAEEFLQIFKNTFVP 465

Query: 183 WCLQANSFSTNARXXXXXXXXXXEYFSEQWSFIVNYVISHS-----AGLTDSDHTAMLAM 347
           WCLQ NS STNAR           +FSEQWSFIVN VI+ S     AGL +SD TAM AM
Sbjct: 466 WCLQPNSSSTNARLDLLLTLLDDRHFSEQWSFIVNCVINQSNSGCPAGLINSDQTAMFAM 525

Query: 348 LLEKARDESMKRKARDDSSYRPGTNAEDWHHECLESSAIAVSRSLPPFSTSHVQFMRSLL 527
           LLEKARDESMKRK RD SSYRPG NAEDWHHECLES AIA S SLPP+STSHVQFM SLL
Sbjct: 526 LLEKARDESMKRKVRDGSSYRPGANAEDWHHECLESYAIAASHSLPPYSTSHVQFMCSLL 585

Query: 528 GGS 536
           GGS
Sbjct: 586 GGS 588


>ref|XP_003518333.1| PREDICTED: E3 ubiquitin-protein ligase listerin-like [Glycine max]
          Length = 1885

 Score =  249 bits (636), Expect = 2e-64
 Identities = 129/184 (70%), Positives = 148/184 (80%), Gaps = 5/184 (2%)
 Frame = +3

Query: 3    DSPDTVKLLSVAVSIFGPQKMVQEVFNQNRGHYSSQLSNDGDKVLEAEDFMQIFKDIFVP 182
            DSPD V+LLSVAVSIFGP+ ++QEV  +NR +Y+SQLS DGD V EAEDFMQIFK++FVP
Sbjct: 598  DSPDAVRLLSVAVSIFGPRMIIQEVLIKNRENYASQLSYDGDNVGEAEDFMQIFKNVFVP 657

Query: 183  WCLQANSFSTNARXXXXXXXXXXEYFSEQWSFIVNYVI--SHS---AGLTDSDHTAMLAM 347
            WCLQ+NS ST+AR          EYFSEQWSFI+NYVI  SHS    GL D+DH + LA 
Sbjct: 658  WCLQSNSCSTSARLDLLLALLDDEYFSEQWSFIINYVIGQSHSELQPGLLDADHASTLAT 717

Query: 348  LLEKARDESMKRKARDDSSYRPGTNAEDWHHECLESSAIAVSRSLPPFSTSHVQFMRSLL 527
            LLEKARD+ MKRK +DDSS+R G NA+DWHHE LESSAIAVSRSLPPFSTSHVQF+ SLL
Sbjct: 718  LLEKARDDRMKRKVKDDSSHRMGCNAKDWHHEYLESSAIAVSRSLPPFSTSHVQFICSLL 777

Query: 528  GGST 539
            GG T
Sbjct: 778  GGLT 781


>ref|XP_002517743.1| conserved hypothetical protein [Ricinus communis]
            gi|223543141|gb|EEF44675.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1912

 Score =  155 bits (391), Expect = 5e-36
 Identities = 86/184 (46%), Positives = 117/184 (63%), Gaps = 6/184 (3%)
 Frame = +3

Query: 3    DSPDTVKLLSVAVSIFGPQKMVQEVFNQNRGHY-SSQLSNDGDKVLEAEDFMQIFKDIFV 179
            D+ D ++LLSVAVS+FGP+K+V+E+F  N G   SS L +D DK LE E FMQ+F++ F+
Sbjct: 602  DTTDGLRLLSVAVSLFGPRKIVRELFLGNEGSQCSSSLYDDRDKELEPEYFMQVFRETFI 661

Query: 180  PWCLQANSFSTNARXXXXXXXXXXEYFSEQWSFIVNYVISHSAGLTD-----SDHTAMLA 344
             WCL   + S++AR          E F EQWS +++Y IS     T+     S++  +LA
Sbjct: 662  LWCLAGCNSSSSARLDLLLALLNDESFPEQWSAVISYAISQGGTRTEPVSLESNYLPLLA 721

Query: 345  MLLEKARDESMKRKARDDSSYRPGTNAEDWHHECLESSAIAVSRSLPPFSTSHVQFMRSL 524
            MLLEKAR E  KRK RDDS +    N  DWHHE LES+ +AV+RS   +  S  QF+ ++
Sbjct: 722  MLLEKARVEIAKRKVRDDSHHPHWLNLGDWHHELLESAVVAVARSCFTYRASAAQFVCAV 781

Query: 525  LGGS 536
            LGGS
Sbjct: 782  LGGS 785


>ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            listerin-like [Vitis vinifera]
          Length = 1923

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/182 (41%), Positives = 114/182 (62%), Gaps = 5/182 (2%)
 Frame = +3

Query: 6    SPDTVKLLSVAVSIFGPQKMVQEVFNQNRGHYSSQLSNDGDKVLEAEDFMQIFKDIFVPW 185
            SPD V+L SVAVS+FGP+K++QE+   N+      LS+DG + L  EDF+Q+FK++F PW
Sbjct: 620  SPDAVRLFSVAVSVFGPRKIIQELIC-NKALSFGHLSHDGGEKLGQEDFLQVFKELFTPW 678

Query: 186  CLQANSFSTNARXXXXXXXXXXEYFSEQWSFIVNYVISHSA-----GLTDSDHTAMLAML 350
            CL  +  S +A+          E F+EQW  ++ Y           G  DS+  A+LA+L
Sbjct: 679  CLLGHDSSISAQLDLLLALFEDESFAEQWCMVITYATKLECCGAKPGSLDSNQIAVLAIL 738

Query: 351  LEKARDESMKRKARDDSSYRPGTNAEDWHHECLESSAIAVSRSLPPFSTSHVQFMRSLLG 530
            +EKAR++  KRK   D ++  G   + WHHE L+ +A++V+ SLPP+ TS  +F+R++LG
Sbjct: 739  MEKAREKLKKRKVGVDFNHHQGCQPDHWHHELLDLAAVSVACSLPPYGTSDSRFIRAVLG 798

Query: 531  GS 536
            GS
Sbjct: 799  GS 800


>ref|XP_004162713.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            listerin-like [Cucumis sativus]
          Length = 1755

 Score =  141 bits (355), Expect = 7e-32
 Identities = 77/183 (42%), Positives = 112/183 (61%), Gaps = 5/183 (2%)
 Frame = +3

Query: 3    DSPDTVKLLSVAVSIFGPQKMVQEVFNQNRGHYSSQLSNDGDKVLEAEDFMQIFKDIFVP 182
            DS D V+LLS AVS+FGP+K+VQE+F  N G  S++ S    + LEA  FMQ+F D+FVP
Sbjct: 614  DSSDGVRLLSAAVSVFGPRKIVQELFINNNGMSSTEFSGVEAQDLEARQFMQVFNDVFVP 673

Query: 183  WCLQANSFSTNARXXXXXXXXXXEYFSEQWSFIVNYV--ISHSAGLTD---SDHTAMLAM 347
            WCLQ N+ S++AR          E+FS+QW  I++Y   + H+  + +   S+  A+LA 
Sbjct: 674  WCLQGNNSSSSARLDLLLALIDDEHFSDQWHSIISYSTNLDHTEVVLESMNSESLAVLAK 733

Query: 348  LLEKARDESMKRKARDDSSYRPGTNAEDWHHECLESSAIAVSRSLPPFSTSHVQFMRSLL 527
            LL + R +     AR  +      N  +WHHE LES+A+A+++S  P  +S   F+ S+L
Sbjct: 734  LLNRVRGKITNSDARKVTHTWQRANLGNWHHEHLESAAVAIAQSHSPIRSSFTDFVCSVL 793

Query: 528  GGS 536
            GGS
Sbjct: 794  GGS 796


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