BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025448
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535613.1| PREDICTED: DNA-directed RNA polymerase III s...   161   6e-38
ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III s...   158   4e-37
ref|XP_003592281.1| DNA-directed RNA polymerase III subunit RPC3...   123   2e-26
ref|XP_003592280.1| DNA-directed RNA polymerase III subunit RPC3...   123   2e-26
ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polyp...   109   3e-22

>ref|XP_003535613.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           [Glycine max]
          Length = 510

 Score =  161 bits (407), Expect = 6e-38
 Identities = 84/116 (72%), Positives = 94/116 (81%)
 Frame = +2

Query: 2   PEAVISKPVDEEKNTRKRGAKSAKKFEAPETIEQCVIEAAVPGEAIRFLLTADTGCNADR 181
           PE V+S    +E  TRKRGAKSAK FEAPET+EQ V++AAVPG+ IRF L ADT C+ DR
Sbjct: 161 PEPVVSTSF-KETTTRKRGAKSAKIFEAPETLEQRVVDAAVPGDVIRFSLAADTRCSVDR 219

Query: 182 ETNSDDSQMISVGENDAKEESTLWRANFEEFIRYLRHKVLIENVRTRMDDGAATVL 349
           ETNSDD+QMISV E  AKE   LWRANFEEFIR+LRHKVLIENVRT+ DDG ATVL
Sbjct: 220 ETNSDDAQMISVEEEVAKEGQILWRANFEEFIRHLRHKVLIENVRTQHDDGTATVL 275


>ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           [Glycine max]
          Length = 518

 Score =  158 bits (400), Expect = 4e-37
 Identities = 83/116 (71%), Positives = 94/116 (81%)
 Frame = +2

Query: 2   PEAVISKPVDEEKNTRKRGAKSAKKFEAPETIEQCVIEAAVPGEAIRFLLTADTGCNADR 181
           PE V+S    +E  T+KRGAKSAK FEAPET+EQ V++AAVPG+ IRF LTA+ G N DR
Sbjct: 169 PEPVVSTSF-KETTTKKRGAKSAKIFEAPETLEQRVVDAAVPGDVIRFSLTANMGSNVDR 227

Query: 182 ETNSDDSQMISVGENDAKEESTLWRANFEEFIRYLRHKVLIENVRTRMDDGAATVL 349
           ETNSDD  MISV E+ AKEE  LWRANFEEFIR+LRHKVLIENVRT+ DDG ATVL
Sbjct: 228 ETNSDDVPMISVEEDVAKEEQILWRANFEEFIRHLRHKVLIENVRTQHDDGTATVL 283


>ref|XP_003592281.1| DNA-directed RNA polymerase III subunit RPC3 [Medicago truncatula]
           gi|355481329|gb|AES62532.1| DNA-directed RNA polymerase
           III subunit RPC3 [Medicago truncatula]
          Length = 505

 Score =  123 bits (308), Expect = 2e-26
 Identities = 71/116 (61%), Positives = 80/116 (68%)
 Frame = +2

Query: 2   PEAVISKPVDEEKNTRKRGAKSAKKFEAPETIEQCVIEAAVPGEAIRFLLTADTGCNADR 181
           PEA I +   ++K  R    K A+ F+ PE  E  V+EAA  G+ IRF LTA TGC++D 
Sbjct: 164 PEAKIVEEKGDDKKGRSTSNKKARVFKVPE--EHRVVEAAKRGDMIRFSLTAYTGCSSDG 221

Query: 182 ETNSDDSQMISVGENDAKEESTLWRANFEEFIRYLRHKVLIENVRTRMDDGAATVL 349
           ET   D   ISV EN AKEES LWRANFEEFIRYLR K LIENVR RMDDGAATVL
Sbjct: 222 ETKLAD---ISVAENVAKEESFLWRANFEEFIRYLRDKALIENVRARMDDGAATVL 274


>ref|XP_003592280.1| DNA-directed RNA polymerase III subunit RPC3 [Medicago truncatula]
           gi|355481328|gb|AES62531.1| DNA-directed RNA polymerase
           III subunit RPC3 [Medicago truncatula]
          Length = 468

 Score =  123 bits (308), Expect = 2e-26
 Identities = 71/116 (61%), Positives = 80/116 (68%)
 Frame = +2

Query: 2   PEAVISKPVDEEKNTRKRGAKSAKKFEAPETIEQCVIEAAVPGEAIRFLLTADTGCNADR 181
           PEA I +   ++K  R    K A+ F+ PE  E  V+EAA  G+ IRF LTA TGC++D 
Sbjct: 164 PEAKIVEEKGDDKKGRSTSNKKARVFKVPE--EHRVVEAAKRGDMIRFSLTAYTGCSSDG 221

Query: 182 ETNSDDSQMISVGENDAKEESTLWRANFEEFIRYLRHKVLIENVRTRMDDGAATVL 349
           ET   D   ISV EN AKEES LWRANFEEFIRYLR K LIENVR RMDDGAATVL
Sbjct: 222 ETKLAD---ISVAENVAKEESFLWRANFEEFIRYLRDKALIENVRARMDDGAATVL 274


>ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polypeptide, putative
           [Ricinus communis] gi|223549895|gb|EEF51382.1|
           DNA-directed RNA polymerase III 62 kDa polypeptide,
           putative [Ricinus communis]
          Length = 485

 Score =  109 bits (272), Expect = 3e-22
 Identities = 59/115 (51%), Positives = 74/115 (64%)
 Frame = +2

Query: 5   EAVISKPVDEEKNTRKRGAKSAKKFEAPETIEQCVIEAAVPGEAIRFLLTADTGCNADRE 184
           E V++ P +EE   +KR AKSAK     ET+EQ V+  AVP +A RF +  DT    D E
Sbjct: 161 EPVLAPPTEEEDRAKKRSAKSAKIVIESETLEQRVLAVAVPMDAKRFSVDLDTELKDDAE 220

Query: 185 TNSDDSQMISVGENDAKEESTLWRANFEEFIRYLRHKVLIENVRTRMDDGAATVL 349
            + + S    VG+  A+++  LWRANFEEFIR LRHK  IENVR R+DDGAA VL
Sbjct: 221 NDQNKSSDKHVGDKVAEDQVVLWRANFEEFIRRLRHKACIENVRGRLDDGAAIVL 275