BLASTX nr result

ID: Glycyrrhiza24_contig00025430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025430
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545320.1| PREDICTED: pentatricopeptide repeat-containi...   211   5e-53
ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containi...   210   8e-53
ref|XP_003597701.1| Pentatricopeptide repeat-containing protein ...   209   2e-52
ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...   193   1e-47
emb|CBI20026.3| unnamed protein product [Vitis vinifera]              192   2e-47

>ref|XP_003545320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 559

 Score =  211 bits (537), Expect = 5e-53
 Identities = 99/113 (87%), Positives = 105/113 (92%)
 Frame = -2

Query: 339 GPFDTVVDGANVGLANMHKFSFSQLNSVVQQLRQMSPSKRLPLIILHVNRVTGGPAQSPN 160
           GPFD VVDGANVGLAN H FSFSQLN+VV+QLRQ+SPSKRLPLIILH++RV GGPAQ+P 
Sbjct: 365 GPFDAVVDGANVGLANGHNFSFSQLNTVVEQLRQISPSKRLPLIILHISRVRGGPAQNPK 424

Query: 159 NRILIENWKNNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLG 1
           N  LIENWK NGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLG
Sbjct: 425 NMRLIENWKKNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLG 477


>ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  210 bits (535), Expect = 8e-53
 Identities = 98/113 (86%), Positives = 105/113 (92%)
 Frame = -2

Query: 339 GPFDTVVDGANVGLANMHKFSFSQLNSVVQQLRQMSPSKRLPLIILHVNRVTGGPAQSPN 160
           GPFD VVDGANVGLAN H FSFSQLN+VV+QLRQ+SPSKRLPLIILH++RV GGPAQ+P 
Sbjct: 366 GPFDAVVDGANVGLANGHNFSFSQLNTVVEQLRQISPSKRLPLIILHISRVHGGPAQNPK 425

Query: 159 NRILIENWKNNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLG 1
           N+ LIENWK NG LYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLG
Sbjct: 426 NKRLIENWKKNGVLYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLG 478


>ref|XP_003597701.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355486749|gb|AES67952.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 558

 Score =  209 bits (532), Expect = 2e-52
 Identities = 98/113 (86%), Positives = 105/113 (92%)
 Frame = -2

Query: 339 GPFDTVVDGANVGLANMHKFSFSQLNSVVQQLRQMSPSKRLPLIILHVNRVTGGPAQSPN 160
           GPFD VVDGANVGLAN+ +FSF QL+ VV+QLRQ+SPSKRLPLIILHVNRVTGGPAQ+PN
Sbjct: 376 GPFDAVVDGANVGLANIAEFSFKQLDYVVRQLRQLSPSKRLPLIILHVNRVTGGPAQNPN 435

Query: 159 NRILIENWKNNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLG 1
           N+ LIENWK NG LYATP GSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLG
Sbjct: 436 NKRLIENWKKNGVLYATPHGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLG 488


>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223534642|gb|EEF36338.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 589

 Score =  193 bits (490), Expect = 1e-47
 Identities = 90/113 (79%), Positives = 99/113 (87%)
 Frame = -2

Query: 339 GPFDTVVDGANVGLANMHKFSFSQLNSVVQQLRQMSPSKRLPLIILHVNRVTGGPAQSPN 160
           GPFD V+DGAN+GL N   FSF QLN+VV +LRQMSPSKRLPLIILH +RVTGGPAQ+PN
Sbjct: 407 GPFDAVIDGANLGLINQTNFSFRQLNTVVSKLRQMSPSKRLPLIILHRSRVTGGPAQNPN 466

Query: 159 NRILIENWKNNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLG 1
           N  L+E WK +GALYATP GSNDDWYWLYAAVSC CLL+TNDEMRDHLFQLLG
Sbjct: 467 NMKLLEFWKKSGALYATPTGSNDDWYWLYAAVSCNCLLVTNDEMRDHLFQLLG 519


>emb|CBI20026.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  192 bits (489), Expect = 2e-47
 Identities = 89/113 (78%), Positives = 100/113 (88%)
 Frame = -2

Query: 339 GPFDTVVDGANVGLANMHKFSFSQLNSVVQQLRQMSPSKRLPLIILHVNRVTGGPAQSPN 160
           GPFD VVDGANV L N   FSF +LNSVV +LRQ+SPSKRLPL+ILH +RVTGGPAQ+PN
Sbjct: 152 GPFDAVVDGANVSLINQKSFSFFELNSVVNRLRQISPSKRLPLVILHRSRVTGGPAQNPN 211

Query: 159 NRILIENWKNNGALYATPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLG 1
           N+ LIE+WK +GALYATP GSNDDWYWLYAAV+C CLL+TNDEMRDHLFQLLG
Sbjct: 212 NKKLIESWKKSGALYATPAGSNDDWYWLYAAVNCNCLLVTNDEMRDHLFQLLG 264


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