BLASTX nr result

ID: Glycyrrhiza24_contig00025422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025422
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35687.1| unknown [Medicago truncatula]                          181   5e-44
ref|XP_003555110.1| PREDICTED: DNA-directed RNA polymerases I an...   179   3e-43
ref|XP_003621619.1| DNA-directed RNA polymerases I and III subun...   179   3e-43
ref|XP_003600908.1| DNA-directed RNA polymerases I and III subun...   176   2e-42
ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycin...   176   2e-42

>gb|AFK35687.1| unknown [Medicago truncatula]
          Length = 115

 Score =  181 bits (460), Expect = 5e-44
 Identities = 85/99 (85%), Positives = 91/99 (91%)
 Frame = -3

Query: 468 MEHGSYSDQSKSTFSLVDEDHTFANSVRFTLNQDPRVIFCGYNIPHPSENRVNIRVQTTG 289
           MEHGSYSD SKSTFSLVDEDHTFANSVRFTLNQDPRV FCGY+IPHPSENRVN+RVQTTG
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 60

Query: 288 DTAREVLKDGCQDLMIMCQHVRSTFNEAVNDFRRTKDSR 172
           D A EVLKDGCQDLM+MCQHVRSTF +AVNDF+ +K  R
Sbjct: 61  DPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTSKSVR 99


>ref|XP_003555110.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC2-like [Glycine max]
          Length = 106

 Score =  179 bits (454), Expect = 3e-43
 Identities = 84/96 (87%), Positives = 91/96 (94%)
 Frame = -3

Query: 468 MEHGSYSDQSKSTFSLVDEDHTFANSVRFTLNQDPRVIFCGYNIPHPSENRVNIRVQTTG 289
           ME GSYSDQSKSTFSLVDEDHTFANSVRFTLNQDPRV FCGY+IPHPS+NRVNIRVQTTG
Sbjct: 1   MELGSYSDQSKSTFSLVDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSDNRVNIRVQTTG 60

Query: 288 DTAREVLKDGCQDLMIMCQHVRSTFNEAVNDFRRTK 181
           D AREVLKDGCQDLM+MCQHVRSTF+ A+ DF+RT+
Sbjct: 61  DPAREVLKDGCQDLMLMCQHVRSTFDNAMTDFKRTQ 96


>ref|XP_003621619.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Medicago
           truncatula] gi|355496634|gb|AES77837.1| DNA-directed RNA
           polymerases I and III subunit RPAC2 [Medicago
           truncatula]
          Length = 115

 Score =  179 bits (454), Expect = 3e-43
 Identities = 84/99 (84%), Positives = 90/99 (90%)
 Frame = -3

Query: 468 MEHGSYSDQSKSTFSLVDEDHTFANSVRFTLNQDPRVIFCGYNIPHPSENRVNIRVQTTG 289
           MEHGSYSD SKSTFSLVDEDHTFANSVRF LNQDPRV FCGY+IPHPSENRVN+RVQTTG
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFILNQDPRVTFCGYSIPHPSENRVNVRVQTTG 60

Query: 288 DTAREVLKDGCQDLMIMCQHVRSTFNEAVNDFRRTKDSR 172
           D A EVLKDGCQDLM+MCQHVRSTF +AVNDF+ +K  R
Sbjct: 61  DPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTSKSVR 99


>ref|XP_003600908.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Medicago
           truncatula] gi|355489956|gb|AES71159.1| DNA-directed RNA
           polymerases I and III subunit RPAC2 [Medicago
           truncatula]
          Length = 218

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/99 (82%), Positives = 90/99 (90%)
 Frame = -3

Query: 468 MEHGSYSDQSKSTFSLVDEDHTFANSVRFTLNQDPRVIFCGYNIPHPSENRVNIRVQTTG 289
           MEHG YSD SKSTFSLV+EDHTF+NSVRFTLNQDPRV FCGY+IPHPSENRVN+RVQTTG
Sbjct: 104 MEHGLYSDLSKSTFSLVNEDHTFSNSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 163

Query: 288 DTAREVLKDGCQDLMIMCQHVRSTFNEAVNDFRRTKDSR 172
           D A EVLKDGCQDLM+MCQHVRSTF +AVNDF+ +K  R
Sbjct: 164 DPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTSKSVR 202



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = -3

Query: 468 MEHGSYSDQSKSTFSLVDEDHTFANSVRFTLNQD 367
           MEHGSYSD SKSTFSLVDEDHTFANSVRFTLNQD
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFTLNQD 34


>ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycine max]
           gi|255630968|gb|ACU15848.1| unknown [Glycine max]
          Length = 107

 Score =  176 bits (446), Expect = 2e-42
 Identities = 81/96 (84%), Positives = 92/96 (95%)
 Frame = -3

Query: 468 MEHGSYSDQSKSTFSLVDEDHTFANSVRFTLNQDPRVIFCGYNIPHPSENRVNIRVQTTG 289
           MEHGSY+DQSKSTFSLVDEDHTFAN+VRFTLNQDPRV FCGY+IPHPS+NRVNIRVQTTG
Sbjct: 1   MEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTTG 60

Query: 288 DTAREVLKDGCQDLMIMCQHVRSTFNEAVNDFRRTK 181
           D +REVLKD CQDLM+MCQHVRSTF++AV+DF+ +K
Sbjct: 61  DPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKISK 96


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