BLASTX nr result

ID: Glycyrrhiza24_contig00025421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025421
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein lig...   119   2e-25
gb|ABN06170.1| Regulator of chromosome condensation/beta-lactama...   103   2e-20
ref|XP_002866399.1| regulator of chromosome condensation family ...    88   8e-16
ref|NP_200895.2| regulator of chromosome condensation repeat-con...    85   7e-15
ref|XP_002510629.1| guanine nucleotide exchange factor P532, put...    82   4e-14

>ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 444

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/86 (70%), Positives = 67/86 (77%)
 Frame = -1

Query: 260 RHRIASLTHRLXXXXXXXXSRTTKTPTLYTADTPNDAAATIQLLSWGKGASGQLGGGVEE 81
           RHR+A+LTHRL          T K P LYTADT  DA AT+Q+LSWGKGASGQLGGGVEE
Sbjct: 7   RHRLATLTHRLRHSSAAAA--TPKPPILYTADTTADATATLQVLSWGKGASGQLGGGVEE 64

Query: 80  VRLYPSPVANLVVPKSSFSLYRTPGR 3
            RLYPSPVANL VPKSSF+L +TPGR
Sbjct: 65  TRLYPSPVANLAVPKSSFALSQTPGR 90


>gb|ABN06170.1| Regulator of chromosome condensation/beta-lactamase-inhibitor
           protein II [Medicago truncatula]
          Length = 444

 Score =  103 bits (256), Expect = 2e-20
 Identities = 57/88 (64%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
 Frame = -1

Query: 266 RHRHRIASLTHRLXXXXXXXXSRTTKTPTLYTADTPNDAAATIQLLSWGKGASGQLGGGV 87
           RHR RI++LTHRL          TTKT TLYT DTP+    T+QLLSWGKGASGQLGGGV
Sbjct: 8   RHRRRISTLTHRLYSSFSTTT--TTKTSTLYTTDTPDPT--TVQLLSWGKGASGQLGGGV 63

Query: 86  EEVRLYPSPVANLVV-PKSSFSLYRTPG 6
           EE RLYPSPV NL++ PK  F+L+ TPG
Sbjct: 64  EETRLYPSPVTNLLLAPK--FTLFNTPG 89


>ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297312234|gb|EFH42658.1|
           regulator of chromosome condensation family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 445

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
 Frame = -1

Query: 197 TTKTPTLYTADTPNDAAATIQLLSWGKGASGQLGGGVEEVRLYPSPVANLVV-PKSSFSL 21
           TTK PTLYT+   +    T+QL SWG+GASGQLGGG+EE+R+YPSPVANL++    SFSL
Sbjct: 29  TTKVPTLYTSPDIDSDPITLQLFSWGRGASGQLGGGIEEIRMYPSPVANLLLRSDQSFSL 88

Query: 20  YRTPGR 3
            +TPGR
Sbjct: 89  AQTPGR 94


>ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana] gi|10176914|dbj|BAB10107.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|332010005|gb|AED97388.1| regulator of chromosome
           condensation repeat-containing protein [Arabidopsis
           thaliana]
          Length = 445

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/89 (51%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
 Frame = -1

Query: 257 HRIASLTHRLXXXXXXXXS---RTTKTPTLYTADTPNDAAATIQLLSWGKGASGQLGGGV 87
           HR+ S T R         S     TK P LYT+   +    T+QL SWG+GASGQLGGG+
Sbjct: 6   HRLRSFTRRFSSTRTTQRSGGGANTKVPILYTSPDIDSDPVTLQLFSWGRGASGQLGGGI 65

Query: 86  EEVRLYPSPVANLVV-PKSSFSLYRTPGR 3
           EE+R+YPSPVANL+     SFSL +TPGR
Sbjct: 66  EEIRMYPSPVANLLFRSDQSFSLAQTPGR 94


>ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis] gi|223551330|gb|EEF52816.1| guanine nucleotide
           exchange factor P532, putative [Ricinus communis]
          Length = 450

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 47/91 (51%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
 Frame = -1

Query: 263 HRHRIASLTHRLXXXXXXXXSRTTKTPTLYTADTPNDA----AATIQLLSWGKGASGQLG 96
           H+   ASLT R+            K P LY     ND     + T+QLLSWG+G+SGQLG
Sbjct: 6   HQRFTASLTRRISTSSP----NKNKLPILYKTPEINDHNRNDSVTLQLLSWGRGSSGQLG 61

Query: 95  GGVEEVRLYPSPVANLVVPKSSFSLYRTPGR 3
           GG+EE RLYPSPVANL    SSFSL  TPG+
Sbjct: 62  GGIEETRLYPSPVANLHALPSSFSLSPTPGQ 92


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