BLASTX nr result
ID: Glycyrrhiza24_contig00025421
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00025421 (281 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein lig... 119 2e-25 gb|ABN06170.1| Regulator of chromosome condensation/beta-lactama... 103 2e-20 ref|XP_002866399.1| regulator of chromosome condensation family ... 88 8e-16 ref|NP_200895.2| regulator of chromosome condensation repeat-con... 85 7e-15 ref|XP_002510629.1| guanine nucleotide exchange factor P532, put... 82 4e-14 >ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine max] Length = 444 Score = 119 bits (299), Expect = 2e-25 Identities = 61/86 (70%), Positives = 67/86 (77%) Frame = -1 Query: 260 RHRIASLTHRLXXXXXXXXSRTTKTPTLYTADTPNDAAATIQLLSWGKGASGQLGGGVEE 81 RHR+A+LTHRL T K P LYTADT DA AT+Q+LSWGKGASGQLGGGVEE Sbjct: 7 RHRLATLTHRLRHSSAAAA--TPKPPILYTADTTADATATLQVLSWGKGASGQLGGGVEE 64 Query: 80 VRLYPSPVANLVVPKSSFSLYRTPGR 3 RLYPSPVANL VPKSSF+L +TPGR Sbjct: 65 TRLYPSPVANLAVPKSSFALSQTPGR 90 >gb|ABN06170.1| Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Medicago truncatula] Length = 444 Score = 103 bits (256), Expect = 2e-20 Identities = 57/88 (64%), Positives = 65/88 (73%), Gaps = 1/88 (1%) Frame = -1 Query: 266 RHRHRIASLTHRLXXXXXXXXSRTTKTPTLYTADTPNDAAATIQLLSWGKGASGQLGGGV 87 RHR RI++LTHRL TTKT TLYT DTP+ T+QLLSWGKGASGQLGGGV Sbjct: 8 RHRRRISTLTHRLYSSFSTTT--TTKTSTLYTTDTPDPT--TVQLLSWGKGASGQLGGGV 63 Query: 86 EEVRLYPSPVANLVV-PKSSFSLYRTPG 6 EE RLYPSPV NL++ PK F+L+ TPG Sbjct: 64 EETRLYPSPVTNLLLAPK--FTLFNTPG 89 >ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis lyrata subsp. lyrata] gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis lyrata subsp. lyrata] Length = 445 Score = 87.8 bits (216), Expect = 8e-16 Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 1/66 (1%) Frame = -1 Query: 197 TTKTPTLYTADTPNDAAATIQLLSWGKGASGQLGGGVEEVRLYPSPVANLVV-PKSSFSL 21 TTK PTLYT+ + T+QL SWG+GASGQLGGG+EE+R+YPSPVANL++ SFSL Sbjct: 29 TTKVPTLYTSPDIDSDPITLQLFSWGRGASGQLGGGIEEIRMYPSPVANLLLRSDQSFSL 88 Query: 20 YRTPGR 3 +TPGR Sbjct: 89 AQTPGR 94 >ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein [Arabidopsis thaliana] gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana] gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein [Arabidopsis thaliana] Length = 445 Score = 84.7 bits (208), Expect = 7e-15 Identities = 46/89 (51%), Positives = 56/89 (62%), Gaps = 4/89 (4%) Frame = -1 Query: 257 HRIASLTHRLXXXXXXXXS---RTTKTPTLYTADTPNDAAATIQLLSWGKGASGQLGGGV 87 HR+ S T R S TK P LYT+ + T+QL SWG+GASGQLGGG+ Sbjct: 6 HRLRSFTRRFSSTRTTQRSGGGANTKVPILYTSPDIDSDPVTLQLFSWGRGASGQLGGGI 65 Query: 86 EEVRLYPSPVANLVV-PKSSFSLYRTPGR 3 EE+R+YPSPVANL+ SFSL +TPGR Sbjct: 66 EEIRMYPSPVANLLFRSDQSFSLAQTPGR 94 >ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus communis] gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus communis] Length = 450 Score = 82.0 bits (201), Expect = 4e-14 Identities = 47/91 (51%), Positives = 55/91 (60%), Gaps = 4/91 (4%) Frame = -1 Query: 263 HRHRIASLTHRLXXXXXXXXSRTTKTPTLYTADTPNDA----AATIQLLSWGKGASGQLG 96 H+ ASLT R+ K P LY ND + T+QLLSWG+G+SGQLG Sbjct: 6 HQRFTASLTRRISTSSP----NKNKLPILYKTPEINDHNRNDSVTLQLLSWGRGSSGQLG 61 Query: 95 GGVEEVRLYPSPVANLVVPKSSFSLYRTPGR 3 GG+EE RLYPSPVANL SSFSL TPG+ Sbjct: 62 GGIEETRLYPSPVANLHALPSSFSLSPTPGQ 92