BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025349
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi...   163   1e-38
ref|XP_002523547.1| pentatricopeptide repeat-containing protein,...   126   2e-27
ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22

>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  163 bits (413), Expect = 1e-38
 Identities = 84/122 (68%), Positives = 95/122 (77%), Gaps = 4/122 (3%)
 Frame = -3

Query: 355 DKVSWNTVIGLCSVQGLYEEALGFFREMVAA---IRPDLVTVVSVLPVCSDSGDEVMARI 185
           DKVSWNTVIGLCS+ G YEEALGFFR MVAA   I+PDLVTVVSVLPVC+++ D+VMARI
Sbjct: 202 DKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARI 261

Query: 184 VHCYXXXXXXXXXXXXG-NALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRG 8
           VHCY              NALVDVYGKCG+EKAS+KVFDE+D R  +SWNAIIT  SFRG
Sbjct: 262 VHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRG 321

Query: 7   LF 2
            +
Sbjct: 322 KY 323



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
 Frame = -3

Query: 349 VSWNTVIGLCSVQGLYEEALGFFREMV-AAIRPDLVTVVSVLPVCSDSGDEVMARIVHCY 173
           +SWN +I   S +G Y +AL  FR M+   +RP+ VT+ S+LPV  + G   +   VH +
Sbjct: 308 ISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGF 367

Query: 172 XXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLS 17
                        N+L+D+Y K G+ + +  +F++M  R  VSWNA+I   +
Sbjct: 368 SLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFA 419



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 43/115 (37%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
 Frame = -3

Query: 343 WNTVIGLCSVQGLYEEALGFFREMV-AAIRPDLVTVVSVLPVCSDSGDEVMARIVHCYXX 167
           WNT+I   S+ G+++   G +  MV A ++PD  T   VL VCSD  +    R VH    
Sbjct: 106 WNTLIRANSIAGVFD-GFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAF 164

Query: 166 XXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGLF 2
                     GN L+  YG CG    + KVFDEM  R +VSWN +I   S  G +
Sbjct: 165 KLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFY 219



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
 Frame = -3

Query: 349 VSWNTVIGLCSVQGLYEEALGFFREMVA-AIRPDLVTVVSVLPVCSDSGDEVMARIVHCY 173
           VSWN +I   +   L  EA+   R+M A    P+ VT  +VLP C+  G   + + +H  
Sbjct: 409 VSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHAR 468

Query: 172 XXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLS 17
                        NAL D+Y KCG    ++ VF+ +  R EVS+N +I G S
Sbjct: 469 IIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYS 519


>ref|XP_002523547.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537254|gb|EEF38886.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 555

 Score =  126 bits (317), Expect = 2e-27
 Identities = 66/116 (56%), Positives = 79/116 (68%), Gaps = 2/116 (1%)
 Frame = -3

Query: 355 DKVSWNTVIGLCSVQGLYEEALGFFREMV--AAIRPDLVTVVSVLPVCSDSGDEVMARIV 182
           D VSWNT++G  SV G Y +AL  F EM   +  RP++VTVVSVLPVC+   DEV+A  +
Sbjct: 75  DVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVLPVCAALEDEVVASEI 134

Query: 181 HCYXXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSF 14
           HCY             NALVDVYGKCGN K+SR+VFDEM  R EVSWNAIIT L++
Sbjct: 135 HCYVVKIGLDSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEVSWNAIITSLAY 190



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
 Frame = -3

Query: 355 DKVSWNTVIGLCSVQGLYEEALGFFREMV-AAIRPDLVTVVSVLPVCSDSGDEVMARIVH 179
           ++VSWN +I   +     ++AL  FR M+   ++P+ VT+ S+LPV  +     + + +H
Sbjct: 177 NEVSWNAIITSLAYMEHNKDALEAFRLMINEEVKPNSVTIASILPVLVELEHFDLGKEIH 236

Query: 178 CYXXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLS 17
            +             N+L+D+Y K G+   +  VF  M  +  VSWNA++   +
Sbjct: 237 GFSLRFGIESDVFISNSLIDMYAKSGHSTQASVVFHLMTEKNVVSWNAMVANFA 290


>ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|222849681|gb|EEE87228.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/116 (53%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
 Frame = -3

Query: 355 DKVSWNTVIGLCSVQGLYEEALGFFREMV--AAIRPDLVTVVSVLPVCSDSGDEVMARIV 182
           D VSWN+VIG+ SV G Y EA+  F EM   +  RP++V++VSVLPVC+   D V  R +
Sbjct: 72  DVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQI 131

Query: 181 HCYXXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSF 14
           HCY            GNALVDVYGKCG  K SR+VFDE+  R  VSWNAIIT L++
Sbjct: 132 HCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAY 187



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
 Frame = -3

Query: 349 VSWNTVIGLCSVQGLYEEALGFFREMV-AAIRPDLVTVVSVLPVCSDSGDEVMARIVHCY 173
           VSWN +I   +     ++AL  FR M+   ++P+ VT  S+LPV  +       + +H +
Sbjct: 176 VSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGF 235

Query: 172 XXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLS 17
                        NAL+D+Y K G    +  VF+++  +  VSWNA++   +
Sbjct: 236 SLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFA 287



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
 Frame = -3

Query: 349 VSWNTVIGLCSVQGLYEEALGFFREMVAAIR-PDLVTVVSVLPVCSDSGDEVMARIVHCY 173
           VSWN ++   +   L   A+   R+M A    P+ VT  +VLP C+  G     + +H  
Sbjct: 277 VSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHAR 336

Query: 172 XXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLS 17
                        NAL D+Y KCG    +R+VF ++  R EVS+N +I G S
Sbjct: 337 AIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYS 387


>ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/118 (47%), Positives = 76/118 (64%), Gaps = 2/118 (1%)
 Frame = -3

Query: 355 DKVSWNTVIGLCSVQGLYEEALGFFREMV--AAIRPDLVTVVSVLPVCSDSGDEVMARIV 182
           D VSWNT+IGL SV G Y EA  ++  M+  + I+P+LV+V+S+LP+ +   DE M R +
Sbjct: 75  DVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRI 134

Query: 181 HCYXXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRG 8
           HCY             NALVD YGKCG+ KA  +VF+E   + EVSWN+II GL+ +G
Sbjct: 135 HCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKG 192



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = -3

Query: 355 DKVSWNTVIGLCSVQGLYEEALGFFREMV-AAIRPDLVTVVSVLPVCSDSGDEVMARIVH 179
           ++VSWN++I   + +G   +AL  FR M+ A  +P+ VT+ S+LPV  +       + +H
Sbjct: 177 NEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIH 236

Query: 178 CYXXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGL 5
            +             N+L+D+Y K G+   +  +F  +D R  VSWNA+I   +   L
Sbjct: 237 GFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRL 294



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
 Frame = -3

Query: 349 VSWNTVIGLCSVQGLYEEALGFFREMVAAIR-PDLVTVVSVLPVCSDSGDEVMARIVHCY 173
           VSWN +I   ++  L  EA+ F  +M      P+ VT  +VLP C+  G     + +H  
Sbjct: 280 VSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAM 339

Query: 172 XXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLS 17
                        N+L+D+Y KCG   ++R VF+    + EVS+N +I G S
Sbjct: 340 GVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYS 390


>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/118 (47%), Positives = 76/118 (64%), Gaps = 2/118 (1%)
 Frame = -3

Query: 355 DKVSWNTVIGLCSVQGLYEEALGFFREMV--AAIRPDLVTVVSVLPVCSDSGDEVMARIV 182
           D VSWNT+IGL SV G Y EA  ++  M+  + I+P+LV+V+S+LP+ +   DE M R +
Sbjct: 224 DVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRI 283

Query: 181 HCYXXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRG 8
           HCY             NALVD YGKCG+ KA  +VF+E   + EVSWN+II GL+ +G
Sbjct: 284 HCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKG 341



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = -3

Query: 355 DKVSWNTVIGLCSVQGLYEEALGFFREMV-AAIRPDLVTVVSVLPVCSDSGDEVMARIVH 179
           ++VSWN++I   + +G   +AL  FR M+ A  +P+ VT+ S+LPV  +       + +H
Sbjct: 326 NEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIH 385

Query: 178 CYXXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRGL 5
            +             N+L+D+Y K G+   +  +F  +D R  VSWNA+I   +   L
Sbjct: 386 GFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRL 443



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
 Frame = -3

Query: 343 WNTVIGLCSV--QGLYEEALGFFREMVAAIRPDLVTVVSVLPVCSDSGDEVMARIVHCYX 170
           WNT+I   S+   G ++    + R +   ++ D  T   VL +CSDS D      VH   
Sbjct: 126 WNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVV 185

Query: 169 XXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLSFRG 8
                      GN L+ +YG CG    +R++FDEM  R  VSWN II  LS  G
Sbjct: 186 FKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNG 239



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
 Frame = -3

Query: 349 VSWNTVIGLCSVQGLYEEALGFFREMVAAIR-PDLVTVVSVLPVCSDSGDEVMARIVHCY 173
           VSWN +I   ++  L  EA+ F  +M      P+ VT  +VLP C+  G     + +H  
Sbjct: 429 VSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAM 488

Query: 172 XXXXXXXXXXXXGNALVDVYGKCGNEKASRKVFDEMDARTEVSWNAIITGLS 17
                        N+L+D+Y KCG   ++R VF+    + EVS+N +I G S
Sbjct: 489 GVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYS 539