BLASTX nr result

ID: Glycyrrhiza24_contig00025327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025327
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_16586211.1| hypothetical protein HMPREF9589_00552 [Propio...    91   1e-16
ref|ZP_16577998.1| hypothetical protein HMPREF9610_00001, partia...    90   2e-16
ref|ZP_06593897.1| conserved hypothetical protein [Streptomyces ...    72   4e-11
ref|ZP_13038074.1| hypothetical protein SMCF_951 [Streptomyces c...    70   2e-10
ref|ZP_13037699.1| hypothetical protein SMCF_600 [Streptomyces c...    69   3e-10

>ref|ZP_16586211.1| hypothetical protein HMPREF9589_00552 [Propionibacterium acnes
           HL059PA1] gi|313816616|gb|EFS54330.1| hypothetical
           protein HMPREF9589_00552 [Propionibacterium acnes
           HL059PA1]
          Length = 349

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 51/93 (54%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
 Frame = -1

Query: 271 PHGTDTLSVTKKYLGLTGGPARFTRHSTSTALLGAT*NHT*HSRLRDSHPLRSAFPDDST 92
           PHGT  LSVTK+YLGLTGGPARFTR+STS+ LLGAT  H  H+    +    S  P  + 
Sbjct: 21  PHGTHPLSVTKEYLGLTGGPARFTRNSTSSTLLGAT-PHQCHAYSYRT-LTHSGTPSQTL 78

Query: 91  SHH---MQADPTAAGSHRPPQPRTCNTCRLEHT 2
             H   +      + + RPPQPRTCNTCRLEHT
Sbjct: 79  HLHATFLTGQSCGSRTTRPPQPRTCNTCRLEHT 111


>ref|ZP_16577998.1| hypothetical protein HMPREF9610_00001, partial [Propionibacterium
           acnes HL027PA2] gi|315085032|gb|EFT57008.1| hypothetical
           protein HMPREF9610_00001 [Propionibacterium acnes
           HL027PA2]
          Length = 281

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 51/93 (54%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
 Frame = -1

Query: 271 PHGTDTLSVTKKYLGLTGGPARFTRHSTSTALLGAT*NHT*HSRLRDSHPLRSAFPDDST 92
           PHGT  LSVTK+YLGLTGGPARFTR+STS  LLGAT  H  H+    +    S  P  + 
Sbjct: 21  PHGTHPLSVTKEYLGLTGGPARFTRNSTSPTLLGAT-PHQCHAYSYRT-LTHSGTPSQTL 78

Query: 91  SHH---MQADPTAAGSHRPPQPRTCNTCRLEHT 2
             H   +      + + RPPQPRTCNTCRLEHT
Sbjct: 79  HLHATFLTGQSCGSRTTRPPQPRTCNTCRLEHT 111


>ref|ZP_06593897.1| conserved hypothetical protein [Streptomyces albus J1074]
           gi|291357456|gb|EFE84358.1| conserved hypothetical
           protein [Streptomyces albus J1074]
          Length = 156

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/89 (47%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
 Frame = -3

Query: 251 IGHQEVFRLNGWSRQIHATFHEYRATWGNLKPHMTLTSTGLSPTT------VRLPRRFNF 90
           IGHQ +FRL+GWSRQIH  F   RATW +LK    +++TG+ P+T      +RL +RF  
Sbjct: 34  IGHQGIFRLSGWSRQIHTGFLGPRATWVSLKRAADVSTTGVLPSTPDLSHVLRLHQRFLT 93

Query: 89  TPHASRSHGSRITQAPTTPHMQHLPA*TH 3
            P A R       + PTTPH Q LP  TH
Sbjct: 94  RPTAGRPW----KRDPTTPHAQPLPGITH 118


>ref|ZP_13038074.1| hypothetical protein SMCF_951 [Streptomyces coelicoflavus ZG0656]
           gi|371552241|gb|EHN79496.1| hypothetical protein
           SMCF_951 [Streptomyces coelicoflavus ZG0656]
          Length = 242

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
 Frame = -3

Query: 251 IGHQEVFRLNGWSRQIHATFHEYRATWGNLKPHMTLTSTGLSPTT------VRLPRRFNF 90
           IGHQ +FRL+GWSRQIH  F   RATW +LK    +++TG+ P+T      +RL +RF  
Sbjct: 34  IGHQGIFRLSGWSRQIHTGFLGPRATWVSLKRAADVSTTGVLPSTPDLSHVLRLHQRFLT 93

Query: 89  TPHASRSHGSRITQAPTTPHMQHLPA*T 6
            P A R       + PTTPH Q LP  T
Sbjct: 94  RPVAGRQQ----KRDPTTPHTQPLPGLT 117


>ref|ZP_13037699.1| hypothetical protein SMCF_600 [Streptomyces coelicoflavus ZG0656]
           gi|371552581|gb|EHN79822.1| hypothetical protein
           SMCF_600 [Streptomyces coelicoflavus ZG0656]
          Length = 242

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
 Frame = -3

Query: 251 IGHQEVFRLNGWSRQIHATFHEYRATWGNLKPHMTLTSTGLSPTT------VRLPRRFNF 90
           IGHQ +FRL+GWSRQIH  F   RATW +LK    +++TG+ P+T      +RL +RF  
Sbjct: 34  IGHQGIFRLSGWSRQIHTGFLGPRATWVSLKRAADVSTTGVLPSTPDLSHVLRLHQRFLT 93

Query: 89  TPHASRSHGSRITQAPTTPHMQHLPA*T 6
            P A R       + PTTPH Q LP  T
Sbjct: 94  RPTAGRPW----KRDPTTPHTQPLPGLT 117


Top