BLASTX nr result

ID: Glycyrrhiza24_contig00025316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025316
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]         511   e-142
ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]         497   e-138
ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula] gi|3555146...   491   e-136
ref|XP_003552006.1| PREDICTED: cyclin-D1-1-like [Glycine max]         474   e-131
ref|XP_003532033.1| PREDICTED: cyclin-D1-1-like [Glycine max]         470   e-130

>ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  511 bits (1315), Expect = e-142
 Identities = 261/340 (76%), Positives = 281/340 (82%), Gaps = 4/340 (1%)
 Frame = +2

Query: 116  MSVSCSNCFLDSD---LLCGEDTSGILSGDSPECFXXXXXXXXXXXXXXXXXIAGLIEDE 286
            MSVSCSNCF D D   LLCGED+SGI+   SPEC                  IAG IEDE
Sbjct: 1    MSVSCSNCFPDDDDSFLLCGEDSSGIIDS-SPEC--SSDLDSPPPSEAEAESIAGFIEDE 57

Query: 287  HRFVPGFDYFSRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYMDRFLNSRQL 466
              FVPGF+Y +RFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNY+DRFLNSRQL
Sbjct: 58   RNFVPGFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYLDRFLNSRQL 117

Query: 467  PQANGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDW 646
            PQ NGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKY+FEP+TIRRMELLVL VLDW
Sbjct: 118  PQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDW 177

Query: 647  RLRSVTPFSFLSFFACKLDSTGTFTGFLISRATQIILSNIQETSFLAYWPSCIAVAAILY 826
            RLRSVTPFSFL FFACKLDS+GTFTGFLISRATQIILSNIQE SFLAYWPSCIA A+IL+
Sbjct: 178  RLRSVTPFSFLDFFACKLDSSGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAASILH 237

Query: 827  AASEIPNWSIIKPEHAESWCEGLRKEKIIGCYRLMQELVIDNDRRKPPTVLPQLRVTTQP 1006
            AA+EIPNWS ++PEHAESWCEGLRKEK+IGCY+LMQELVI+N+RRKPP VLPQLRVT++P
Sbjct: 238  AANEIPNWSFVRPEHAESWCEGLRKEKVIGCYQLMQELVINNNRRKPPKVLPQLRVTSRP 297

Query: 1007 LMR-XXXXXXXXXXXXXXXXXXYKRRKLNNCSWVDDDKGN 1123
            +MR                    KRRKLNN  WVDDDKGN
Sbjct: 298  IMRSSVSSFSASSSFSPSSSLSCKRRKLNNSLWVDDDKGN 337


>ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  497 bits (1279), Expect = e-138
 Identities = 259/344 (75%), Positives = 281/344 (81%), Gaps = 6/344 (1%)
 Frame = +2

Query: 116  MSVSCSNCFLDSD---LLCGEDTSGILSGDSPECFXXXXXXXXXXXXXXXXXIAGLIEDE 286
            MSVSCSNCF D D   LLCGED+SGI+   SPEC                  IAG +EDE
Sbjct: 1    MSVSCSNCFPDDDHSFLLCGEDSSGIMDS-SPEC----SSDLDSSPPSEAESIAGFMEDE 55

Query: 287  HRFVPGFDYFSRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYMDRFLNSRQL 466
              FVPGF+Y +RFQSRSLDASAREESVAWILKVQAYYAFQP+TAYLSVNY+DRFLNSR L
Sbjct: 56   RNFVPGFEYLNRFQSRSLDASAREESVAWILKVQAYYAFQPVTAYLSVNYLDRFLNSRPL 115

Query: 467  P-QANGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLD 643
            P + NGWPLQLLSVACLSLAAKMEE LVPSLLDLQVEGAKY+FEP+TIRRMELLVL VLD
Sbjct: 116  PPKTNGWPLQLLSVACLSLAAKMEESLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLD 175

Query: 644  WRLRSVTPFSFLSFFACKLDSTGTFTGFLISRATQIILSNIQETSFLAYWPSCIAVAAIL 823
            WRLRSVTPFSFL FFACKLDSTGTFTGFLISRATQIILSNIQE SFLAYWPSCIA AAIL
Sbjct: 176  WRLRSVTPFSFLDFFACKLDSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAAAIL 235

Query: 824  YAASEIPNWSIIKPEHAESWCEGLRKEKIIGCYRLMQELVIDNDRRKPPTVLPQLRVT-T 1000
            +AA+EIPNWS+++PEHAESWCEGLRKEKIIGCY+LMQELVIDN++RKPP VLPQLRVT +
Sbjct: 236  HAANEIPNWSLVRPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQLRVTIS 295

Query: 1001 QPLMR-XXXXXXXXXXXXXXXXXXYKRRKLNNCSWVDDDKGNCQ 1129
            +P+MR                    +RRKLNN  WVDDDKGN Q
Sbjct: 296  RPIMRSSVSSFLASSSSPSSSSLSCRRRKLNNSLWVDDDKGNSQ 339


>ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula] gi|355514665|gb|AES96288.1|
            Cyclin-D1-1 [Medicago truncatula]
          Length = 334

 Score =  491 bits (1265), Expect = e-136
 Identities = 252/337 (74%), Positives = 273/337 (81%), Gaps = 1/337 (0%)
 Frame = +2

Query: 116  MSVSCSNCFLDSDLLCGEDTSGILSGDSP-ECFXXXXXXXXXXXXXXXXXIAGLIEDEHR 292
            MS+S SN F DSDLLCGE+TS ILS DSP E F                 IAGLIEDE +
Sbjct: 1    MSISYSNFFTDSDLLCGEETSSILSSDSPTESFSDGESYPPPEDEF----IAGLIEDEGK 56

Query: 293  FVPGFDYFSRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYMDRFLNSRQLPQ 472
            FV GFDYF + +S S D+ AR+ES+ WILKVQ YY FQP+TAYL+VNYMDRFLNSR+LPQ
Sbjct: 57   FVIGFDYFVKMKSSSFDSDARDESIRWILKVQGYYGFQPVTAYLAVNYMDRFLNSRRLPQ 116

Query: 473  ANGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRL 652
             NGWPLQLLSVACLSLAAKMEE LVPSLLDLQVEG KY+FEP TIRRMELLVLSVLDWRL
Sbjct: 117  TNGWPLQLLSVACLSLAAKMEETLVPSLLDLQVEGVKYMFEPITIRRMELLVLSVLDWRL 176

Query: 653  RSVTPFSFLSFFACKLDSTGTFTGFLISRATQIILSNIQETSFLAYWPSCIAVAAILYAA 832
            RSVTPFSFLSFFACKLDST TFTGFLISRATQIILS IQE S LAYWPSCIA AAILYAA
Sbjct: 177  RSVTPFSFLSFFACKLDSTSTFTGFLISRATQIILSKIQEASILAYWPSCIAAAAILYAA 236

Query: 833  SEIPNWSIIKPEHAESWCEGLRKEKIIGCYRLMQELVIDNDRRKPPTVLPQLRVTTQPLM 1012
            +EIPNWS+++PEHAESWCEGLRKEKIIGCY+LMQELVIDN++RKPP VLPQ+RVT QPLM
Sbjct: 237  NEIPNWSLVEPEHAESWCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQMRVTIQPLM 296

Query: 1013 RXXXXXXXXXXXXXXXXXXYKRRKLNNCSWVDDDKGN 1123
            R                  YKRRKLNNC WVDDDKG+
Sbjct: 297  R--SCVSSSSSSPSSSSSSYKRRKLNNCLWVDDDKGS 331


>ref|XP_003552006.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 348

 Score =  474 bits (1220), Expect = e-131
 Identities = 247/347 (71%), Positives = 274/347 (78%), Gaps = 4/347 (1%)
 Frame = +2

Query: 101  PPPVAMSVSCSNCFLDSDLLCGEDTSGILSGDSPECFXXXXXXXXXXXXXXXXX---IAG 271
            PP + MSVSC +   D DLLCGED+SGILSG+SPEC                     IA 
Sbjct: 6    PPGLLMSVSCLS---DYDLLCGEDSSGILSGESPECSFSDIDSSPPPPSPTTEDCYSIAS 62

Query: 272  LIEDEHRFVPGFDYFSRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNYMDRFL 451
             IE E  FVPGF+Y SRFQSRSLDA+AREESV WILKV AYY FQPLTAYL+VNYMDRFL
Sbjct: 63   FIEHERNFVPGFEYLSRFQSRSLDANAREESVGWILKVHAYYGFQPLTAYLAVNYMDRFL 122

Query: 452  NSRQLPQANGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVL 631
            +SR+LP+ NGWPLQL+SVACLSLAAKMEEPLVPSLLDLQ+EGAKYIFEPRTIRRMELLVL
Sbjct: 123  DSRRLPETNGWPLQLVSVACLSLAAKMEEPLVPSLLDLQIEGAKYIFEPRTIRRMELLVL 182

Query: 632  SVLDWRLRSVTPFSFLSFFACKLDSTGTFTGFLISRATQIILSNIQETSFLAYWPSCIAV 811
             VLDWRLRSVTP  FL+FFACK+DSTGTF  FLISRAT+II+SNIQE SFLAYWPSCIA 
Sbjct: 183  GVLDWRLRSVTPLCFLAFFACKVDSTGTFIRFLISRATEIIVSNIQEASFLAYWPSCIAA 242

Query: 812  AAILYAASEIPNWSIIKPEHAESWCEGLRKEKIIGCYRLMQELVIDNDRRKPPT-VLPQL 988
            AAIL AA+EIPNWS++KPE+AESWCEGLRKEK+IGCY+LMQELVI+N++RK PT VLPQL
Sbjct: 243  AAILTAANEIPNWSVVKPENAESWCEGLRKEKVIGCYQLMQELVINNNQRKLPTKVLPQL 302

Query: 989  RVTTQPLMRXXXXXXXXXXXXXXXXXXYKRRKLNNCSWVDDDKGNCQ 1129
            RVTT+  MR                   KRRKLNN  WV DDKGN +
Sbjct: 303  RVTTRTRMRSSTVSSFSSSSSTSFSLSCKRRKLNNRLWV-DDKGNSE 348


>ref|XP_003532033.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 360

 Score =  470 bits (1209), Expect = e-130
 Identities = 247/356 (69%), Positives = 273/356 (76%), Gaps = 13/356 (3%)
 Frame = +2

Query: 101  PPPVAMSVSCSNCFLDSDLLCGEDTSGILSGDSPECFXXXXXXXXXXXXXXXXX------ 262
            PP + MSVSC +   D DLLCGEDTSG+LSG+SPEC                        
Sbjct: 8    PPALLMSVSCLS---DYDLLCGEDTSGVLSGESPECSSSDIGSSPLPPSPPPSPTMTEDC 64

Query: 263  --IAGLIEDEHRFVPGFDYFSRFQSRSLDASAREESVAWILKVQAYYAFQPLTAYLSVNY 436
              IA  IE E  FVPGF+Y SRFQSRSLDA+AREESVAWILKV AYY FQPLTAYL+VNY
Sbjct: 65   YSIASFIEHERNFVPGFEYLSRFQSRSLDANAREESVAWILKVHAYYGFQPLTAYLAVNY 124

Query: 437  MDRFLNSRQLPQANGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRM 616
            MDRFL+S QLP+ NGWPLQLLSVACLSLAAKMEEPLVPSLLDLQ+EGAKYIFEPRTIRRM
Sbjct: 125  MDRFLDSSQLPETNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQIEGAKYIFEPRTIRRM 184

Query: 617  ELLVLSVLDWRLRSVTPFSFLSFFACKLDSTGTFTGFLISRATQIILSNIQETSFLAYWP 796
            ELLVL VLDWRLRSVTP  FL FFACK DSTGTFT FLISRAT+II+SNIQE SFLAY P
Sbjct: 185  ELLVLGVLDWRLRSVTPLCFLVFFACKADSTGTFTRFLISRATEIIVSNIQEASFLAYRP 244

Query: 797  SCIAVAAILYAASEIPNWSIIKPEHAESWCEGLRKEKIIGCYRLMQELVIDNDRRKPPT- 973
            SCIA AAIL AA+EIPNWS++KPE AESWC+G+RKEK+IGCY+LMQELVI+N++RK PT 
Sbjct: 245  SCIAAAAILTAANEIPNWSVVKPEQAESWCQGIRKEKVIGCYQLMQELVINNNQRKLPTK 304

Query: 974  VLPQLRVTTQPLMRXXXXXXXXXXXXXXXXXXY----KRRKLNNCSWVDDDKGNCQ 1129
            VLPQLRVTT+  MR                  +    KRRKLNN  WVDD+KGN +
Sbjct: 305  VLPQLRVTTRTRMRSSTVSSFSSTSSSSSSTSFSLSCKRRKLNNRLWVDDEKGNSE 360


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