BLASTX nr result

ID: Glycyrrhiza24_contig00025299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025299
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago ...   159   2e-37
emb|CBI40732.3| unnamed protein product [Vitis vinifera]              124   1e-26
emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]   122   2e-26
ref|XP_002510694.1| hypothetical protein RCOM_1601600 [Ricinus c...   119   3e-25
ref|XP_002865400.1| pentatricopeptide repeat-containing protein ...   110   1e-22

>ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
           gi|124360397|gb|ABN08410.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355486664|gb|AES67867.1|
           hypothetical protein MTR_2g100200 [Medicago truncatula]
          Length = 527

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/109 (73%), Positives = 92/109 (84%)
 Frame = -2

Query: 327 SNPDERLLLHQISELLPITTCNSHKPTSKDRXXXXXSKSVDGFLSPEEKLRGVFLQKLKG 148
           SN DERL+LHQIS+LLPI       PTSK       SKS+DGFLSPE+KLRG+FLQKLKG
Sbjct: 33  SNLDERLILHQISQLLPI-------PTSKTPDSQSDSKSIDGFLSPEDKLRGIFLQKLKG 85

Query: 147 KAAIEQALSNVCVDVNIDVLGRVLNSGNLGGEAMVTFFNWALKQPVVPK 1
           KAAIEQALSNVC+DVN+D++G+VLN GNLGGEAMV FFNWALKQP+VP+
Sbjct: 86  KAAIEQALSNVCIDVNVDIIGKVLNFGNLGGEAMVMFFNWALKQPMVPR 134


>emb|CBI40732.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  124 bits (310), Expect = 1e-26
 Identities = 66/112 (58%), Positives = 85/112 (75%), Gaps = 3/112 (2%)
 Frame = -2

Query: 327 SNPDERLLLHQISELLPITTCNSH--KP-TSKDRXXXXXSKSVDGFLSPEEKLRGVFLQK 157
           SN +ER +L+Q+S LLPI  CN+   KP T         +++VDGFLSP EKLRGVF+Q+
Sbjct: 13  SNFNERDVLYQLSGLLPIC-CNTSISKPFTENSPKEQLKTRAVDGFLSPGEKLRGVFIQR 71

Query: 156 LKGKAAIEQALSNVCVDVNIDVLGRVLNSGNLGGEAMVTFFNWALKQPVVPK 1
           L+GKAAIE AL+NV +D+ ID++  V+N GNLGGEAMV FFNWA+KQP +PK
Sbjct: 72  LRGKAAIELALTNVGIDLTIDIVSEVINRGNLGGEAMVIFFNWAVKQPTIPK 123


>emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
          Length = 561

 Score =  122 bits (307), Expect = 2e-26
 Identities = 66/112 (58%), Positives = 84/112 (75%), Gaps = 3/112 (2%)
 Frame = -2

Query: 327 SNPDERLLLHQISELLPITTCNSH--KP-TSKDRXXXXXSKSVDGFLSPEEKLRGVFLQK 157
           SN +ER +L+Q+S LLPI  CN+   KP T         +++VDGFLSP EKLRGVF+Q+
Sbjct: 54  SNFNERDVLYQLSGLLPIC-CNTSISKPFTENSPKEQLKTRAVDGFLSPGEKLRGVFIQR 112

Query: 156 LKGKAAIEQALSNVCVDVNIDVLGRVLNSGNLGGEAMVTFFNWALKQPVVPK 1
           L+GKAAIE AL+NV +D+ ID++  V N GNLGGEAMV FFNWA+KQP +PK
Sbjct: 113 LRGKAAIELALTNVGIDLTIDIVSEVXNRGNLGGEAMVXFFNWAVKQPTIPK 164


>ref|XP_002510694.1| hypothetical protein RCOM_1601600 [Ricinus communis]
           gi|223551395|gb|EEF52881.1| hypothetical protein
           RCOM_1601600 [Ricinus communis]
          Length = 243

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/113 (53%), Positives = 79/113 (69%), Gaps = 4/113 (3%)
 Frame = -2

Query: 327 SNPDERLLLHQISELLPIT----TCNSHKPTSKDRXXXXXSKSVDGFLSPEEKLRGVFLQ 160
           SN DER +L ++S+LLPI+       S++     +         D +LSPE+KLRGVFLQ
Sbjct: 57  SNIDERYILRELSDLLPISHKASIARSYELNQSTKQSENRGVVADCYLSPEDKLRGVFLQ 116

Query: 159 KLKGKAAIEQALSNVCVDVNIDVLGRVLNSGNLGGEAMVTFFNWALKQPVVPK 1
           KLKGK+AIE AL  + VD++IDV+  VL+ GNLGGEAM+ FFNWA+KQP +PK
Sbjct: 117 KLKGKSAIENALGKIGVDLSIDVVANVLDRGNLGGEAMIIFFNWAIKQPTIPK 169


>ref|XP_002865400.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311235|gb|EFH41659.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 675

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/106 (53%), Positives = 74/106 (69%)
 Frame = -2

Query: 318 DERLLLHQISELLPITTCNSHKPTSKDRXXXXXSKSVDGFLSPEEKLRGVFLQKLKGKAA 139
           DE  +L ++S LLPI    S     +D        S+D FLSP EKLRGVFLQKLKGK+A
Sbjct: 43  DESYVLAELSSLLPI----SSSLVKEDNYSSRNQVSIDSFLSPAEKLRGVFLQKLKGKSA 98

Query: 138 IEQALSNVCVDVNIDVLGRVLNSGNLGGEAMVTFFNWALKQPVVPK 1
           I+  LS++ +D++ID++  VLN GNL GEAMVTFFNWA+++P V K
Sbjct: 99  IQNCLSSLGIDLSIDIVSDVLNRGNLSGEAMVTFFNWAIREPGVSK 144


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