BLASTX nr result

ID: Glycyrrhiza24_contig00025291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025291
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806...   169   2e-40
ref|XP_003623963.1| Mediator of RNA polymerase II transcription ...   148   5e-34
ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781...   136   2e-30
ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782...   135   3e-30
ref|XP_003627583.1| hypothetical protein MTR_8g030800, partial [...   118   6e-25

>ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max]
          Length = 2279

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/105 (76%), Positives = 95/105 (90%), Gaps = 2/105 (1%)
 Frame = +3

Query: 3   IKFTGKKDLSQVHIAVRLLKLKLRDMQISPRRKNGSTQR--VSYLAKCSSQQNNWNFMKN 176
           +KFTG+KDLS VHIA+RLLK+KLRDMQISP+ K+GST+   VSYLAKCSSQQ N NF+ N
Sbjct: 600 VKFTGRKDLSHVHIAIRLLKMKLRDMQISPKHKSGSTRGCGVSYLAKCSSQQRNQNFVNN 659

Query: 177 ASKIKSGSRSMNQSICSSSIFESPGPLHDIIVCWIDQHVVHKGEG 311
           A KIKS SR+++Q+ICSS++FESPGPLHDIIVCWIDQH+VHKGEG
Sbjct: 660 AFKIKSSSRNLDQNICSSAVFESPGPLHDIIVCWIDQHMVHKGEG 704


>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
           dehydrogenase, lipoyl-binding site [Medicago truncatula]
           gi|355498978|gb|AES80181.1| Mediator of RNA polymerase
           II transcription subunit [Medicago truncatula]
          Length = 2270

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/104 (71%), Positives = 83/104 (79%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   IKFTGKKDLSQVHIAVRLLKLKLRDMQISPRRKNGSTQR-VSYLAKCSSQQNNWNFMKNA 179
           IKFTGKKD+SQVHIAVR+LK+KLR+M     + NGST     YLAKCSSQQNNWN+    
Sbjct: 600 IKFTGKKDISQVHIAVRILKMKLRNMHTLSTQMNGSTHHGAGYLAKCSSQQNNWNY---G 656

Query: 180 SKIKSGSRSMNQSICSSSIFESPGPLHDIIVCWIDQHVVHKGEG 311
            KIKS S++MNQ I SS  FESPGPLHDIIVCWIDQH+VHKGEG
Sbjct: 657 CKIKSSSKTMNQIIRSSIAFESPGPLHDIIVCWIDQHIVHKGEG 700


>ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781696 [Glycine max]
          Length = 2240

 Score =  136 bits (343), Expect = 2e-30
 Identities = 69/103 (66%), Positives = 82/103 (79%)
 Frame = +3

Query: 3   IKFTGKKDLSQVHIAVRLLKLKLRDMQISPRRKNGSTQRVSYLAKCSSQQNNWNFMKNAS 182
           IKFTG+KDLSQVHIAVRLL +K+RD++IS ++ N    R S+LAK SSQ  NWN++ N S
Sbjct: 583 IKFTGRKDLSQVHIAVRLLLMKIRDVKISQKQTN-ENHRASHLAKNSSQCQNWNYVGNVS 641

Query: 183 KIKSGSRSMNQSICSSSIFESPGPLHDIIVCWIDQHVVHKGEG 311
           + KS S+SM      SS+FESPGPLHDIIVCWIDQHVVHKGEG
Sbjct: 642 RSKSSSKSMG-----SSVFESPGPLHDIIVCWIDQHVVHKGEG 679


>ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782672 [Glycine max]
          Length = 2235

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/103 (64%), Positives = 84/103 (81%)
 Frame = +3

Query: 3   IKFTGKKDLSQVHIAVRLLKLKLRDMQISPRRKNGSTQRVSYLAKCSSQQNNWNFMKNAS 182
           IKFTG+KDLSQVHIAVRLLK+K+RD++IS ++ N    R S+LAK SSQ++NWN++ N S
Sbjct: 583 IKFTGRKDLSQVHIAVRLLKMKIRDVKISQKQTN-ENHRASHLAKHSSQRHNWNYVGNVS 641

Query: 183 KIKSGSRSMNQSICSSSIFESPGPLHDIIVCWIDQHVVHKGEG 311
           +++S S+S       SS+FESPGPLHDI+VCWIDQHVV KGEG
Sbjct: 642 RLRSSSKSTG-----SSVFESPGPLHDIVVCWIDQHVVQKGEG 679


>ref|XP_003627583.1| hypothetical protein MTR_8g030800, partial [Medicago truncatula]
           gi|355521605|gb|AET02059.1| hypothetical protein
           MTR_8g030800, partial [Medicago truncatula]
          Length = 1823

 Score =  118 bits (295), Expect = 6e-25
 Identities = 62/103 (60%), Positives = 71/103 (68%)
 Frame = +3

Query: 3   IKFTGKKDLSQVHIAVRLLKLKLRDMQISPRRKNGSTQRVSYLAKCSSQQNNWNFMKNAS 182
           IKFTG+KDLSQVHIAVRLLK+KLRD++ S RR   S  R SY AK  SQ++N N++   S
Sbjct: 736 IKFTGRKDLSQVHIAVRLLKMKLRDVKSSLRRAKRSIHRASYAAKHESQRHNQNYITTGS 795

Query: 183 KIKSGSRSMNQSICSSSIFESPGPLHDIIVCWIDQHVVHKGEG 311
            +               I ESPGPLHDIIVCWIDQHVVHKGEG
Sbjct: 796 SV---------------ISESPGPLHDIIVCWIDQHVVHKGEG 823


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