BLASTX nr result

ID: Glycyrrhiza24_contig00025288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025288
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555463.1| PREDICTED: conserved oligomeric Golgi comple...   151   5e-35
ref|XP_003535496.1| PREDICTED: conserved oligomeric Golgi comple...   151   5e-35
ref|XP_004163062.1| PREDICTED: conserved oligomeric Golgi comple...   135   4e-30
ref|XP_004152888.1| PREDICTED: conserved oligomeric Golgi comple...   135   4e-30
ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28

>ref|XP_003555463.1| PREDICTED: conserved oligomeric Golgi complex subunit 1-like
           [Glycine max]
          Length = 1059

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/95 (78%), Positives = 79/95 (83%)
 Frame = +2

Query: 50  EFHPEKVLDLFLESRKSWISQVLGNAGAGDAXXXXXXXXXXXXGIIQVSVGQVGELFLQV 229
           E  P++VL LFLESRKSWISQ+LGNAG GDA            GIIQV+VGQVGELFLQV
Sbjct: 224 ELEPKQVLSLFLESRKSWISQILGNAGPGDASSLVVSILCDVLGIIQVTVGQVGELFLQV 283

Query: 230 LNDMPLFYKVILGSPPASQLFGGIPNPDEEVRLWK 334
           LNDMPLFYKVILGSPPASQLFGGIPNPDEEVRLWK
Sbjct: 284 LNDMPLFYKVILGSPPASQLFGGIPNPDEEVRLWK 318


>ref|XP_003535496.1| PREDICTED: conserved oligomeric Golgi complex subunit 1-like
           [Glycine max]
          Length = 1059

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/95 (78%), Positives = 79/95 (83%)
 Frame = +2

Query: 50  EFHPEKVLDLFLESRKSWISQVLGNAGAGDAXXXXXXXXXXXXGIIQVSVGQVGELFLQV 229
           E  P++VL LFLESRKSWISQ+LGNAG GDA            GIIQV+VGQVGELFLQV
Sbjct: 224 ELEPKQVLSLFLESRKSWISQILGNAGPGDASSLVVLVLCDVLGIIQVTVGQVGELFLQV 283

Query: 230 LNDMPLFYKVILGSPPASQLFGGIPNPDEEVRLWK 334
           LNDMPLFYKVILGSPPASQLFGGIPNPDEEVRLWK
Sbjct: 284 LNDMPLFYKVILGSPPASQLFGGIPNPDEEVRLWK 318


>ref|XP_004163062.1| PREDICTED: conserved oligomeric Golgi complex subunit 1-like
           [Cucumis sativus]
          Length = 1057

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/95 (70%), Positives = 73/95 (76%)
 Frame = +2

Query: 50  EFHPEKVLDLFLESRKSWISQVLGNAGAGDAXXXXXXXXXXXXGIIQVSVGQVGELFLQV 229
           E  P++VL LFL++RKSWISQ LG  G+  A             IIQVS+GQVGELFLQV
Sbjct: 214 ELEPKQVLSLFLDTRKSWISQKLGTCGSNAAWSVVVSVFCEVLAIIQVSIGQVGELFLQV 273

Query: 230 LNDMPLFYKVILGSPPASQLFGGIPNPDEEVRLWK 334
           LNDMPLFYKVIL SPPASQLFGGIPNPDEEVRLWK
Sbjct: 274 LNDMPLFYKVILSSPPASQLFGGIPNPDEEVRLWK 308


>ref|XP_004152888.1| PREDICTED: conserved oligomeric Golgi complex subunit 1-like
           [Cucumis sativus]
          Length = 1057

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/95 (70%), Positives = 73/95 (76%)
 Frame = +2

Query: 50  EFHPEKVLDLFLESRKSWISQVLGNAGAGDAXXXXXXXXXXXXGIIQVSVGQVGELFLQV 229
           E  P++VL LFL++RKSWISQ LG  G+  A             IIQVS+GQVGELFLQV
Sbjct: 214 ELEPKQVLSLFLDTRKSWISQKLGTCGSNAAWSVVVSVFCEVLAIIQVSIGQVGELFLQV 273

Query: 230 LNDMPLFYKVILGSPPASQLFGGIPNPDEEVRLWK 334
           LNDMPLFYKVIL SPPASQLFGGIPNPDEEVRLWK
Sbjct: 274 LNDMPLFYKVILSSPPASQLFGGIPNPDEEVRLWK 308


>ref|XP_002311274.1| predicted protein [Populus trichocarpa] gi|222851094|gb|EEE88641.1|
           predicted protein [Populus trichocarpa]
          Length = 1071

 Score =  130 bits (326), Expect = 1e-28
 Identities = 70/101 (69%), Positives = 74/101 (73%), Gaps = 6/101 (5%)
 Frame = +2

Query: 50  EFHPEKVLDLFLESRKSWISQVLGNAGAGD------AXXXXXXXXXXXXGIIQVSVGQVG 211
           E  P++VL LFL+SRKSWISQ LG  G  D      +             IIQVSVGQVG
Sbjct: 219 ELEPDQVLGLFLDSRKSWISQKLGGFGWVDVKNDNVSGEVVVFVFCEVLKIIQVSVGQVG 278

Query: 212 ELFLQVLNDMPLFYKVILGSPPASQLFGGIPNPDEEVRLWK 334
           ELFLQVLNDMPLFYKVILGSPPASQLFGGIPNPDEEVRLWK
Sbjct: 279 ELFLQVLNDMPLFYKVILGSPPASQLFGGIPNPDEEVRLWK 319


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