BLASTX nr result

ID: Glycyrrhiza24_contig00025251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025251
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family prote...   177   6e-43
ref|XP_003534325.1| PREDICTED: ATP-dependent DNA helicase Q-like...   142   3e-32
emb|CBI29242.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like...   112   2e-23
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun...   109   2e-22

>ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
           truncatula] gi|355513912|gb|AES95535.1| ATP-dependent
           DNA helicase RecQ family protein expressed [Medicago
           truncatula]
          Length = 685

 Score =  177 bits (450), Expect = 6e-43
 Identities = 96/128 (75%), Positives = 103/128 (80%)
 Frame = -3

Query: 440 TVKLEICVEEKTKAAVRVKRCLGSSGXXXXXXXXXXXLSSAHGGILPHSVLSTQQISLLC 261
           TVKLEI  EEKTKA+ R+KR LGSSG           LSS HGGILPHSVLSTQQISLLC
Sbjct: 558 TVKLEISTEEKTKASARLKRSLGSSGLELKLDELRKELSSNHGGILPHSVLSTQQISLLC 617

Query: 260 SQKPNSLEQLEKVIGKLKTAKYGNQILEQIVKYSDVKPSDEHVTDGRAAKRSKTKKTPVL 81
           SQKPNSLE+LEK IGKLKT KYGN+IL QIVKYSD + +DE V DGRAAKRSKTKK  VL
Sbjct: 618 SQKPNSLEELEKAIGKLKTEKYGNKILAQIVKYSDFELTDEQVNDGRAAKRSKTKKNLVL 677

Query: 80  IESSEDEA 57
           IE+SEDEA
Sbjct: 678 IETSEDEA 685


>ref|XP_003534325.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Glycine max]
          Length = 695

 Score =  142 bits (358), Expect = 3e-32
 Identities = 78/123 (63%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
 Frame = -3

Query: 440 TVKLEICVEEKTKAAVR-VKRCLGSSGXXXXXXXXXXXLSSAHGGILPHSVLSTQQISLL 264
           +VKLEI  E++TK  VR  K+CLGSSG           LSSAHGGILPHSVLST+QI  L
Sbjct: 573 SVKLEIYTEQRTKDGVRSAKQCLGSSGLELKLDELRKELSSAHGGILPHSVLSTEQIIQL 632

Query: 263 CSQKPNSLEQLEKVIGKLKTAKYGNQILEQIVKYSDVKPSDEHVTDGRAAKRSKTKKTPV 84
            SQKPNSLEQLEK+IGKL+T KYGN+IL+QI KY D +P+D+   D RAAKR K+KK  V
Sbjct: 633 ASQKPNSLEQLEKLIGKLRTEKYGNRILKQIEKYYDFEPTDKQEIDARAAKRLKSKKNLV 692

Query: 83  LIE 75
           +IE
Sbjct: 693 IIE 695


>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score =  114 bits (284), Expect = 1e-23
 Identities = 69/134 (51%), Positives = 84/134 (62%), Gaps = 8/134 (5%)
 Frame = -3

Query: 437 VKLEICVEEKTKAA--VRVKRCLGSSGXXXXXXXXXXXLSSAHGGILPHSVLSTQQISLL 264
           VKLEI  + KTK       KR L SSG           LSS HGGI PHSVLSTQQIS+L
Sbjct: 576 VKLEISTKVKTKTGNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQISIL 635

Query: 263 CSQKPNSLEQLEKVIGKLKTAKYGNQILEQIVKYSD------VKPSDEHVTDGRAAKRSK 102
            +QKP S+ + + +IGKLKT KYG++ILE+I KY++      V P D   ++ RA KR K
Sbjct: 636 SAQKPTSILEAKTMIGKLKTEKYGSKILEEIAKYTETEQPENVPPDDRQGSENRAPKRLK 695

Query: 101 TKKTPVLIESSEDE 60
           + K  VLIESS DE
Sbjct: 696 SNKAVVLIESSGDE 709


>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis
           vinifera]
          Length = 711

 Score =  112 bits (281), Expect = 2e-23
 Identities = 69/135 (51%), Positives = 85/135 (62%), Gaps = 9/135 (6%)
 Frame = -3

Query: 437 VKLEICVEEKTKAA--VRVKRCLGSSGXXXXXXXXXXXLSSAHGGILPHSVLSTQQISLL 264
           VKLEI  + KTK       KR L SSG           LSS HGGI PHSVLSTQQIS+L
Sbjct: 576 VKLEISTKVKTKTGNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQISIL 635

Query: 263 CSQKPNSLEQLEKVIGKLKTAKYGNQILEQIVKYSD-------VKPSDEHVTDGRAAKRS 105
            +QKP S+ +LE +IGKLKT KYG++ILE+I KY++       +K  +   ++ RA KR 
Sbjct: 636 SAQKPTSILELETMIGKLKTEKYGSKILEEIAKYTETEQPENRLKTDEGQGSENRAPKRL 695

Query: 104 KTKKTPVLIESSEDE 60
           K+ K  VLIESS DE
Sbjct: 696 KSNKAVVLIESSGDE 710


>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
           gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
           [Ricinus communis]
          Length = 714

 Score =  109 bits (273), Expect = 2e-22
 Identities = 65/132 (49%), Positives = 86/132 (65%), Gaps = 6/132 (4%)
 Frame = -3

Query: 437 VKLEICVEEKTKAAV-RVKRCLGSSGXXXXXXXXXXXLSSAHGGILPHSVLSTQQISLLC 261
           VKLEI  ++     + + KR L  SG           LS+ H GILPHSVLS+QQ+S++ 
Sbjct: 583 VKLEISNKQNKDGKMNKAKRSLMLSGLEFKLDKLRKELSAEHEGILPHSVLSSQQMSMIS 642

Query: 260 SQKPNSLEQLEKVIGKLKTAKYGNQILEQIVKYSDVKPSDEHVTDG-----RAAKRSKTK 96
           +QKPNS E+LEK+IGKLKT +YGN+ILE+I K++    SD  + +      R +KR KTK
Sbjct: 643 AQKPNSTEELEKIIGKLKTERYGNRILEEIKKFAGSNESDNGILNDEGSKRRPSKRLKTK 702

Query: 95  KTPVLIESSEDE 60
           K  VLIESS+DE
Sbjct: 703 KDLVLIESSDDE 714


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