BLASTX nr result
ID: Glycyrrhiza24_contig00025239
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00025239 (332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003620296.1| Fiber expressed protein [Medicago truncatula... 85 5e-15 gb|AFK43845.1| unknown [Medicago truncatula] 84 9e-15 ref|XP_003620292.1| Cotton fiber expressed protein [Medicago tru... 84 9e-15 ref|XP_002329689.1| predicted protein [Populus trichocarpa] gi|2... 74 2e-11 ref|XP_002528226.1| hypothetical protein RCOM_0460020 [Ricinus c... 70 2e-10 >ref|XP_003620296.1| Fiber expressed protein [Medicago truncatula] gi|357500037|ref|XP_003620307.1| Fiber expressed protein [Medicago truncatula] gi|355495311|gb|AES76514.1| Fiber expressed protein [Medicago truncatula] gi|355495322|gb|AES76525.1| Fiber expressed protein [Medicago truncatula] Length = 331 Score = 85.1 bits (209), Expect = 5e-15 Identities = 40/51 (78%), Positives = 45/51 (88%) Frame = +1 Query: 4 VSKLVLMSMGIISILVLLKVAIIPYTFDLVLSTLPRLWISARKWLTLPFLY 156 V+KLVLMS+GIIS L+L KVAIIPYTFDLVLSTLP+LW S R W T+PFLY Sbjct: 21 VAKLVLMSIGIISTLILFKVAIIPYTFDLVLSTLPQLWFSIRTWFTIPFLY 71 >gb|AFK43845.1| unknown [Medicago truncatula] Length = 195 Score = 84.3 bits (207), Expect = 9e-15 Identities = 40/51 (78%), Positives = 45/51 (88%) Frame = +1 Query: 4 VSKLVLMSMGIISILVLLKVAIIPYTFDLVLSTLPRLWISARKWLTLPFLY 156 V+KLVL+S+GIIS L+L KVAIIPYTFDLVLSTLP+LW S R W TLPFLY Sbjct: 21 VAKLVLISIGIISTLILFKVAIIPYTFDLVLSTLPQLWFSIRTWFTLPFLY 71 >ref|XP_003620292.1| Cotton fiber expressed protein [Medicago truncatula] gi|357500045|ref|XP_003620311.1| Cotton fiber expressed protein [Medicago truncatula] gi|355495307|gb|AES76510.1| Cotton fiber expressed protein [Medicago truncatula] gi|355495326|gb|AES76529.1| Cotton fiber expressed protein [Medicago truncatula] Length = 316 Score = 84.3 bits (207), Expect = 9e-15 Identities = 40/51 (78%), Positives = 45/51 (88%) Frame = +1 Query: 4 VSKLVLMSMGIISILVLLKVAIIPYTFDLVLSTLPRLWISARKWLTLPFLY 156 V+KLVL+S+GIIS L+L KVAIIPYTFDLVLSTLP+LW S R W TLPFLY Sbjct: 21 VAKLVLISIGIISTLILFKVAIIPYTFDLVLSTLPQLWFSIRTWFTLPFLY 71 >ref|XP_002329689.1| predicted protein [Populus trichocarpa] gi|222870597|gb|EEF07728.1| predicted protein [Populus trichocarpa] Length = 326 Score = 73.6 bits (179), Expect = 2e-11 Identities = 33/52 (63%), Positives = 42/52 (80%) Frame = +1 Query: 1 WVSKLVLMSMGIISILVLLKVAIIPYTFDLVLSTLPRLWISARKWLTLPFLY 156 W KLVL+S+GIIS +L KVAIIP TF+L+LSTLP +WIS R WL+ P++Y Sbjct: 20 WAVKLVLLSVGIISTFILFKVAIIPCTFNLILSTLPSVWISLRGWLSPPYIY 71 >ref|XP_002528226.1| hypothetical protein RCOM_0460020 [Ricinus communis] gi|223532362|gb|EEF34159.1| hypothetical protein RCOM_0460020 [Ricinus communis] Length = 328 Score = 70.1 bits (170), Expect = 2e-10 Identities = 28/52 (53%), Positives = 41/52 (78%) Frame = +1 Query: 1 WVSKLVLMSMGIISILVLLKVAIIPYTFDLVLSTLPRLWISARKWLTLPFLY 156 W +KLVL+S GI++ ++ KVA++P+ FDL+LSTLP LWIS WL+ P++Y Sbjct: 20 WGAKLVLLSAGIMAAIIFFKVAMVPFAFDLILSTLPSLWISLHSWLSPPYIY 71