BLASTX nr result

ID: Glycyrrhiza24_contig00025237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025237
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629102.1| Exosome complex exonuclease [Medicago trunca...   234   6e-60
ref|XP_002276909.1| PREDICTED: exosome complex exonuclease RRP44...   231   5e-59
ref|XP_002276939.1| PREDICTED: exosome complex exonuclease RRP44...   231   5e-59
ref|XP_003526807.1| PREDICTED: exosome complex exonuclease RRP44...   226   1e-57
ref|XP_003523275.1| PREDICTED: exosome complex exonuclease RRP44...   225   3e-57

>ref|XP_003629102.1| Exosome complex exonuclease [Medicago truncatula]
           gi|355523124|gb|AET03578.1| Exosome complex exonuclease
           [Medicago truncatula]
          Length = 1045

 Score =  234 bits (597), Expect = 6e-60
 Identities = 121/155 (78%), Positives = 127/155 (81%)
 Frame = -1

Query: 467 AVKVLLITNDKENKRKASEEGICAETVESYVKXXXXXXXXXXXXXXXSXXXXXXXXXDLR 288
           A+KVLL+TNDKENKRKASEEGICAETVESYVK               S         D R
Sbjct: 151 AIKVLLVTNDKENKRKASEEGICAETVESYVKSLDRPDLLDLLVRPSSEDVEMEDVEDHR 210

Query: 287 PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNQFEAYVGSESIGDEIIIYGRSNM 108
           PSKRK+IY+EHKPMSEITSGLHRGIYHQGKLRVNRYN FEAYVGSESIGDEIIIYGRSNM
Sbjct: 211 PSKRKIIYAEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRSNM 270

Query: 107 NRAFDGDIVAVELLPQDQWQEEKSLSIAGEEDEDE 3
           NRAFDGDIVAVELLPQDQWQ EKS+SIA EEDED+
Sbjct: 271 NRAFDGDIVAVELLPQDQWQGEKSMSIASEEDEDD 305


>ref|XP_002276909.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Vitis
           vinifera]
          Length = 899

 Score =  231 bits (589), Expect = 5e-59
 Identities = 120/155 (77%), Positives = 125/155 (80%)
 Frame = -1

Query: 467 AVKVLLITNDKENKRKASEEGICAETVESYVKXXXXXXXXXXXXXXXSXXXXXXXXXDLR 288
           A +VLLITND+ENKRKA+EEGI AETVESYVK                         DLR
Sbjct: 151 AARVLLITNDRENKRKATEEGISAETVESYVKALGQPGLLDLLVQPAPEDVGMEEVEDLR 210

Query: 287 PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNQFEAYVGSESIGDEIIIYGRSNM 108
           PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYN FEAYVGSESIGDEIIIYGR NM
Sbjct: 211 PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRGNM 270

Query: 107 NRAFDGDIVAVELLPQDQWQEEKSLSIAGEEDEDE 3
           NRAFDGD+VAVELLPQDQWQEEKSLSIA EEDE+E
Sbjct: 271 NRAFDGDVVAVELLPQDQWQEEKSLSIADEEDEEE 305


>ref|XP_002276939.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Vitis
           vinifera] gi|296082564|emb|CBI21569.3| unnamed protein
           product [Vitis vinifera]
          Length = 937

 Score =  231 bits (589), Expect = 5e-59
 Identities = 120/155 (77%), Positives = 125/155 (80%)
 Frame = -1

Query: 467 AVKVLLITNDKENKRKASEEGICAETVESYVKXXXXXXXXXXXXXXXSXXXXXXXXXDLR 288
           A +VLLITND+ENKRKA+EEGI AETVESYVK                         DLR
Sbjct: 151 AARVLLITNDRENKRKATEEGISAETVESYVKALGQPGLLDLLVQPAPEDVGMEEVEDLR 210

Query: 287 PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNQFEAYVGSESIGDEIIIYGRSNM 108
           PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYN FEAYVGSESIGDEIIIYGR NM
Sbjct: 211 PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRGNM 270

Query: 107 NRAFDGDIVAVELLPQDQWQEEKSLSIAGEEDEDE 3
           NRAFDGD+VAVELLPQDQWQEEKSLSIA EEDE+E
Sbjct: 271 NRAFDGDVVAVELLPQDQWQEEKSLSIADEEDEEE 305


>ref|XP_003526807.1| PREDICTED: exosome complex exonuclease RRP44-like [Glycine max]
          Length = 934

 Score =  226 bits (577), Expect = 1e-57
 Identities = 122/155 (78%), Positives = 123/155 (79%)
 Frame = -1

Query: 467 AVKVLLITNDKENKRKASEEGICAETVESYVKXXXXXXXXXXXXXXXSXXXXXXXXXDLR 288
           AVKVLLITNDKENKRKASEEGI AETVESYVK               S         DLR
Sbjct: 151 AVKVLLITNDKENKRKASEEGILAETVESYVKSLVRPDLLDLLVRPASEDVDMEEVEDLR 210

Query: 287 PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNQFEAYVGSESIGDEIIIYGRSNM 108
           PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYN FEAYVGSESIGDEI+IYGRS M
Sbjct: 211 PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIVIYGRSIM 270

Query: 107 NRAFDGDIVAVELLPQDQWQEEKSLSIAGEEDEDE 3
           NRAFDGDIVA ELLPQDQWQ   SLSIA EEDEDE
Sbjct: 271 NRAFDGDIVAAELLPQDQWQGVSSLSIAHEEDEDE 305


>ref|XP_003523275.1| PREDICTED: exosome complex exonuclease RRP44-like [Glycine max]
          Length = 934

 Score =  225 bits (573), Expect = 3e-57
 Identities = 123/156 (78%), Positives = 124/156 (79%), Gaps = 1/156 (0%)
 Frame = -1

Query: 467 AVKVLLITNDKENKRKASEEGICAETVESYVKXXXXXXXXXXXXXXXSXXXXXXXXXDLR 288
           AVKVLL+TNDKENKRKASEEGI AETVESYVK               S         DLR
Sbjct: 151 AVKVLLLTNDKENKRKASEEGILAETVESYVKSLDQPDLLDLLVRPASEDVDMEEVEDLR 210

Query: 287 PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNQFEAYVGSESIGDEIIIYGRSNM 108
           PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYN FEAYVGSESIGDEIIIYGRSNM
Sbjct: 211 PSKRKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRSNM 270

Query: 107 NRAFDGDIVAVELLPQDQWQEEKSLSIAGE-EDEDE 3
           NRAFDGDIVA ELLPQDQWQ   SLSIA E EDEDE
Sbjct: 271 NRAFDGDIVAAELLPQDQWQGVSSLSIAHEDEDEDE 306


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