BLASTX nr result

ID: Glycyrrhiza24_contig00025207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025207
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatu...   219   1e-54
emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]   143   6e-32
ref|ZP_01682799.1| fatty oxidation complex alpha subunit [Vibrio...   143   8e-32
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...   133   6e-29
gb|AAV32822.1| transposase [Zea mays]                                 128   2e-27

>ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatula]
            gi|355481013|gb|AES62216.1| Elongation factor 1-alpha
            [Medicago truncatula]
          Length = 1001

 Score =  219 bits (557), Expect = 1e-54
 Identities = 113/259 (43%), Positives = 168/259 (64%)
 Frame = +3

Query: 3    SGTSYVTSNVYMLEVFGIGRRIRKMCHSKDVSIRRMAERLRKKYDEYWGNPDTLNMLLLI 182
            SG+SY+TSN+YM E+ GIG+RI +MC S+DV +R MA+R++ KYD+YWGN  +LNM+LL+
Sbjct: 422  SGSSYLTSNIYMFEILGIGKRIVEMCSSEDVHLRSMAQRMKLKYDKYWGNYKSLNMMLLV 481

Query: 183  AVIFNPRCKVGYMNWIINQIFDLGEAANXXXXXXXXXXXXXXXYIDGGEEPQNDSQEARF 362
            A++F+PR KV   +W+I + ++  ++                 Y D    P+ +S EA  
Sbjct: 482  ALVFDPRRKVRLADWMIRRFYNEDDSDALIAMLESCLKSLYEEYYDRVMHPRGNS-EAPQ 540

Query: 363  DEDGKEDPYSWNQFLQSTRHKSSVRFELNKYLEEDIETSPDLDILNWWKLNSNRFPILAN 542
              +G  D Y  ++F  S    +S   ELN YL E +E + ++++L WWK+NS R+PILA 
Sbjct: 541  AFNGDSDLYGTSEFYLSDGCGTSDN-ELNTYLNESLERNMEINVLEWWKVNSGRYPILAK 599

Query: 543  IGREVLAIPVSTIASEFAFSTGAKMLDSYCSFLTPELLEALVCTQDLLNGTPSSLVSYKD 722
            I R+VLAIP++T+ASE  FST  ++LD Y S LTP  +EAL+CTQD L G  SSL++ +D
Sbjct: 600  IARDVLAIPITTVASESTFSTSERVLDPYRSSLTPTTIEALICTQDWLKGASSSLITTED 659

Query: 723  MEKLKLSDKDMERLKQANI 779
             E L+L ++     ++A I
Sbjct: 660  FENLELLEQGQMGKEKAQI 678


>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score =  143 bits (361), Expect = 6e-32
 Identities = 83/260 (31%), Positives = 140/260 (53%), Gaps = 9/260 (3%)
 Frame = +3

Query: 3    SGTSYVTSNVYMLEVFGIGRRIRKMCHSKDVSIRRMAERLRKKYDEYWGNPDTLNMLLLI 182
            SG+ + TSN Y  ++  I   IRK   S D+ +  MA+ ++ KYD+YWGN    N+LL +
Sbjct: 294  SGSLFTTSNAYFHKLCLIRNLIRKYLKSNDLLLSDMAQNMKAKYDKYWGNLKRSNLLLYV 353

Query: 183  AVIFNPRCKVGYMNWIINQIFDLGEAANXXXXXXXXXXXXXXXY--------IDGGEEPQ 338
             V+ +PR K+ ++ +  +Q++D   A +               Y        +   EE  
Sbjct: 354  VVVLDPRYKLKFVQFCFDQLYDKEVAKDMSTRVVDVLRKLYDEYRLLYFHNEVCDLEEFS 413

Query: 339  NDSQEARFDEDGKEDPYSWNQFLQSTRHKSSVRFELNKYLEEDIETSPD-LDILNWWKLN 515
               +    ++D     Y++ + L    H    + EL+ YL E  E   D  DIL+WWK+N
Sbjct: 414  QPKESELGEQDDLNFVYTFTRHLYE-EHNVESKSELDWYLSESNERVDDGFDILHWWKVN 472

Query: 516  SNRFPILANIGREVLAIPVSTIASEFAFSTGAKMLDSYCSFLTPELLEALVCTQDLLNGT 695
             ++F +LA I ++VLAIP+ST+A E  FSTG ++LD + S L+P+ +E L+C Q+ L  +
Sbjct: 473  CSKFKVLAQIAKDVLAIPISTVAFESKFSTGGRILDPFRSSLSPKTVEMLICGQNRLRSS 532

Query: 696  PSSLVSYKDMEKLKLSDKDM 755
            P  +   + ME+++  ++D+
Sbjct: 533  PIPINLRETMEEIENLEQDI 552


>ref|ZP_01682799.1| fatty oxidation complex alpha subunit [Vibrio cholerae V52]
           gi|121627762|gb|EAX60388.1| fatty oxidation complex
           alpha subunit [Vibrio cholerae V52]
          Length = 275

 Score =  143 bits (360), Expect = 8e-32
 Identities = 81/241 (33%), Positives = 135/241 (56%), Gaps = 13/241 (5%)
 Frame = +3

Query: 3   SGTSYVTSNVYMLEVFGIGRRIRKMCHSKDVSIRRMAERLRKKYDEYWGNPDTLNMLLLI 182
           SG+ YVT NV+  ++  +   ++    S +V + +MA  +++K+ +YWG P+ +N +L I
Sbjct: 19  SGSRYVTCNVHFEDICELDAYLKACMASDEVDLSKMASGMKEKFKKYWGTPEKMNKMLFI 78

Query: 183 AVIFNPRCKVGYMNWIINQIF--DLGEAANXXXXXXXXXXXXXXX--YIDGGEEPQN--- 341
           A + +PR K  Y+N+ + ++   + G+  N                 Y  G +   +   
Sbjct: 79  ASVLDPRNKFVYVNFALEELLGEEKGKIVNNEVEAYLKKLFAIYVSKYAKGSKNQPSSSD 138

Query: 342 --DSQEARFDEDGKEDPYSWNQFLQSTRHKSS---VRFELNKYLEEDIET-SPDLDILNW 503
             DS      ++ K +      +++  +  S    V+ EL++YL ED E  S D DIL W
Sbjct: 139 LSDSSTCGLSQNVKTNSLRTKFYMKKQKEDSGSLGVKSELDRYLLEDQEPESEDFDILIW 198

Query: 504 WKLNSNRFPILANIGREVLAIPVSTIASEFAFSTGAKMLDSYCSFLTPELLEALVCTQDL 683
           WK+NS RFP+L+ + R+VLAIP+S++ASE AFSTG ++LD + S LTP+ ++ L+C QD 
Sbjct: 199 WKVNSPRFPVLSQLARDVLAIPMSSVASECAFSTGGRILDPFRSSLTPKCVQCLICVQDW 258

Query: 684 L 686
           L
Sbjct: 259 L 259


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score =  133 bits (335), Expect = 6e-29
 Identities = 82/217 (37%), Positives = 117/217 (53%), Gaps = 3/217 (1%)
 Frame = +3

Query: 3    SGTSYVTSNVYMLEVFGI--GRRIRKMCHSKDVSIRRMAERLRKKYDEYWGNPDTLNMLL 176
            SG++YVTS+ Y +E   I  G      CH  D  +  MA ++  KY +YWG+   +NML+
Sbjct: 1339 SGSTYVTSSTYFMEHCKILGGFNAWMGCHKDDPILANMATKMTAKYSKYWGDVAKMNMLV 1398

Query: 177  LIAVIFNPRCKVGYMNWIINQIFDLGEAANXXXXXXXXXXXXXXXYIDGGEEPQNDSQEA 356
             IAVIF PR K  ++NW +N+ ++   A +               Y     +   D Q  
Sbjct: 1399 FIAVIFYPRRKFQFINWGLNKYYEKEVADSLCDKVKEALNKMFESYSRFSNKEDVDDQ-- 1456

Query: 357  RFDEDGKEDPYSWNQFLQSTRHKSSVRFELNKYLEEDIET-SPDLDILNWWKLNSNRFPI 533
             F++D  +DP      L  T        E++ YL E  E  +PD DILNWWK+NS ++P 
Sbjct: 1457 -FEKDMDQDPN-----LSQT--------EVDIYLSEPREKKNPDFDILNWWKVNSTKYPT 1502

Query: 534  LANIGREVLAIPVSTIASEFAFSTGAKMLDSYCSFLT 644
            L  I R++LA+P+ST+ASE AFSTG ++L  Y S LT
Sbjct: 1503 LGLIARDILAMPISTVASESAFSTGGRVLSCYRSSLT 1539


>gb|AAV32822.1| transposase [Zea mays]
          Length = 674

 Score =  128 bits (322), Expect = 2e-27
 Identities = 86/282 (30%), Positives = 138/282 (48%), Gaps = 25/282 (8%)
 Frame = +3

Query: 3    SGTSYVTSNVYMLEVFGIGRRIRKMCHSKDVSIRRMAERLRKKYDEYWG----------- 149
            S T+++TS+    E+  +   ++   +S+DV    M +R+++K+D+YWG           
Sbjct: 377  SATNHITSHTLFHEIGEVHLLVQSWLNSEDVFQASMVKRMKEKFDKYWGLWHTSKNIDGN 436

Query: 150  ------------NPDTLNMLLLIAVIFNPRCKVG-YMNWIINQIFDLGEAANXXXXXXXX 290
                          + +N+L+ +A   +PR K+  Y    + +IF      N        
Sbjct: 437  ANDKEKGRGKGKEKENMNLLIFVAGCLDPRYKLSMYTKITVEEIFGEERGQNTGNYILQV 496

Query: 291  XXXXXXXYIDGGEEPQNDSQEARFDEDGKEDPYSWNQFLQSTRHKSSVRFELNKYLEEDI 470
                        +   +DS  ++    GK       +    T   S+ + EL+KYL E+ 
Sbjct: 497  KR----------QPDVSDSIASKGGRGGKLKEVIAKRMKLGTGSNSNNKSELDKYLAEET 546

Query: 471  E-TSPDLDILNWWKLNSNRFPILANIGREVLAIPVSTIASEFAFSTGAKMLDSYCSFLTP 647
            E T   LD+L WWK +  RFPIL+ + R+VLAIP+S++ASE AFSTG ++LD + S LTP
Sbjct: 547  EDTEMKLDLLVWWKASEQRFPILSRLARDVLAIPISSVASESAFSTGGRILDDFRSSLTP 606

Query: 648  ELLEALVCTQDLLNGTPSSLVSYKDMEKLKLSDKDMERLKQA 773
             +LE+LVCTQD L  T    ++    E  KL ++  E   +A
Sbjct: 607  FMLESLVCTQDWLRWTIPIDITENIEELTKLEEELFEEFGKA 648


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