BLASTX nr result

ID: Glycyrrhiza24_contig00025162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025162
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238608.1| ubiquitin specific protease 12 [Glycine max]...   182   3e-44
ref|XP_003589912.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   180   1e-43
ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putat...   179   2e-43
ref|XP_003535946.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   178   5e-43
gb|ACU01869.1| ubiquitin specific protease 12 variant 2 [Glycine...   178   5e-43

>ref|NP_001238608.1| ubiquitin specific protease 12 [Glycine max]
            gi|255317079|gb|ACU01857.1| ubiquitin specific protease
            12 [Glycine max] gi|255317096|gb|ACU01870.1| ubiquitin
            specific protease 12 [Glycine max]
          Length = 1116

 Score =  182 bits (461), Expect = 3e-44
 Identities = 87/108 (80%), Positives = 99/108 (91%)
 Frame = +2

Query: 2    FQKSYLDVGSGEQYRYPDVPSFLEYVHNRRVVRFRFLEKPKEDEFSLELSKLHTYDNVVE 181
            FQKS +  GSGE+YRYPDVPSFLEYVHNR VVRFR LEKPKEDEFSLEL+KL TYDNVVE
Sbjct: 775  FQKS-VQTGSGERYRYPDVPSFLEYVHNRLVVRFRTLEKPKEDEFSLELTKLDTYDNVVE 833

Query: 182  KVSQHLGLNDNSKVRLTSHNCYSQQPKPQAIKYQGVERLSDMLVHYNQ 325
            +V+QH+GL+D SK+RLTSHNCYSQQPKPQ+IKY+G+E LSDML+H NQ
Sbjct: 834  EVAQHIGLSDPSKIRLTSHNCYSQQPKPQSIKYRGMEHLSDMLIHSNQ 881


>ref|XP_003589912.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355478960|gb|AES60163.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 1119

 Score =  180 bits (456), Expect = 1e-43
 Identities = 87/108 (80%), Positives = 95/108 (87%)
 Frame = +2

Query: 2    FQKSYLDVGSGEQYRYPDVPSFLEYVHNRRVVRFRFLEKPKEDEFSLELSKLHTYDNVVE 181
            FQKS       +QY YPDVPSF EYV NR+VVRFRFLEKPKEDEFSLELSKLHTYD+VVE
Sbjct: 777  FQKSPPAGDGQQQYCYPDVPSFFEYVQNRQVVRFRFLEKPKEDEFSLELSKLHTYDDVVE 836

Query: 182  KVSQHLGLNDNSKVRLTSHNCYSQQPKPQAIKYQGVERLSDMLVHYNQ 325
            +VSQHLGLND SK+RLTSHNCYSQQPKPQ IKY+GV+ LS+MLVHYNQ
Sbjct: 837  RVSQHLGLNDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSEMLVHYNQ 884


>ref|XP_002514434.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223546430|gb|EEF47930.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 1109

 Score =  179 bits (454), Expect = 2e-43
 Identities = 87/108 (80%), Positives = 95/108 (87%)
 Frame = +2

Query: 2    FQKSYLDVGSGEQYRYPDVPSFLEYVHNRRVVRFRFLEKPKEDEFSLELSKLHTYDNVVE 181
            FQKS  D G GEQ RYPDVPSFLEYVHNR+VVRFR LEKPKEDEF LELSKLH YD+VVE
Sbjct: 773  FQKSAQD-GGGEQCRYPDVPSFLEYVHNRQVVRFRSLEKPKEDEFCLELSKLHNYDDVVE 831

Query: 182  KVSQHLGLNDNSKVRLTSHNCYSQQPKPQAIKYQGVERLSDMLVHYNQ 325
            +V+ HLGL+D SK+RLTSHNCYSQQPKPQ IKY+GV+ LSDML HYNQ
Sbjct: 832  RVATHLGLDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLAHYNQ 879


>ref|XP_003535946.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13 [Glycine max]
          Length = 1121

 Score =  178 bits (451), Expect = 5e-43
 Identities = 84/108 (77%), Positives = 97/108 (89%)
 Frame = +2

Query: 2    FQKSYLDVGSGEQYRYPDVPSFLEYVHNRRVVRFRFLEKPKEDEFSLELSKLHTYDNVVE 181
            FQKS    GSGE+YRYPDVPSFLEYVHNR VVRFR LEKPKEDEFSLELSKL +YDNVVE
Sbjct: 780  FQKSSPQTGSGERYRYPDVPSFLEYVHNRLVVRFRTLEKPKEDEFSLELSKLDSYDNVVE 839

Query: 182  KVSQHLGLNDNSKVRLTSHNCYSQQPKPQAIKYQGVERLSDMLVHYNQ 325
            +V+QH+GL+D SK+RLTSHNCYSQQPK Q+IK++G+E L+DML+H NQ
Sbjct: 840  EVAQHIGLHDPSKIRLTSHNCYSQQPKAQSIKFRGMEHLTDMLIHSNQ 887


>gb|ACU01869.1| ubiquitin specific protease 12 variant 2 [Glycine max]
          Length = 792

 Score =  178 bits (451), Expect = 5e-43
 Identities = 84/108 (77%), Positives = 97/108 (89%)
 Frame = +2

Query: 2   FQKSYLDVGSGEQYRYPDVPSFLEYVHNRRVVRFRFLEKPKEDEFSLELSKLHTYDNVVE 181
           FQKS    GSGE+YRYPDVPSFLEYVHNR VVRFR LEKPKEDEFSLELSKL +YDNVVE
Sbjct: 583 FQKSSPQTGSGERYRYPDVPSFLEYVHNRLVVRFRTLEKPKEDEFSLELSKLDSYDNVVE 642

Query: 182 KVSQHLGLNDNSKVRLTSHNCYSQQPKPQAIKYQGVERLSDMLVHYNQ 325
           +V+QH+GL+D SK+RLTSHNCYSQQPK Q+IK++G+E L+DML+H NQ
Sbjct: 643 EVAQHIGLHDPSKIRLTSHNCYSQQPKAQSIKFRGMEHLTDMLIHSNQ 690


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