BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025134
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containi...   297   6e-79
ref|XP_003601393.1| Pentatricopeptide repeat-containing protein ...   296   1e-78
emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]   252   3e-65
ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containi...   250   8e-65
emb|CBI22251.3| unnamed protein product [Vitis vinifera]              250   8e-65

>ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 488

 Score =  297 bits (761), Expect = 6e-79
 Identities = 141/176 (80%), Positives = 158/176 (89%)
 Frame = +3

Query: 3   GLLVAHVKAGELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWP 182
           GLLVAHVKAGEL++ARRVFDEMP+RDVVSWT ML+GYSQAK P EAL LF EMR +GVWP
Sbjct: 182 GLLVAHVKAGELEVARRVFDEMPQRDVVSWTAMLTGYSQAKRPREALELFGEMRRSGVWP 241

Query: 183 DEVTMVSMISACADMGDVEMGRMVHRFVEENGFGWMVALCNALVDMYGKCGCLEQAWCVF 362
           DEVTMVS++SACA +GD+E G MVHRFVEENGFGWMVALCNAL+DMYGKCGCLE+AW VF
Sbjct: 242 DEVTMVSLVSACASLGDMETGMMVHRFVEENGFGWMVALCNALIDMYGKCGCLEEAWRVF 301

Query: 363 NGMKRKSLITWNTMMMVCANHGYADDAFRLFEWMISSGGAVPDCWTILALLVAYAH 530
           +GM RKSLITWNTM+ VCAN+G AD+AFRLFEWM+ S G VPD  T+LALLVAYAH
Sbjct: 302 HGMTRKSLITWNTMVTVCANYGNADEAFRLFEWMVCS-GVVPDSVTLLALLVAYAH 356



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
 Frame = +3

Query: 6   LLVAHVKAGELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWPD 185
           L+  + K G L+ A RVF  M  + +++W  M++  +      EA  LF  M  +GV PD
Sbjct: 284 LIDMYGKCGCLEEAWRVFHGMTRKSLITWNTMVTVCANYGNADEAFRLFEWMVCSGVVPD 343

Query: 186 EVTMVSMISACADMGDVEMG-RMVHRFVEENGFGWMVALCNALVDMYGKCGCLEQAWCVF 362
            VT+++++ A A  G V+ G R+      + G    +    A++DM G+ G L++A+ + 
Sbjct: 344 SVTLLALLVAYAHKGLVDEGIRLFESMDRDYGVEPRIEHYGAVIDMLGRAGRLQEAYDLL 403

Query: 363 NGMKRK-SLITWNTMMMVCANHGYADDAFRLFEWMI 467
             +    +   W  ++  C  HG  +   +L + ++
Sbjct: 404 TNIPIPCNDAVWGALLGACRIHGDVEMGEKLIKKLL 439


>ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|358344321|ref|XP_003636238.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355490441|gb|AES71644.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355502173|gb|AES83376.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 486

 Score =  296 bits (758), Expect = 1e-78
 Identities = 142/176 (80%), Positives = 158/176 (89%)
 Frame = +3

Query: 3   GLLVAHVKAGELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWP 182
           GLLVAH KAGELD+AR+VFD MPERDVVSWT+MLS YS+AK P E L LF+EMRLAGVWP
Sbjct: 180 GLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWP 239

Query: 183 DEVTMVSMISACADMGDVEMGRMVHRFVEENGFGWMVALCNALVDMYGKCGCLEQAWCVF 362
           DEVT++S+ISACA++GD EMGRMVH+FVEENGFGWMVALCN+L+DMYGKCGCLE+AW VF
Sbjct: 240 DEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVF 299

Query: 363 NGMKRKSLITWNTMMMVCANHGYADDAFRLFEWMISSGGAVPDCWTILALLVAYAH 530
           +  KRKSLITWN MMMVCANHGYA+DAFRLFE MI S G VPD  TILALLVAYAH
Sbjct: 300 DRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGS-GVVPDGVTILALLVAYAH 354



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
 Frame = +3

Query: 6   LLVAHVKAGELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWPD 185
           L+  + K G L+ A +VFD    + +++W  M+   +      +A  LF  M  +GV PD
Sbjct: 282 LIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPD 341

Query: 186 EVTMVSMISACADMGDVEMG-RMVHRFVEENGFGWMVALCNALVDMYGKCGCLEQAWCVF 362
            VT+++++ A A  G V+ G R+      + G    +    A+VDM G+ G L++A+ + 
Sbjct: 342 GVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLL 401

Query: 363 NGMKRKSL-ITWNTMMMVCANHG 428
             M   S  + W  ++  C  HG
Sbjct: 402 TSMPIPSNDVIWGALLGACRIHG 424


>emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
          Length = 722

 Score =  252 bits (643), Expect = 3e-65
 Identities = 121/176 (68%), Positives = 144/176 (81%)
 Frame = +3

Query: 3   GLLVAHVKAGELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWP 182
           GL+VAHV+AGEL++AR+VFDEMPERDVVSWTVM+SGY+QAK   EAL LFREMR  GV P
Sbjct: 416 GLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRP 475

Query: 183 DEVTMVSMISACADMGDVEMGRMVHRFVEENGFGWMVALCNALVDMYGKCGCLEQAWCVF 362
           DEV MV +ISAC  +GD+E G  VHR+++ENGFGWMV+LCNAL+DMY KCGC++ AW VF
Sbjct: 476 DEVAMVIVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVF 535

Query: 363 NGMKRKSLITWNTMMMVCANHGYADDAFRLFEWMISSGGAVPDCWTILALLVAYAH 530
           N M+RKSLITWN+M+  CANHG A+DAFR+F  M+ S G  PD  T LALL AY H
Sbjct: 536 NNMERKSLITWNSMISACANHGNAEDAFRVFTLMLXS-GIRPDGVTFLALLTAYTH 590



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
 Frame = +3

Query: 6   LLVAHVKAGELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWPD 185
           L+  + K G +D+A +VF+ M  + +++W  M+S  +      +A  +F  M  +G+ PD
Sbjct: 518 LIDMYAKCGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLXSGIRPD 577

Query: 186 EVTMVSMISACADMGDVEMGRMVHRFVEEN-GFGWMVALCNALVDMYGKCGCLEQAWCVF 362
            VT +++++A    G V+ G  +   ++ + G    V     +VDM G+ G LE+A+ + 
Sbjct: 578 GVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLI 637

Query: 363 NGMKRK-SLITWNTMMMVCANHGYADDAFRLFEWMI 467
             M    + + W  ++  C  +G  +   R+ + +I
Sbjct: 638 TSMSMPCNDVVWGALLAACRIYGDVEMGERVLKKLI 673



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 4/149 (2%)
 Frame = +3

Query: 30  GELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWPDEVTMVSMI 209
           G L  A R+F ++ + +   +  ++ GYS++  P +++ LF +MR   V PD  T   ++
Sbjct: 289 GCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLL 348

Query: 210 SACA----DMGDVEMGRMVHRFVEENGFGWMVALCNALVDMYGKCGCLEQAWCVFNGMKR 377
              +    D+  +     +H  V + GF + + + NAL+ +Y   G    A  VFN M  
Sbjct: 349 KGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVG 408

Query: 378 KSLITWNTMMMVCANHGYADDAFRLFEWM 464
             +++W+ +++     G  + A ++F+ M
Sbjct: 409 ADVVSWSGLVVAHVRAGELELARQVFDEM 437


>ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 663

 Score =  250 bits (639), Expect = 8e-65
 Identities = 121/176 (68%), Positives = 144/176 (81%)
 Frame = +3

Query: 3   GLLVAHVKAGELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWP 182
           GL+VAHV+AGEL++AR+VF EMPERDVVSWTVM+SGY+QAK   EAL LFREMR  GV P
Sbjct: 357 GLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRP 416

Query: 183 DEVTMVSMISACADMGDVEMGRMVHRFVEENGFGWMVALCNALVDMYGKCGCLEQAWCVF 362
           DEV MVS+ISAC  +GD+E G  VHR+++ENGFGWMV+LCNAL+DMY KCGC++ AW VF
Sbjct: 417 DEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVF 476

Query: 363 NGMKRKSLITWNTMMMVCANHGYADDAFRLFEWMISSGGAVPDCWTILALLVAYAH 530
           N M+RKSLITWN+M+  CANHG A+DAFR+F  M+ S G  PD  T LALL AY H
Sbjct: 477 NNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYS-GIRPDGVTFLALLTAYTH 531



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
 Frame = +3

Query: 6   LLVAHVKAGELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWPD 185
           L+  + K G +D+A +VF+ M  + +++W  M+S  +      +A  +F  M  +G+ PD
Sbjct: 459 LIDMYAKCGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPD 518

Query: 186 EVTMVSMISACADMGDVEMGRMVHRFVEEN-GFGWMVALCNALVDMYGKCGCLEQAWCVF 362
            VT +++++A    G V+ G  +   ++ + G    V     +VDM G+ G LE+A+ + 
Sbjct: 519 GVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLI 578

Query: 363 NGMKRK-SLITWNTMMMVCANHGYADDAFRLFEWMI 467
             M    + + W  ++  C  +G  +   R+ + +I
Sbjct: 579 TSMSMPCNDVVWGALLAACRIYGDVEMGERVLKKLI 614



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
 Frame = +3

Query: 30  GELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWPDEVTMVSMI 209
           G L  A R+F ++ + +   +  ++ GYS++  P +++ LF +MR   V PD  T   ++
Sbjct: 230 GCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLL 289

Query: 210 SACA----DMGDVEMGRMVHRFVEENGFGWMVALCNALVDMYGKCGCLEQAWCVFNGMKR 377
              +    D+  +     +H  V + GF + + + NAL+ +Y   G    A  VFN M  
Sbjct: 290 KGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVG 349

Query: 378 KSLITWNTMMMVCANHGYADDAFRLF 455
             +++W+ +++     G  + A ++F
Sbjct: 350 ADVVSWSGLVVAHVRAGELELARQVF 375


>emb|CBI22251.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  250 bits (639), Expect = 8e-65
 Identities = 121/176 (68%), Positives = 144/176 (81%)
 Frame = +3

Query: 3   GLLVAHVKAGELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWP 182
           GL+VAHV+AGEL++AR+VF EMPERDVVSWTVM+SGY+QAK   EAL LFREMR  GV P
Sbjct: 170 GLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRP 229

Query: 183 DEVTMVSMISACADMGDVEMGRMVHRFVEENGFGWMVALCNALVDMYGKCGCLEQAWCVF 362
           DEV MVS+ISAC  +GD+E G  VHR+++ENGFGWMV+LCNAL+DMY KCGC++ AW VF
Sbjct: 230 DEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVF 289

Query: 363 NGMKRKSLITWNTMMMVCANHGYADDAFRLFEWMISSGGAVPDCWTILALLVAYAH 530
           N M+RKSLITWN+M+  CANHG A+DAFR+F  M+ S G  PD  T LALL AY H
Sbjct: 290 NNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYS-GIRPDGVTFLALLTAYTH 344



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
 Frame = +3

Query: 6   LLVAHVKAGELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWPD 185
           L+  + K G +D+A +VF+ M  + +++W  M+S  +      +A  +F  M  +G+ PD
Sbjct: 272 LIDMYAKCGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPD 331

Query: 186 EVTMVSMISACADMGDVEMGRMVHRFVEEN-GFGWMVALCNALVDMYGKCGCLEQAWCVF 362
            VT +++++A    G V+ G  +   ++ + G    V     +VDM G+ G LE+A+ + 
Sbjct: 332 GVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLI 391

Query: 363 NGMKRK-SLITWNTMMMVCANHGYADDAFRLFEWMI 467
             M    + + W  ++  C  +G  +   R+ + +I
Sbjct: 392 TSMSMPCNDVVWGALLAACRIYGDVEMGERVLKKLI 427



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
 Frame = +3

Query: 30  GELDIARRVFDEMPERDVVSWTVMLSGYSQAKLPGEALALFREMRLAGVWPDEVTMVSMI 209
           G L  A R+F ++ + +   +  ++ GYS++  P +++ LF +MR   V PD  T   ++
Sbjct: 43  GCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLL 102

Query: 210 SACA----DMGDVEMGRMVHRFVEENGFGWMVALCNALVDMYGKCGCLEQAWCVFNGMKR 377
              +    D+  +     +H  V + GF + + + NAL+ +Y   G    A  VFN M  
Sbjct: 103 KGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVG 162

Query: 378 KSLITWNTMMMVCANHGYADDAFRLF 455
             +++W+ +++     G  + A ++F
Sbjct: 163 ADVVSWSGLVVAHVRAGELELARQVF 188