BLASTX nr result

ID: Glycyrrhiza24_contig00025132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025132
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...    86   2e-15
ref|XP_003601404.1| F-box protein SKIP19 [Medicago truncatula] g...    86   4e-15
ref|XP_004158685.1| PREDICTED: putative F-box/LRR-repeat protein...    84   9e-15
ref|XP_004134905.1| PREDICTED: putative F-box/LRR-repeat protein...    84   9e-15
ref|XP_003590154.1| F-box protein SKIP19 [Medicago truncatula] g...    82   6e-14

>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
 Frame = +3

Query: 9   LGAVEIVTIARRVCNLWRNICNDPLMWRTIDMSYICIFRYEFDY--AKICRFAVDQSCGH 182
           LG VEI+T A+ VC+ WR IC DPLMWR IDM Y C + ++ DY   ++CR AV +SCG 
Sbjct: 32  LGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDW-WDMDYNLEELCRQAVKRSCGQ 90

Query: 183 LEDLNLEIIGSDDLLKYI 236
           L   N+E  G+DDLL YI
Sbjct: 91  LIHFNIEHFGTDDLLLYI 108


>ref|XP_003601404.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355490452|gb|AES71655.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 203

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 45/77 (58%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = +3

Query: 9   LGAVEIVTIARRVCNLWRNICNDPLMWRTIDMSYICIFRYEF-DYAKICRFAVDQSCGHL 185
           LG +EIVT A RVC  W NIC DPLMWRTI M YI I  Y + D  KIC  A + SCGHL
Sbjct: 80  LGTLEIVTSACRVCPQWWNICKDPLMWRTIRMCYIRISPYAYVDLWKICCIAFELSCGHL 139

Query: 186 EDLNLEIIGSDDLLKYI 236
           ED++++    DDLLK I
Sbjct: 140 EDIDIKRFCIDDLLKCI 156


>ref|XP_004158685.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 273

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   HMLGAVEIVTIARRVCNLWRNICNDPLMWRTIDMSYICIFRYEFDYAKI-CRFAVDQSCG 179
           H LGA+EI+T A+ VC+LW  IC DP +WR IDM         FD+ +I C+ AVD+SCG
Sbjct: 25  HKLGAIEILTTAQNVCSLWYKICKDPFLWRVIDMHNSGDLN-SFDHLEIMCKHAVDRSCG 83

Query: 180 HLEDLNLEIIGSDDLLKYI 236
            L ++N+E  GSD+LL YI
Sbjct: 84  QLVEINIEHFGSDELLLYI 102


>ref|XP_004134905.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 277

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3   HMLGAVEIVTIARRVCNLWRNICNDPLMWRTIDMSYICIFRYEFDYAKI-CRFAVDQSCG 179
           H LGA+EI+T A+ VC+LW  IC DP +WR IDM         FD+ +I C+ AVD+SCG
Sbjct: 25  HKLGAIEILTTAQNVCSLWYKICKDPFLWRVIDMHNSGDLN-SFDHLEIMCKHAVDRSCG 83

Query: 180 HLEDLNLEIIGSDDLLKYI 236
            L ++N+E  GSD+LL YI
Sbjct: 84  QLVEINIEHFGSDELLLYI 102


>ref|XP_003590154.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355479202|gb|AES60405.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 285

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
 Frame = +3

Query: 9   LGAVEIVTIARRVCNLWRNICNDPLMWRTIDMSYICIFRY----EFDYAKICRFAVDQSC 176
           L  +EIVT   +VC LW NIC DPLMWRTI M     + Y      D   ICR+AV++SC
Sbjct: 38  LDTIEIVTSVCQVCPLWWNICKDPLMWRTISMIKSSHYHYPEWLHMDLEMICRYAVERSC 97

Query: 177 GHLEDLNLEIIGSDDLLKYI 236
           G L+++++E   +DDL KYI
Sbjct: 98  GQLQEIDIEFFLTDDLFKYI 117


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