BLASTX nr result

ID: Glycyrrhiza24_contig00025129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025129
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242024.1| uncharacterized protein LOC100810534 [Glycin...   219   2e-55
ref|XP_003555983.1| PREDICTED: PXMP2/4 family protein 4-like [Gl...   218   4e-55
ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis] gi...   201   7e-50
ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-49
ref|XP_002313168.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-49

>ref|NP_001242024.1| uncharacterized protein LOC100810534 [Glycine max]
           gi|255639865|gb|ACU20225.1| unknown [Glycine max]
          Length = 248

 Score =  219 bits (557), Expect = 2e-55
 Identities = 104/112 (92%), Positives = 107/112 (95%)
 Frame = +3

Query: 3   DIIRTLRMAGYGMVILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVVFFS 182
           D IRT RMAGYGMVILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTV FFS
Sbjct: 116 DFIRTSRMAGYGMVILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVTFFS 175

Query: 183 LNARLQGETGKEIVARLKRDLLPTMLNGVMYWPVCDFITFRFIPVHLQPLVS 338
           LNARLQGETG EI ARLKRDLLPTML+G+MYWP+CDFITFRFIPVHLQPLVS
Sbjct: 176 LNARLQGETGSEIAARLKRDLLPTMLSGIMYWPICDFITFRFIPVHLQPLVS 227


>ref|XP_003555983.1| PREDICTED: PXMP2/4 family protein 4-like [Glycine max]
          Length = 250

 Score =  218 bits (555), Expect = 4e-55
 Identities = 102/112 (91%), Positives = 108/112 (96%)
 Frame = +3

Query: 3   DIIRTLRMAGYGMVILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVVFFS 182
           D +RT RMAGYG+VILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTV+FFS
Sbjct: 118 DFVRTSRMAGYGIVILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVIFFS 177

Query: 183 LNARLQGETGKEIVARLKRDLLPTMLNGVMYWPVCDFITFRFIPVHLQPLVS 338
           LNARLQGETG EI ARLKRDLLPTML+G+MYWP+CDFITFRFIPVHLQPLVS
Sbjct: 178 LNARLQGETGSEIAARLKRDLLPTMLSGIMYWPICDFITFRFIPVHLQPLVS 229


>ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis]
           gi|223533132|gb|EEF34890.1| Protein SYM1, putative
           [Ricinus communis]
          Length = 268

 Score =  201 bits (510), Expect = 7e-50
 Identities = 89/112 (79%), Positives = 105/112 (93%)
 Frame = +3

Query: 3   DIIRTLRMAGYGMVILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVVFFS 182
           D++RTLRMAGYGM++LGP+LHFWFNFVS+ FP+RDL +T KK+++GQT+YGPAMT +FFS
Sbjct: 133 DLVRTLRMAGYGMLVLGPTLHFWFNFVSRQFPKRDLITTFKKIILGQTVYGPAMTALFFS 192

Query: 183 LNARLQGETGKEIVARLKRDLLPTMLNGVMYWPVCDFITFRFIPVHLQPLVS 338
           LNA LQGE G EIVARLKRDLLPTM+NGVMYWP+CDFITF+FIPVHLQPLVS
Sbjct: 193 LNACLQGENGSEIVARLKRDLLPTMMNGVMYWPICDFITFKFIPVHLQPLVS 244


>ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|222846025|gb|EEE83572.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  199 bits (506), Expect = 2e-49
 Identities = 89/112 (79%), Positives = 104/112 (92%)
 Frame = +3

Query: 3   DIIRTLRMAGYGMVILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVVFFS 182
           D++RTLRMAGYG++I+GPSLHFWF FVSKL P+RDL +T KK++MGQT+YGP MTVVFFS
Sbjct: 57  DLVRTLRMAGYGLLIVGPSLHFWFKFVSKLLPKRDLITTFKKILMGQTIYGPIMTVVFFS 116

Query: 183 LNARLQGETGKEIVARLKRDLLPTMLNGVMYWPVCDFITFRFIPVHLQPLVS 338
           LNARLQGE   EI+ARLKRDL+PTM+NGVMYWPVCDF+TF+FIPVHLQPLVS
Sbjct: 117 LNARLQGENSAEIIARLKRDLVPTMINGVMYWPVCDFVTFKFIPVHLQPLVS 168


>ref|XP_002313168.1| predicted protein [Populus trichocarpa] gi|222849576|gb|EEE87123.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  198 bits (504), Expect = 3e-49
 Identities = 89/112 (79%), Positives = 103/112 (91%)
 Frame = +3

Query: 3   DIIRTLRMAGYGMVILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVVFFS 182
           D++R LRMAGYG++I+GPSLHFWFNFVSKLFP+RDL +T KK++MGQT+YGP MTVVFFS
Sbjct: 57  DLVRILRMAGYGLLIIGPSLHFWFNFVSKLFPKRDLITTFKKIIMGQTIYGPIMTVVFFS 116

Query: 183 LNARLQGETGKEIVARLKRDLLPTMLNGVMYWPVCDFITFRFIPVHLQPLVS 338
            NA LQGE   EI+ARLKRDLLPTM+NGVMYWPVCDF+TF+FIPVHLQPLVS
Sbjct: 117 SNACLQGENSAEIIARLKRDLLPTMINGVMYWPVCDFVTFKFIPVHLQPLVS 168


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