BLASTX nr result

ID: Glycyrrhiza24_contig00025127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025127
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   336   3e-90
ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   330   2e-88
ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   261   8e-68
ref|XP_002265806.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   197   1e-48
emb|CAN67276.1| hypothetical protein VITISV_042515 [Vitis vinifera]   197   1e-48

>ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
          Length = 1052

 Score =  336 bits (861), Expect = 3e-90
 Identities = 177/245 (72%), Positives = 189/245 (77%)
 Frame = +1

Query: 1    QHDSHELLRCLLDGLSTEELAGRKHNGSPKRDGTSSNTLVDALFGGQISSTVCCIECGHF 180
            QHDSHELLRCLLDGLSTEELAGRK +GSPK DGTSSNTLVDALFGGQISSTVCCIECGHF
Sbjct: 381  QHDSHELLRCLLDGLSTEELAGRKQSGSPKGDGTSSNTLVDALFGGQISSTVCCIECGHF 440

Query: 181  STVYEPFLDLSLPVPTKKPPPRKAQQVPRXXXXXXXXXXXXXTRVKVNRDADPLPVXXXX 360
            STVYEPFLDLS+PVPTKKPPP KAQQVPR             TRV+VNRD  PLPV    
Sbjct: 441  STVYEPFLDLSVPVPTKKPPPCKAQQVPRTKKAKLPPKKGGKTRVRVNRDTYPLPVQTQS 500

Query: 361  XXXXXXXXXCPDQSITLVAEKMVASSADSTVLGSEAISSVANKEDLSSPNLDTGGESQHM 540
                     CPDQS+  VA +M   SADST+LGSE I SVA+KEDLSSPNL T GESQHM
Sbjct: 501  NQLSSSESSCPDQSVISVAGEMGTCSADSTLLGSEEIKSVADKEDLSSPNLVTPGESQHM 560

Query: 541  QVLDTSANKISDSSDDFAWLDYVEAGTTIDECAFISQKEDAPEVQDTESKDECVNEFPEQ 720
            QVLD  A K   +SD F+WLDYVEAGT  +EC FISQKEDAPEVQ TESKDEC+NE   Q
Sbjct: 561  QVLDNGAIK---TSDGFSWLDYVEAGT--NECDFISQKEDAPEVQGTESKDECLNELHGQ 615

Query: 721  ASCET 735
            A CE+
Sbjct: 616  AICES 620


>ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
          Length = 980

 Score =  330 bits (845), Expect = 2e-88
 Identities = 174/245 (71%), Positives = 186/245 (75%)
 Frame = +1

Query: 1    QHDSHELLRCLLDGLSTEELAGRKHNGSPKRDGTSSNTLVDALFGGQISSTVCCIECGHF 180
            QHDSHELLRCLLDGLSTEELAGRK NGSPKRDGTSSNTLVDALFGG ISSTVCCIECGHF
Sbjct: 310  QHDSHELLRCLLDGLSTEELAGRKQNGSPKRDGTSSNTLVDALFGGLISSTVCCIECGHF 369

Query: 181  STVYEPFLDLSLPVPTKKPPPRKAQQVPRXXXXXXXXXXXXXTRVKVNRDADPLPVXXXX 360
            STVYEPFLDLSLPVPTKKPPPRKAQQ PR              RV+VNRD D LPV    
Sbjct: 370  STVYEPFLDLSLPVPTKKPPPRKAQQEPRTKKAKLPPKKGGKIRVRVNRDTDSLPVQTQS 429

Query: 361  XXXXXXXXXCPDQSITLVAEKMVASSADSTVLGSEAISSVANKEDLSSPNLDTGGESQHM 540
                     C DQSI  VA +M   SADST+L SE I SVA+KEDLSSPNL T GESQH 
Sbjct: 430  NQLSSPESSCLDQSIISVAGEMGTCSADSTLLVSEEIKSVADKEDLSSPNLVTAGESQHT 489

Query: 541  QVLDTSANKISDSSDDFAWLDYVEAGTTIDECAFISQKEDAPEVQDTESKDECVNEFPEQ 720
            QV+D  A K   + D+F+WLDYVEAG   +EC FISQKEDAPEVQDTESKDEC+NE   Q
Sbjct: 490  QVIDNGAMK---TLDEFSWLDYVEAGA--NECDFISQKEDAPEVQDTESKDECLNELHGQ 544

Query: 721  ASCET 735
            A+CE+
Sbjct: 545  ATCES 549


>ref|XP_003601616.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355490664|gb|AES71867.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 1070

 Score =  261 bits (668), Expect = 8e-68
 Identities = 170/347 (48%), Positives = 181/347 (52%), Gaps = 102/347 (29%)
 Frame = +1

Query: 1    QHDSHELLRCLLDGLSTEELAGRKHNGSPKRDGTSSNTLVDALFGGQISSTVCCIECGHF 180
            QHDSHELLRCLLDGLSTEELAGRK NGS KRDGTSS TLVDALFGGQISSTVCC ECGH 
Sbjct: 311  QHDSHELLRCLLDGLSTEELAGRKQNGSLKRDGTSSKTLVDALFGGQISSTVCCNECGHS 370

Query: 181  STVYEPFLDLSLPVPTKKPPPRKAQQVPRXXXXXXXXXXXXXTRVKVNRDADPLPVXXXX 360
            STVYEPFLDLSLPVPTKKPPPRKAQ  PR             +RVKVNRD DPLPV    
Sbjct: 371  STVYEPFLDLSLPVPTKKPPPRKAQPAPRTRKTKPPPKKGAKSRVKVNRDVDPLPV---- 426

Query: 361  XXXXXXXXXCPDQSITLVAEKMVASSADSTVLGSEAISS--------------------- 477
                     C DQS+T  A ++V SS  STVLGSE ISS                     
Sbjct: 427  -QNIPSQSSCLDQSVTSGAGELVISSGVSTVLGSEEISSEAKVNRDDDPLPTQNVPSQSS 485

Query: 478  --------------------------VANKEDLSS---------PNLDTGGESQHMQVLD 552
                                      V   E++SS          NL T  ESQ +Q  D
Sbjct: 486  SHESSCPDQSVTSVAGELVASSGVSTVLGSEEISSEANKEDLSPSNLVTVVESQQIQGFD 545

Query: 553  TSANKISDSSDDFA---------------------------------------------- 594
            + A K SDSSD FA                                              
Sbjct: 546  SVATKTSDSSDAFAWLDFVEAETNEEDLSPPNLVTVGESQQMQGLDSVANKTSDSSDDFP 605

Query: 595  WLDYVEAGTTIDECAFISQKEDAPEVQDTESKDECVNEFPEQASCET 735
            WLDYVEA TTIDE A ISQKEDA EVQD+E+KDE +  FPEQ SCET
Sbjct: 606  WLDYVEAETTIDEYASISQKEDALEVQDSENKDERLTAFPEQGSCET 652


>ref|XP_002265806.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 1-like [Vitis
           vinifera]
          Length = 950

 Score =  197 bits (502), Expect = 1e-48
 Identities = 118/258 (45%), Positives = 144/258 (55%), Gaps = 14/258 (5%)
 Frame = +1

Query: 1   QHDSHELLRCLLDGLSTEELAGRKHNGSPKRDGTSSN---TLVDALFGGQISSTVCCIEC 171
           Q DSHELLRCLLDGL TEEL  RK   S + DG S N   T VD +FGGQISSTVCC+EC
Sbjct: 229 QQDSHELLRCLLDGLCTEELGARKRANSSQEDGISPNEAPTFVDTMFGGQISSTVCCVEC 288

Query: 172 GHFSTVYEPFLDLSLPVPTKKPPPRKAQQVPRXXXXXXXXXXXXXTRVKVNRDADPLPVX 351
           GH STVYEPFLDLSLPVPTKKPP RK Q V R              R KVN+DAD L   
Sbjct: 289 GHSSTVYEPFLDLSLPVPTKKPPSRKTQPVSRPKKTKLPPKKAGRVRSKVNKDADSLVAL 348

Query: 352 XXXXXXXXXXXXCPDQSITLVAEKMVASSADSTVLGSEAIS--SVANKEDLSSPNLDTGG 525
                          QS   VAEK+V+SS DS   GS+ +S  +VA+ +D  S N+ T  
Sbjct: 349 SVQHPSSDGDSSNQIQSSAPVAEKLVSSSGDSA--GSDLVSPCAVADVKDSVSKNISTSE 406

Query: 526 ESQHMQVLDTSAN---------KISDSSDDFAWLDYVEAGTTIDECAFISQKEDAPEVQD 678
           E ++ QV +              + D SD F WLDY++ G  +D     SQ +D   +QD
Sbjct: 407 EFENKQVFENVTETKAAPSDDFTLLDCSDTFTWLDYLDPGAVLDVHNVASQNKDVSVIQD 466

Query: 679 TESKDECVNEFPEQASCE 732
           + ++D   N+   Q + E
Sbjct: 467 SGNQDNVQNDVLLQNASE 484


>emb|CAN67276.1| hypothetical protein VITISV_042515 [Vitis vinifera]
          Length = 1036

 Score =  197 bits (502), Expect = 1e-48
 Identities = 118/258 (45%), Positives = 144/258 (55%), Gaps = 14/258 (5%)
 Frame = +1

Query: 1    QHDSHELLRCLLDGLSTEELAGRKHNGSPKRDGTSSN---TLVDALFGGQISSTVCCIEC 171
            Q DSHELLRCLLDGL TEEL  RK   S + DG S N   T VD +FGGQISSTVCC+EC
Sbjct: 315  QQDSHELLRCLLDGLCTEELGARKRANSSQEDGISPNEAPTFVDTMFGGQISSTVCCVEC 374

Query: 172  GHFSTVYEPFLDLSLPVPTKKPPPRKAQQVPRXXXXXXXXXXXXXTRVKVNRDADPLPVX 351
            GH STVYEPFLDLSLPVPTKKPP RK Q V R              R KVN+DAD L   
Sbjct: 375  GHSSTVYEPFLDLSLPVPTKKPPSRKTQPVSRPKKTKLPPKKAGRVRSKVNKDADSLVAQ 434

Query: 352  XXXXXXXXXXXXCPDQSITLVAEKMVASSADSTVLGSEAIS--SVANKEDLSSPNLDTGG 525
                           QS   VAEK+V+SS DS   GS+ +S  +VA+ +D  S N+ T  
Sbjct: 435  SVQHPSSDGDSSNQIQSSAPVAEKLVSSSGDSA--GSDLVSPCAVADVKDSVSKNISTSE 492

Query: 526  ESQHMQVLDTSAN---------KISDSSDDFAWLDYVEAGTTIDECAFISQKEDAPEVQD 678
            E ++ QV +              + D SD F WLDY++ G  +D     SQ +D   +QD
Sbjct: 493  EFENKQVFENVTETKAAPSDDFTLLDCSDTFTWLDYLDPGAVLDVHNVASQNKDVSVIQD 552

Query: 679  TESKDECVNEFPEQASCE 732
            + ++D   N+   Q + E
Sbjct: 553  SGNQDNVQNDVLLQNASE 570


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