BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025124
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628782.1| Pentatricopeptide repeat-containing protein ...   129   3e-28
ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containi...   127   9e-28
emb|CBI28135.3| unnamed protein product [Vitis vinifera]              122   2e-26
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26
gb|AEP33741.1| chlororespiratory reduction 21, partial [Thlaspi ...   118   6e-25

>ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522804|gb|AET03258.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1002

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/84 (75%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
 Frame = +1

Query: 1   SWAAIVGLHARMGRSEEALLGYVEMQENGFGPDNFVVPIALKACGALQWIRFGKGVHGYA 180
           S+AAIVGL AR G  +EALL YVEM E GF PDNFVVP  LKACG L+WI FG+G+HG+ 
Sbjct: 174 SYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFV 233

Query: 181 VKMMN-FDGCVYVATSLVDMYGKC 249
           VKM N FDGCVYVATSLVDMYGKC
Sbjct: 234 VKMGNEFDGCVYVATSLVDMYGKC 257


>ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score =  127 bits (319), Expect = 9e-28
 Identities = 56/83 (67%), Positives = 66/83 (79%)
 Frame = +1

Query: 1   SWAAIVGLHARMGRSEEALLGYVEMQENGFGPDNFVVPIALKACGALQWIRFGKGVHGYA 180
           SWAAI+GLH R G  EEAL GY++MQ++G  PDNFV+P  LKACG L+W+RFGKGVH + 
Sbjct: 121 SWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFV 180

Query: 181 VKMMNFDGCVYVATSLVDMYGKC 249
           VK +    CVYVATSLVDMYGKC
Sbjct: 181 VKTIGLKECVYVATSLVDMYGKC 203


>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/83 (71%), Positives = 68/83 (81%)
 Frame = +1

Query: 1    SWAAIVGLHARMGRSEEALLGYVEMQENGFGPDNFVVPIALKACGALQWIRFGKGVHGYA 180
            SWAAIVGL  RMG SE+ALLG++EMQENG  PDNFV+P  LKACG+LQ I  GKGVHGY 
Sbjct: 1244 SWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYV 1303

Query: 181  VKMMNFDGCVYVATSLVDMYGKC 249
            +K M F  CV+V++SLVDMYGKC
Sbjct: 1304 LK-MGFGACVFVSSSLVDMYGKC 1325


>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/83 (71%), Positives = 68/83 (81%)
 Frame = +1

Query: 1   SWAAIVGLHARMGRSEEALLGYVEMQENGFGPDNFVVPIALKACGALQWIRFGKGVHGYA 180
           SWAAIVGL  RMG SE+ALLG++EMQENG  PDNFV+P  LKACG+LQ I  GKGVHGY 
Sbjct: 149 SWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYV 208

Query: 181 VKMMNFDGCVYVATSLVDMYGKC 249
           +K M F  CV+V++SLVDMYGKC
Sbjct: 209 LK-MGFGACVFVSSSLVDMYGKC 230


>gb|AEP33741.1| chlororespiratory reduction 21, partial [Thlaspi arvense]
          Length = 732

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/83 (67%), Positives = 64/83 (77%)
 Frame = +1

Query: 1   SWAAIVGLHARMGRSEEALLGYVEMQENGFGPDNFVVPIALKACGALQWIRFGKGVHGYA 180
           SWAAI+G+  R+G  E AL+G+VEM ENG  PDNFVVP   KACGALQW RFG+GVHGY 
Sbjct: 120 SWAAIIGVKCRIGLVEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYV 179

Query: 181 VKMMNFDGCVYVATSLVDMYGKC 249
           VK   F  CV+VA+SL DMYGKC
Sbjct: 180 VK-AGFHDCVFVASSLADMYGKC 201



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/83 (39%), Positives = 49/83 (59%)
 Frame = +1

Query: 1   SWAAIVGLHARMGRSEEALLGYVEMQENGFGPDNFVVPIALKACGALQWIRFGKGVHGYA 180
           SW  ++    + G SEEA+L   +MQE+G  P+ F + +AL AC  L  + +G+ +HGY 
Sbjct: 493 SWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNVFSITVALSACANLASLHYGRSIHGYI 552

Query: 181 VKMMNFDGCVYVATSLVDMYGKC 249
           ++       V + TSLVDMY KC
Sbjct: 553 IRNQRHCSSVSIETSLVDMYAKC 575