BLASTX nr result

ID: Glycyrrhiza24_contig00025123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025123
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFR34361.1| hypothetical protein GlmaxMp54 (mitochondrion) [G...   192   2e-47
ref|YP_006291791.1| orf59 gene product (mitochondrion) [Daucus c...   179   2e-43
ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medica...   113   6e-42
ref|YP_717128.1| hypothetical protein BrnapMp031 [Brassica napus...   173   1e-41
ref|XP_003588406.1| hypothetical protein MTR_1g006900 [Medicago ...   111   2e-41

>gb|AFR34361.1| hypothetical protein GlmaxMp54 (mitochondrion) [Glycine max]
          Length = 101

 Score =  192 bits (489), Expect = 2e-47
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = +1

Query: 13  MCSNFWPCTDHLMDHGLNGHCLKGLCPVDRRPPTRYISRLWAAITIQEDTRNWKDKQTHP 192
           MCSNFWPCTDHLMDHGLNGHCLKGLCPVDRRPPTRYISRLWAAITIQEDTRNWKDKQTHP
Sbjct: 1   MCSNFWPCTDHLMDHGLNGHCLKGLCPVDRRPPTRYISRLWAAITIQEDTRNWKDKQTHP 60

Query: 193 VDCRATSPTTQERDSLKSQGRGWP 264
           VDCRATSPTTQERDSLKSQGRGWP
Sbjct: 61  VDCRATSPTTQERDSLKSQGRGWP 84


>ref|YP_006291791.1| orf59 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374082012|gb|AEY81204.1| orf59 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 101

 Score =  179 bits (454), Expect = 2e-43
 Identities = 79/84 (94%), Positives = 80/84 (95%)
 Frame = +1

Query: 13  MCSNFWPCTDHLMDHGLNGHCLKGLCPVDRRPPTRYISRLWAAITIQEDTRNWKDKQTHP 192
           MCSNFWPCT+H  D GLNGHCLKGLCP DRRPPTRYISRLWAAITIQEDTRNWKDKQTHP
Sbjct: 1   MCSNFWPCTNHPTDPGLNGHCLKGLCPGDRRPPTRYISRLWAAITIQEDTRNWKDKQTHP 60

Query: 193 VDCRATSPTTQERDSLKSQGRGWP 264
           VDCRATSPTTQERDSLKSQGRGWP
Sbjct: 61  VDCRATSPTTQERDSLKSQGRGWP 84


>ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477359|gb|AES58562.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 548

 Score =  113 bits (282), Expect(2) = 6e-42
 Identities = 52/53 (98%), Positives = 52/53 (98%)
 Frame = +1

Query: 106 PPTRYISRLWAAITIQEDTRNWKDKQTHPVDCRATSPTTQERDSLKSQGRGWP 264
           PPTRYISRLWAAITIQEDTRN KDKQTHPVDCRATSPTTQERDSLKSQGRGWP
Sbjct: 479 PPTRYISRLWAAITIQEDTRNRKDKQTHPVDCRATSPTTQERDSLKSQGRGWP 531



 Score = 82.8 bits (203), Expect(2) = 6e-42
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = +3

Query: 3   SGINVFQFLALHRPSNGPWTKRPLPERTMSRGPPPP 110
           SGINVFQFLALHRPSNGPWTKRPLPERTMSRGPPPP
Sbjct: 444 SGINVFQFLALHRPSNGPWTKRPLPERTMSRGPPPP 479


>ref|YP_717128.1| hypothetical protein BrnapMp031 [Brassica napus]
           gi|353526372|ref|YP_004927445.1| orf115b (mitochondrion)
           [Brassica oleracea] gi|353526719|ref|YP_004927890.1|
           orf115b (mitochondrion) [Brassica rapa subsp.
           campestris] gi|353531401|ref|YP_004927793.1| orf115b
           (mitochondrion) [Brassica juncea]
           gi|37591075|dbj|BAC98877.1| hypothetical protein
           [Brassica napus] gi|335354907|gb|AEH43463.1| orf115b
           [Brassica rapa subsp. campestris]
           gi|335354917|gb|AEH43472.1| orf115b [Brassica oleracea]
           gi|335355134|gb|AEH43687.1| orf115b [Brassica juncea]
           gi|339511336|emb|CBX48391.1| unnamed protein product
           [Brassica napus]
          Length = 115

 Score =  173 bits (439), Expect = 1e-41
 Identities = 79/85 (92%), Positives = 79/85 (92%), Gaps = 1/85 (1%)
 Frame = +1

Query: 13  MCSNFWPCTDHLMDHGLNGHCLKGLCPVDRRPP-TRYISRLWAAITIQEDTRNWKDKQTH 189
           MCS FWPCT HLMDHGLNGHCLK LCP DRRPP TRYISRLWAAITIQEDTRNWKDKQTH
Sbjct: 1   MCSIFWPCTSHLMDHGLNGHCLKRLCPGDRRPPPTRYISRLWAAITIQEDTRNWKDKQTH 60

Query: 190 PVDCRATSPTTQERDSLKSQGRGWP 264
           PVDCRATS TTQERDSLKSQGRGWP
Sbjct: 61  PVDCRATSSTTQERDSLKSQGRGWP 85


>ref|XP_003588406.1| hypothetical protein MTR_1g006900 [Medicago truncatula]
           gi|355477454|gb|AES58657.1| hypothetical protein
           MTR_1g006900 [Medicago truncatula]
          Length = 160

 Score =  111 bits (278), Expect(2) = 2e-41
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = +1

Query: 106 PPTRYISRLWAAITIQEDTRNWKDKQTHPVDCRATSPTTQERDSLKSQGRGWP 264
           PPTRYISRLWAAITIQEDTRN KDKQTHPVDCRA+SPTTQERDSLKSQGRGWP
Sbjct: 91  PPTRYISRLWAAITIQEDTRNRKDKQTHPVDCRASSPTTQERDSLKSQGRGWP 143



 Score = 82.8 bits (203), Expect(2) = 2e-41
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = +3

Query: 3   SGINVFQFLALHRPSNGPWTKRPLPERTMSRGPPPP 110
           SGINVFQFLALHRPSNGPWTKRPLPERTMSRGPPPP
Sbjct: 56  SGINVFQFLALHRPSNGPWTKRPLPERTMSRGPPPP 91


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