BLASTX nr result

ID: Glycyrrhiza24_contig00025118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025118
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535577.1| PREDICTED: ABC transporter C family member 1...   120   9e-26
ref|XP_003548999.1| PREDICTED: ABC transporter C family member 1...   116   2e-24
ref|XP_003549000.1| PREDICTED: ABC transporter C family member 1...   114   8e-24
ref|XP_003536438.1| PREDICTED: ABC transporter C family member 1...   100   1e-19
ref|XP_003636752.1| Multidrug resistance protein ABC transporter...    99   5e-19

>ref|XP_003535577.1| PREDICTED: ABC transporter C family member 10-like, partial
           [Glycine max]
          Length = 1509

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/111 (55%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
 Frame = +2

Query: 77  KKMEDIWSMICGEYSGCSETGGK--RYDFKFLKDPSTCISHVFIIFFDVXXXXXXXXXXX 250
           KKME  WSM CG+ SGC+ETGG    YDFKFLKDPSTC++H+  I  +V           
Sbjct: 29  KKMEGFWSMFCGK-SGCAETGGNPCNYDFKFLKDPSTCVNHLLFICINVLLLIMILFTIL 87

Query: 251 XKSWSRDSRPFWSLVRYSKLQLVSAITNGSLGLFHLCLGIWVLEEKLRKTR 403
            KS  + S+    +  YSKLQLVSAI NGSLGL HLC GIW+LEE LR+T+
Sbjct: 88  KKSSQKPSQGLIQVQSYSKLQLVSAIANGSLGLIHLCSGIWLLEENLRRTQ 138


>ref|XP_003548999.1| PREDICTED: ABC transporter C family member 10-like [Glycine max]
          Length = 1478

 Score =  116 bits (291), Expect = 2e-24
 Identities = 63/111 (56%), Positives = 73/111 (65%), Gaps = 5/111 (4%)
 Frame = +2

Query: 83  MEDIWSMICGEYSGCSETGGKR--YDFKFLKDPSTCISHVFIIFFDVXXXXXXXXXXXXK 256
           ME+ WSMICG+ S CSE+G K   YDF  L DPS C +H+ +I FDV            K
Sbjct: 1   MENFWSMICGD-SSCSESGRKTFCYDFNLLGDPSKCFNHLLVICFDVLLLIMLSLNMIRK 59

Query: 257 SWSRDSRPFWSLVR---YSKLQLVSAITNGSLGLFHLCLGIWVLEEKLRKT 400
           S    SRPFW L+R   YS LQLVSAI NG+LG+ HLCLGIW+L EKLRKT
Sbjct: 60  S---SSRPFWPLIRMQSYSNLQLVSAIINGTLGVLHLCLGIWILGEKLRKT 107


>ref|XP_003549000.1| PREDICTED: ABC transporter C family member 10-like [Glycine max]
          Length = 1481

 Score =  114 bits (285), Expect = 8e-24
 Identities = 64/110 (58%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
 Frame = +2

Query: 83  MEDIWSMICGEYSGCSETGGKR---YDFKFLKDPSTCISHVFIIFFDVXXXXXXXXXXXX 253
           MED WSM CGE S C  TGGK    YDFKFLKDPSTC +   II FD+            
Sbjct: 1   MEDFWSMFCGE-SDCPGTGGKPPFCYDFKFLKDPSTCTNQFLIICFDLLLLIMLAFILIQ 59

Query: 254 KSWSRDSRPF-WSLVRYSKLQLVSAITNGSLGLFHLCLGIWVLEEKLRKT 400
            S  R  R   + L R+S LQL+SAI NGSLGL HLCLGIWVLEEKLRK+
Sbjct: 60  NSLFRPFRGHQFGLARFSNLQLISAIINGSLGLLHLCLGIWVLEEKLRKS 109


>ref|XP_003536438.1| PREDICTED: ABC transporter C family member 10-like [Glycine max]
          Length = 1479

 Score =  100 bits (249), Expect = 1e-19
 Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
 Frame = +2

Query: 83  MEDIWSMICGEYSGCSETGGK--RYDFKFLKDPSTCISHVFIIFFDVXXXXXXXXXXXXK 256
           M   WS+ CGE SGCSE G     YDF+ L DPSTC++H+    FDV            K
Sbjct: 1   MAGFWSVFCGE-SGCSEAGRMPCSYDFRLLIDPSTCVNHLLNSCFDVLLLIMLACIMIQK 59

Query: 257 SWSRDSRPFWSLVRYSKLQLVSAITNGSLGLFHLCLGIWVLEEKLRKTR 403
           S  + SR    + RYS  QLVSAI NG+LGL  LC GIWVLEEKLRK +
Sbjct: 60  SSLKPSRGLTQVQRYSYFQLVSAIANGALGLTLLCFGIWVLEEKLRKNQ 108


>ref|XP_003636752.1| Multidrug resistance protein ABC transporter family, partial
           [Medicago truncatula] gi|355502687|gb|AES83890.1|
           Multidrug resistance protein ABC transporter family,
           partial [Medicago truncatula]
          Length = 1011

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 55/108 (50%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
 Frame = +2

Query: 83  MEDIWSMICGEY-SGCSETGGKRYDFKF--LKDPSTCISHVFIIFFDVXXXXXXXXXXXX 253
           MED W++ICG+  S CS  GGK + F    L +PS+CI+H+ IIF ++            
Sbjct: 1   MEDFWNVICGDDDSACSLLGGKPFCFNLEVLTNPSSCINHLLIIFLNLLLLIMLTFVTIQ 60

Query: 254 KSWSRDSRPFWSLVRYSKLQLVSAITNGSLGLFHLCLGIWVLEEKLRK 397
           KS  +  +    +  YSKLQLVSAITNGSLGL HL LGIW+LEEKLRK
Sbjct: 61  KSLVKSIQGQNRVESYSKLQLVSAITNGSLGLLHLFLGIWILEEKLRK 108


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