BLASTX nr result
ID: Glycyrrhiza24_contig00025115
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00025115
(287 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003589699.1| Pentatricopeptide repeat-containing protein ... 158 4e-37
emb|CBI22850.3| unnamed protein product [Vitis vinifera] 128 4e-28
ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containi... 128 4e-28
ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containi... 128 6e-28
ref|XP_002314968.1| predicted protein [Populus trichocarpa] gi|2... 127 1e-27
>ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 806
Score = 158 bits (400), Expect = 4e-37
Identities = 74/95 (77%), Positives = 85/95 (89%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
PVVPVYNALIHG+CKEC+ +EAFDLM EMV +GVDPNV+SYST+ISCLSDMG++ LSLAV
Sbjct: 242 PVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAV 301
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRVGDALGL 285
F +M VRGC PNV TFTSLIKG F+ GRVGDA+GL
Sbjct: 302 FGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGL 336
Score = 63.5 bits (153), Expect = 2e-08
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P V YN LIHGLC + ++EA + +M + PNV +YSTII + GD+ +
Sbjct: 347 PNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACET 406
Query: 181 FAQMLVRGCSPNVHTFTSLI 240
+ +M+ GC PNV +T ++
Sbjct: 407 WNKMINCGCRPNVVVYTCMV 426
Score = 60.5 bits (145), Expect = 1e-07
Identities = 30/95 (31%), Positives = 48/95 (50%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P V VY ++ LC+ ++AFDL+ M+ G P V++++ I L G + ++ V
Sbjct: 417 PNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNV 476
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRVGDALGL 285
QM C PN+ T+ L+ G F +A GL
Sbjct: 477 LDQMEKYECLPNIRTYNELLDGLFRANAFREACGL 511
Score = 55.5 bits (132), Expect = 5e-06
Identities = 30/95 (31%), Positives = 46/95 (48%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P V Y+ +I+G K + A + +M+ G PNVV Y+ ++ L M + +
Sbjct: 382 PNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDL 441
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRVGDALGL 285
M+ GC P V TF + IKG GRV A+ +
Sbjct: 442 IDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNV 476
>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 128 bits (322), Expect = 4e-28
Identities = 62/93 (66%), Positives = 75/93 (80%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P VPVYNALI+G+CKE EEAF L+ EM+ KG+DPNV+SY+TII+ LSD G++ LSLAV
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRVGDAL 279
A+M RGCSPN+HTFTSLIKG FL G +AL
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
Score = 61.2 bits (147), Expect = 8e-08
Identities = 32/92 (34%), Positives = 51/92 (55%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P + + +LI G + EA D M+ +GV PNVV+Y+ ++ L +G +++V
Sbjct: 314 PNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSV 373
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRVGDA 276
F QM + GC PNV T+++LI G G + A
Sbjct: 374 FNQMEINGCCPNVRTYSALIDGYAKAGDLDGA 405
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P V YNAL+HGLC + + +A + +M G PNV +YS +I + GD+ + V
Sbjct: 349 PNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEV 408
Query: 181 FAQMLVRGCSPNVHTFTSLI 240
+ M+ GC PNV +T ++
Sbjct: 409 WNWMITHGCHPNVVAYTCMV 428
Score = 58.9 bits (141), Expect = 4e-07
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P YN L+ L K+ + EAF L+K+M +G++ N+V+Y+TII G +G +L +
Sbjct: 489 PNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALEL 548
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRVGDALGL 285
+M+VRG P+ T +I G+V A+ L
Sbjct: 549 LGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583
Score = 58.2 bits (139), Expect = 7e-07
Identities = 30/95 (31%), Positives = 47/95 (49%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P V Y ++ LC+ +A+ L++ M + PN V+++T I L G + ++ V
Sbjct: 419 PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRVGDALGL 285
F QM GC PN T+ L+ R G+A GL
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513
Score = 55.1 bits (131), Expect = 6e-06
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P V YN L+ LCK +++ A L+ EM KG DP+ VSY+T+IS L +G +
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV-----K 233
Query: 181 FAQMLVRGCSPNVHTFTSLIKG 246
A+ L +P+V + +LI G
Sbjct: 234 EARELAMSFTPSVPVYNALING 255
>ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 128 bits (322), Expect = 4e-28
Identities = 62/93 (66%), Positives = 75/93 (80%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P VPVYNALI+G+CKE EEAF L+ EM+ KG+DPNV+SY+TII+ LSD G++ LSLAV
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRVGDAL 279
A+M RGCSPN+HTFTSLIKG FL G +AL
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
Score = 61.2 bits (147), Expect = 8e-08
Identities = 32/92 (34%), Positives = 51/92 (55%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P + + +LI G + EA D M+ +GV PNVV+Y+ ++ L +G +++V
Sbjct: 314 PNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSV 373
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRVGDA 276
F QM + GC PNV T+++LI G G + A
Sbjct: 374 FNQMEINGCCPNVRTYSALIDGYAKAGDLDGA 405
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P V YNAL+HGLC + + +A + +M G PNV +YS +I + GD+ + V
Sbjct: 349 PNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEV 408
Query: 181 FAQMLVRGCSPNVHTFTSLI 240
+ M+ GC PNV +T ++
Sbjct: 409 WNWMITHGCHPNVVAYTCMV 428
Score = 58.9 bits (141), Expect = 4e-07
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P YN L+ L K+ + EAF L+K+M +G++ N+V+Y+TII G +G +L +
Sbjct: 489 PNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALEL 548
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRVGDALGL 285
+M+VRG P+ T +I G+V A+ L
Sbjct: 549 LGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583
Score = 58.2 bits (139), Expect = 7e-07
Identities = 30/95 (31%), Positives = 47/95 (49%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P V Y ++ LC+ +A+ L++ M + PN V+++T I L G + ++ V
Sbjct: 419 PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKV 478
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRVGDALGL 285
F QM GC PN T+ L+ R G+A GL
Sbjct: 479 FDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513
Score = 55.1 bits (131), Expect = 6e-06
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P V YN L+ LCK +++ A L+ EM KG DP+ VSY+T+IS L +G +
Sbjct: 179 PNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV-----K 233
Query: 181 FAQMLVRGCSPNVHTFTSLIKG 246
A+ L +P+V + +LI G
Sbjct: 234 EARELAMSFTPSVPVYNALING 255
>ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 128 bits (321), Expect = 6e-28
Identities = 62/94 (65%), Positives = 77/94 (81%)
Frame = +1
Query: 4 VVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAVF 183
VV V NALI GLC+E ++ E F LM EMVG GVDPNVVSYS++IS LSD+G++ L+LAV
Sbjct: 246 VVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVL 305
Query: 184 AQMLVRGCSPNVHTFTSLIKGQFLGGRVGDALGL 285
+M+ RGC PNVHTF+SL+KG FLGGRVG+ +GL
Sbjct: 306 GKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGL 339
Score = 60.8 bits (146), Expect = 1e-07
Identities = 32/89 (35%), Positives = 46/89 (51%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P V Y+ L+HG K ++ A ++ +MV GV PNVV Y++++ L + +
Sbjct: 386 PNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRL 445
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRV 267
M GC P V TF + IKG GGRV
Sbjct: 446 IDNMATDGCPPTVVTFNTFIKGLCCGGRV 474
>ref|XP_002314968.1| predicted protein [Populus trichocarpa] gi|222864008|gb|EEF01139.1|
predicted protein [Populus trichocarpa]
Length = 662
Score = 127 bits (319), Expect = 1e-27
Identities = 57/93 (61%), Positives = 79/93 (84%)
Frame = +1
Query: 7 VPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAVFA 186
VPVYNALI+G C+E K+EE F+L EM +G+DP+V++YST+I+ LS+MG++ ++LAV A
Sbjct: 243 VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLA 302
Query: 187 QMLVRGCSPNVHTFTSLIKGQFLGGRVGDALGL 285
+M +RGCSPNVHTFTSL+KG F+GGR+ +AL L
Sbjct: 303 KMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDL 335
Score = 62.8 bits (151), Expect = 3e-08
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P YN LIHGLC K+ EA + ++M GV PN +YST+I + GD+ + +
Sbjct: 346 PNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEI 405
Query: 181 FAQMLVRGCSPNVHTFTSLI 240
+ +M+ GC PNV +T ++
Sbjct: 406 WNKMITNGCLPNVVVYTCMV 425
Score = 56.2 bits (134), Expect = 3e-06
Identities = 29/93 (31%), Positives = 45/93 (48%)
Frame = +1
Query: 1 PVVPVYNALIHGLCKECKIEEAFDLMKEMVGKGVDPNVVSYSTIISCLSDMGDIGLSLAV 180
P V VY ++ LC+ A L++ M PN ++++T I L G ++ V
Sbjct: 416 PNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKV 475
Query: 181 FAQMLVRGCSPNVHTFTSLIKGQFLGGRVGDAL 279
QM GC+PNV T+ ++ G F R +AL
Sbjct: 476 LNQMRQYGCAPNVTTYNEVLDGLFNAKRTREAL 508