BLASTX nr result

ID: Glycyrrhiza24_contig00025114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025114
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528332.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe...   190   9e-47
ref|XP_002301541.1| predicted protein [Populus trichocarpa] gi|2...   161   4e-38
ref|XP_002515211.1| conserved hypothetical protein [Ricinus comm...   147   9e-34
ref|XP_002272765.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe...   146   1e-33
emb|CBI37009.3| unnamed protein product [Vitis vinifera]              139   3e-31

>ref|XP_003528332.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM13 homolog
           [Glycine max]
          Length = 456

 Score =  190 bits (483), Expect = 9e-47
 Identities = 90/103 (87%), Positives = 92/103 (89%)
 Frame = +1

Query: 76  METKRCKFWLPTKNRFCANSPLNGSLFCGNHNSRPQEQWIPCPIDPSHSVLEQNLKGHVK 255
           METKRC FWLP KNRFCAN PLNGSLFCGNHNSR Q QWIPCPIDPSHSVL+QNLKGHVK
Sbjct: 1   METKRCNFWLPNKNRFCANCPLNGSLFCGNHNSRSQGQWIPCPIDPSHSVLKQNLKGHVK 60

Query: 256 RCPMLKQVQSLSLQPFYQKGINAGSDGEQEEETLGVDDSRLST 384
           RCP+LKQVQSLS QPFY KGINAGSDG  EEET GVDDSRL T
Sbjct: 61  RCPLLKQVQSLSDQPFYDKGINAGSDG--EEETSGVDDSRLPT 101


>ref|XP_002301541.1| predicted protein [Populus trichocarpa] gi|222843267|gb|EEE80814.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score =  161 bits (408), Expect = 4e-38
 Identities = 71/91 (78%), Positives = 78/91 (85%)
 Frame = +1

Query: 76  METKRCKFWLPTKNRFCANSPLNGSLFCGNHNSRPQEQWIPCPIDPSHSVLEQNLKGHVK 255
           ME  RCKFWLP KNRFCANSPLN S FCGNH  R  EQWIPCPIDPSHSVL++NL+ HVK
Sbjct: 1   MEENRCKFWLPKKNRFCANSPLNDSQFCGNHKPRSTEQWIPCPIDPSHSVLKENLESHVK 60

Query: 256 RCPMLKQVQSLSLQPFYQKGINAGSDGEQEE 348
           RCP+LKQ QSLSLQPFYQKGINAG + E+E+
Sbjct: 61  RCPLLKQAQSLSLQPFYQKGINAGKEEEEED 91


>ref|XP_002515211.1| conserved hypothetical protein [Ricinus communis]
           gi|223545691|gb|EEF47195.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 438

 Score =  147 bits (371), Expect = 9e-34
 Identities = 64/90 (71%), Positives = 74/90 (82%)
 Frame = +1

Query: 76  METKRCKFWLPTKNRFCANSPLNGSLFCGNHNSRPQEQWIPCPIDPSHSVLEQNLKGHVK 255
           ME  RCKFWLP KNR CAN+PL+ S FCGNH  R   QWIPCPID SHSVL++NL+GH+K
Sbjct: 1   MEEHRCKFWLPKKNRSCANTPLSDSPFCGNHTQRCNGQWIPCPIDSSHSVLKENLEGHIK 60

Query: 256 RCPMLKQVQSLSLQPFYQKGINAGSDGEQE 345
           RCP+LKQ QSLSLQPFYQKGINAG + + +
Sbjct: 61  RCPLLKQTQSLSLQPFYQKGINAGKEDDDD 90


>ref|XP_002272765.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM13 homolog
           [Vitis vinifera]
          Length = 465

 Score =  146 bits (369), Expect = 1e-33
 Identities = 62/91 (68%), Positives = 72/91 (79%)
 Frame = +1

Query: 88  RCKFWLPTKNRFCANSPLNGSLFCGNHNSRPQEQWIPCPIDPSHSVLEQNLKGHVKRCPM 267
           RC FWLP K RFCAN  +N S+FCGNHN+R   +W+PCPIDPSHSVL +NL+GH+KRCP+
Sbjct: 4   RCSFWLPKKKRFCANFRINDSVFCGNHNTRSDAEWVPCPIDPSHSVLSENLEGHMKRCPL 63

Query: 268 LKQVQSLSLQPFYQKGINAGSDGEQEEETLG 360
           LKQ QSLS QPFYQKGIN G D E E +  G
Sbjct: 64  LKQAQSLSSQPFYQKGINGGKDDEDEGDEKG 94


>emb|CBI37009.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score =  139 bits (349), Expect = 3e-31
 Identities = 58/79 (73%), Positives = 67/79 (84%)
 Frame = +1

Query: 88  RCKFWLPTKNRFCANSPLNGSLFCGNHNSRPQEQWIPCPIDPSHSVLEQNLKGHVKRCPM 267
           RC FWLP K RFCAN  +N S+FCGNHN+R   +W+PCPIDPSHSVL +NL+GH+KRCP+
Sbjct: 4   RCSFWLPKKKRFCANFRINDSVFCGNHNTRSDAEWVPCPIDPSHSVLSENLEGHMKRCPL 63

Query: 268 LKQVQSLSLQPFYQKGINA 324
           LKQ QSLS QPFYQKGINA
Sbjct: 64  LKQAQSLSSQPFYQKGINA 82


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