BLASTX nr result

ID: Glycyrrhiza24_contig00025093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025093
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547913.1| PREDICTED: pre-rRNA-processing protein esf1-...   322   9e-86
ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]             314   2e-83
ref|XP_003608503.1| Pre-rRNA-processing protein ESF1 [Medicago t...   306   6e-81
ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-...   265   1e-68
emb|CBI25839.3| unnamed protein product [Vitis vinifera]              264   3e-68

>ref|XP_003547913.1| PREDICTED: pre-rRNA-processing protein esf1-like [Glycine max]
          Length = 696

 Score =  322 bits (825), Expect = 9e-86
 Identities = 173/324 (53%), Positives = 196/324 (60%), Gaps = 5/324 (1%)
 Frame = +3

Query: 3    TSQLDTYRHYYKIDVEE-----DENKVXXXXXXXXXXXXXXXXXXXAIXXXXXXXXXXXX 167
            TSQL + RHYYK+D +E     DE +                     +            
Sbjct: 94   TSQLGSLRHYYKVDEKEVEQSSDEEEDNEEELVKANRMKPESDKGTELEETSESESEETS 153

Query: 168  XXXXXXXXXXXXAPDMQEKVEQIEKETHRLAVVNMDWRYVKAVDLYVLLSSFAPPNGLIK 347
                          D +E +  I+KETHR+AVVNMDWRYVKAVDLYVLLSSF PPNGLIK
Sbjct: 154  ESESDVDTDTDEGADEEEDIATIDKETHRVAVVNMDWRYVKAVDLYVLLSSFVPPNGLIK 213

Query: 348  AVAVYPTEFGLQRMKEEEVHGPISLFGXXXXXXXXXXXXXXXXXXXLREYEKSRMRYYFA 527
            +V VYP+EFGLQRMKEEEVHGPI LF                    LR YEKSRMRYYFA
Sbjct: 214  SVTVYPSEFGLQRMKEEEVHGPIGLFDDEDEKNDEDSSNDDIDNEKLRAYEKSRMRYYFA 273

Query: 528  LVECDSCNTADHIYKECDGIEFLHSSNPLDLRFIPDNMEFKQPPRDVATEAPANYECKDF 707
            +VECDS  TA++IYKECDG+E   SSN LDLRFIPDNMEFK PPRDVATE PANYECKDF
Sbjct: 274  VVECDSSATANYIYKECDGLELKQSSNALDLRFIPDNMEFKHPPRDVATEVPANYECKDF 333

Query: 708  YSRALQHSNVDLTWDEDEPLRAKTLKRKLNDEQLAQLELNEFLXXXXXXXXXXXXXXXXX 887
            YSRALQHS V+LTWD+DEPLRAKTLK+K  D+QLAQ+E+ EFL                 
Sbjct: 334  YSRALQHSEVNLTWDDDEPLRAKTLKQKFTDDQLAQMEVKEFLTSDESESDDSKDNNETD 393

Query: 888  XQPXXXXXXXXXXXXLLVSGNGSD 959
             QP            LL +G+ SD
Sbjct: 394  DQPDKRAKKRAKYRALLQAGDDSD 417


>ref|XP_003520147.1| PREDICTED: ESF1 homolog [Glycine max]
          Length = 695

 Score =  314 bits (804), Expect = 2e-83
 Identities = 177/327 (54%), Positives = 195/327 (59%), Gaps = 8/327 (2%)
 Frame = +3

Query: 3    TSQLDTYRHYYKIDV--------EEDENKVXXXXXXXXXXXXXXXXXXXAIXXXXXXXXX 158
            TSQL + RHYYKID         EE+EN+                               
Sbjct: 94   TSQLGSLRHYYKIDEKEVEQSSDEEEENEEELLKANQVKPESDKGTESEETSESESEETS 153

Query: 159  XXXXXXXXXXXXXXXAPDMQEKVEQIEKETHRLAVVNMDWRYVKAVDLYVLLSSFAPPNG 338
                           A D +E +  I+KETHR+AVVNMDWRYVKAVDLYVLLSSF PPNG
Sbjct: 154  ESESDVDTDTETDEGA-DEEEDIATIDKETHRVAVVNMDWRYVKAVDLYVLLSSFVPPNG 212

Query: 339  LIKAVAVYPTEFGLQRMKEEEVHGPISLFGXXXXXXXXXXXXXXXXXXXLREYEKSRMRY 518
            LIK+V VYP+EFGLQRMKEEEV GPI LF                    LR YEKSRMRY
Sbjct: 213  LIKSVRVYPSEFGLQRMKEEEVRGPIGLFDDEDSSNDDLDNEK------LRAYEKSRMRY 266

Query: 519  YFALVECDSCNTADHIYKECDGIEFLHSSNPLDLRFIPDNMEFKQPPRDVATEAPANYEC 698
            YFA+VECDS  TA++IYKECDG+E   SSN LDLRFIPDNMEFK PPRDVATE PANYEC
Sbjct: 267  YFAVVECDSSATANYIYKECDGLELKQSSNALDLRFIPDNMEFKHPPRDVATEVPANYEC 326

Query: 699  KDFYSRALQHSNVDLTWDEDEPLRAKTLKRKLNDEQLAQLELNEFLXXXXXXXXXXXXXX 878
            KDFYSRALQHS V+LTWD+DEPLRAKTL RKL DEQLA+ E+ EFL              
Sbjct: 327  KDFYSRALQHSEVNLTWDDDEPLRAKTLNRKLTDEQLAEFEVKEFLTSDESESDDSKDNN 386

Query: 879  XXXXQPXXXXXXXXXXXXLLVSGNGSD 959
                QP            LL SG+ SD
Sbjct: 387  ETDDQPDKMAKKRAKYRALLQSGDDSD 413


>ref|XP_003608503.1| Pre-rRNA-processing protein ESF1 [Medicago truncatula]
           gi|355509558|gb|AES90700.1| Pre-rRNA-processing protein
           ESF1 [Medicago truncatula]
          Length = 737

 Score =  306 bits (783), Expect = 6e-81
 Identities = 154/221 (69%), Positives = 170/221 (76%), Gaps = 11/221 (4%)
 Frame = +3

Query: 207 PDMQEKVEQIEKETHRLAVVNMDWRYVKAVDLYVLLSSFAPPNGLIKAVAVYPTEFGLQR 386
           P++QE+V +IEKETHRLAVVNMDWRYVKAVDLYVL SS AP +GLIK+V +YPTEFGLQR
Sbjct: 200 PEIQEEVAEIEKETHRLAVVNMDWRYVKAVDLYVLFSSLAPTSGLIKSVTIYPTEFGLQR 259

Query: 387 MKEEEVHGPISLF-----------GXXXXXXXXXXXXXXXXXXXLREYEKSRMRYYFALV 533
           M EEEV GP+ LF                               LR YEKSRMRYYFALV
Sbjct: 260 MNEEEVKGPVGLFDGENKRSDEDGSAEEETDEEDFHDSDSDNEKLRAYEKSRMRYYFALV 319

Query: 534 ECDSCNTADHIYKECDGIEFLHSSNPLDLRFIPDNMEFKQPPRDVATEAPANYECKDFYS 713
           ECDS  TADHIYKE DG+EF HSSNPLDLRFIPD+MEFKQPP+DVA+E PANYE KDFYS
Sbjct: 320 ECDSSATADHIYKENDGVEFEHSSNPLDLRFIPDDMEFKQPPKDVASEIPANYENKDFYS 379

Query: 714 RALQHSNVDLTWDEDEPLRAKTLKRKLNDEQLAQLELNEFL 836
           RALQHS V+LTWDEDEPLRA TLKRK  DEQLAQLE++E +
Sbjct: 380 RALQHSKVELTWDEDEPLRANTLKRKFTDEQLAQLEMDELI 420


>ref|XP_002269957.2| PREDICTED: pre-rRNA-processing protein esf1-like [Vitis vinifera]
          Length = 726

 Score =  265 bits (677), Expect = 1e-68
 Identities = 137/255 (53%), Positives = 171/255 (67%)
 Frame = +3

Query: 204 APDMQEKVEQIEKETHRLAVVNMDWRYVKAVDLYVLLSSFAPPNGLIKAVAVYPTEFGLQ 383
           +P  +E +  IE+ETHRLAVVNM+WR VKAVDL+++LSSF P +G I +VA+YP+EFGL+
Sbjct: 172 SPAQEENIPVIEQETHRLAVVNMEWRQVKAVDLFMVLSSFLPKDGHILSVAIYPSEFGLK 231

Query: 384 RMKEEEVHGPISLFGXXXXXXXXXXXXXXXXXXXLREYEKSRMRYYFALVECDSCNTADH 563
           RM+EE VHGPI LF                    LR YEKSR+ YY+A+V+CDS  TAD+
Sbjct: 232 RMEEEAVHGPIGLFDDEKEQSDDDGDNEIDDEK-LRAYEKSRLSYYYAVVDCDSSATADY 290

Query: 564 IYKECDGIEFLHSSNPLDLRFIPDNMEFKQPPRDVATEAPANYECKDFYSRALQHSNVDL 743
           +YK CDGIEF  SSN LDLRFIPD+MEFK PP D+ATEAPA YE  DF++RALQHS + +
Sbjct: 291 LYKACDGIEFERSSNVLDLRFIPDSMEFKHPPHDIATEAPAKYEGLDFHTRALQHSKIHI 350

Query: 744 TWDEDEPLRAKTLKRKLNDEQLAQLELNEFLXXXXXXXXXXXXXXXXXXQPXXXXXXXXX 923
           +WDEDEP RAKTLKRK ND+++A+L + EFL                  Q          
Sbjct: 351 SWDEDEPQRAKTLKRKYNDDEVAELAMKEFL--ASDTDESETDDNENDDQSDKEHKRQNK 408

Query: 924 XXXLLVSGNGSDEED 968
              LL SG+GSD +D
Sbjct: 409 YLALLESGDGSDRDD 423


>emb|CBI25839.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score =  264 bits (674), Expect = 3e-68
 Identities = 137/255 (53%), Positives = 170/255 (66%)
 Frame = +3

Query: 204 APDMQEKVEQIEKETHRLAVVNMDWRYVKAVDLYVLLSSFAPPNGLIKAVAVYPTEFGLQ 383
           +P  +E +  IE+ETHRLAVVNM+WR VKAVDL+++LSSF P +G I +VA+YP+EFGL+
Sbjct: 172 SPAQEENIPVIEQETHRLAVVNMEWRQVKAVDLFMVLSSFLPKDGHILSVAIYPSEFGLK 231

Query: 384 RMKEEEVHGPISLFGXXXXXXXXXXXXXXXXXXXLREYEKSRMRYYFALVECDSCNTADH 563
           RM+EE VHGPI LF                    LR YEKSR+ YY+A+V+CDS  TAD+
Sbjct: 232 RMEEEAVHGPIGLFDDEKEQSDDDGDNEIDDEK-LRAYEKSRLSYYYAVVDCDSSATADY 290

Query: 564 IYKECDGIEFLHSSNPLDLRFIPDNMEFKQPPRDVATEAPANYECKDFYSRALQHSNVDL 743
           +YK CDGIEF  SSN LDLRFIPD+MEFK PP D+ATEAPA YE  DF++RALQHS + +
Sbjct: 291 LYKACDGIEFERSSNVLDLRFIPDSMEFKHPPHDIATEAPAKYEGLDFHTRALQHSKIHI 350

Query: 744 TWDEDEPLRAKTLKRKLNDEQLAQLELNEFLXXXXXXXXXXXXXXXXXXQPXXXXXXXXX 923
           +WDEDEP RAKTLKRK ND++ A+L + EFL                  Q          
Sbjct: 351 SWDEDEPQRAKTLKRKYNDDEQAELAMKEFL--ASDTDESETDDNENDDQSDKEHKRQNK 408

Query: 924 XXXLLVSGNGSDEED 968
              LL SG+GSD +D
Sbjct: 409 YLALLESGDGSDRDD 423


Top