BLASTX nr result
ID: Glycyrrhiza24_contig00025092
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00025092 (326 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max] 215 3e-54 ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795... 215 3e-54 ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3... 214 4e-54 ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251... 192 3e-47 gb|AFK45467.1| unknown [Medicago truncatula] 163 1e-45 >ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max] Length = 347 Score = 215 bits (548), Expect = 3e-54 Identities = 98/108 (90%), Positives = 102/108 (94%) Frame = +1 Query: 1 GGVECVTVGEDGRVNLVTVGNSNLNYRRLFDSGGLVSYTAAKWASPMEFATGGYGFGLQW 180 GGVECVTVGEDG+VNLV +G+SNLNYRRLFDS GLVSYTA WASPMEFATGGYGFGL W Sbjct: 128 GGVECVTVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVSWASPMEFATGGYGFGLHW 187 Query: 181 WDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSLGTV 324 WDQRKPGGPVSQFKGNWD+KL SGIVHSIDIHPSRKHTCLAGGSLGTV Sbjct: 188 WDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTV 235 >ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max] Length = 346 Score = 215 bits (547), Expect = 3e-54 Identities = 97/108 (89%), Positives = 104/108 (96%) Frame = +1 Query: 1 GGVECVTVGEDGRVNLVTVGNSNLNYRRLFDSGGLVSYTAAKWASPMEFATGGYGFGLQW 180 GGVECV+VGEDG+VNLV +G+SNLNYRRLFDS GLVSYTA +WASPMEFATGG+GFGLQW Sbjct: 130 GGVECVSVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVRWASPMEFATGGFGFGLQW 189 Query: 181 WDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSLGTV 324 WDQRKPGGPVSQFKGNWD+KL SGIVHSIDIHPSRKHTCLAGGSLGTV Sbjct: 190 WDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTV 237 >ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1| Nucleoporin Nup43 [Medicago truncatula] Length = 351 Score = 214 bits (546), Expect = 4e-54 Identities = 97/108 (89%), Positives = 103/108 (95%) Frame = +1 Query: 1 GGVECVTVGEDGRVNLVTVGNSNLNYRRLFDSGGLVSYTAAKWASPMEFATGGYGFGLQW 180 GGVECVTVG+DGR+NLVTVG+SNLNYRRLFDSGGLVSYT+ KWASP+EFATGGYGFGL W Sbjct: 131 GGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASPVEFATGGYGFGLHW 190 Query: 181 WDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSLGTV 324 WDQRKPGGPVSQFKGNWD+ L SGIVHSIDIHPSRKHTCLA GSLGTV Sbjct: 191 WDQRKPGGPVSQFKGNWDKNLNSGIVHSIDIHPSRKHTCLAAGSLGTV 238 >ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera] gi|297743697|emb|CBI36580.3| unnamed protein product [Vitis vinifera] Length = 357 Score = 192 bits (487), Expect = 3e-47 Identities = 90/108 (83%), Positives = 98/108 (90%), Gaps = 1/108 (0%) Frame = +1 Query: 4 GVECVTVGEDGRVNLVTVGN-SNLNYRRLFDSGGLVSYTAAKWASPMEFATGGYGFGLQW 180 GVECV+VGEDGRVNLV G+ S L+YRR++DS GLVSYTAAKWASP EFATGG+GFGLQW Sbjct: 137 GVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWASPTEFATGGFGFGLQW 196 Query: 181 WDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSLGTV 324 WD RKPGGPVSQFKGNW ++ SGIVHSIDIHPSRKHTCLAGGSLGTV Sbjct: 197 WDLRKPGGPVSQFKGNWAQRTTSGIVHSIDIHPSRKHTCLAGGSLGTV 244 >gb|AFK45467.1| unknown [Medicago truncatula] Length = 243 Score = 163 bits (412), Expect(2) = 1e-45 Identities = 71/80 (88%), Positives = 77/80 (96%) Frame = +1 Query: 1 GGVECVTVGEDGRVNLVTVGNSNLNYRRLFDSGGLVSYTAAKWASPMEFATGGYGFGLQW 180 GGVECVTVG+DGR+NLVTVG+SNLNYRRLFDSGGLVSYT+ KWASP+EFA GGYGFGL W Sbjct: 131 GGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASPVEFAAGGYGFGLHW 190 Query: 181 WDQRKPGGPVSQFKGNWDRK 240 WDQRKPGGPVSQFKGNWD+K Sbjct: 191 WDQRKPGGPVSQFKGNWDKK 210 Score = 45.4 bits (106), Expect(2) = 1e-45 Identities = 21/30 (70%), Positives = 22/30 (73%) Frame = +3 Query: 237 KIGFRDSALYRHSSITKAHLPCWWLLRYCF 326 K F DSA YRHSSI KA+L WLLRYCF Sbjct: 210 KFEFWDSAFYRHSSIKKAYLSGCWLLRYCF 239