BLASTX nr result

ID: Glycyrrhiza24_contig00025092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025092
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]   215   3e-54
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795...   215   3e-54
ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3...   214   4e-54
ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251...   192   3e-47
gb|AFK45467.1| unknown [Medicago truncatula]                          163   1e-45

>ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
          Length = 347

 Score =  215 bits (548), Expect = 3e-54
 Identities = 98/108 (90%), Positives = 102/108 (94%)
 Frame = +1

Query: 1   GGVECVTVGEDGRVNLVTVGNSNLNYRRLFDSGGLVSYTAAKWASPMEFATGGYGFGLQW 180
           GGVECVTVGEDG+VNLV +G+SNLNYRRLFDS GLVSYTA  WASPMEFATGGYGFGL W
Sbjct: 128 GGVECVTVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVSWASPMEFATGGYGFGLHW 187

Query: 181 WDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSLGTV 324
           WDQRKPGGPVSQFKGNWD+KL SGIVHSIDIHPSRKHTCLAGGSLGTV
Sbjct: 188 WDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTV 235


>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
          Length = 346

 Score =  215 bits (547), Expect = 3e-54
 Identities = 97/108 (89%), Positives = 104/108 (96%)
 Frame = +1

Query: 1   GGVECVTVGEDGRVNLVTVGNSNLNYRRLFDSGGLVSYTAAKWASPMEFATGGYGFGLQW 180
           GGVECV+VGEDG+VNLV +G+SNLNYRRLFDS GLVSYTA +WASPMEFATGG+GFGLQW
Sbjct: 130 GGVECVSVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVRWASPMEFATGGFGFGLQW 189

Query: 181 WDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSLGTV 324
           WDQRKPGGPVSQFKGNWD+KL SGIVHSIDIHPSRKHTCLAGGSLGTV
Sbjct: 190 WDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTV 237


>ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1|
           Nucleoporin Nup43 [Medicago truncatula]
          Length = 351

 Score =  214 bits (546), Expect = 4e-54
 Identities = 97/108 (89%), Positives = 103/108 (95%)
 Frame = +1

Query: 1   GGVECVTVGEDGRVNLVTVGNSNLNYRRLFDSGGLVSYTAAKWASPMEFATGGYGFGLQW 180
           GGVECVTVG+DGR+NLVTVG+SNLNYRRLFDSGGLVSYT+ KWASP+EFATGGYGFGL W
Sbjct: 131 GGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASPVEFATGGYGFGLHW 190

Query: 181 WDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSLGTV 324
           WDQRKPGGPVSQFKGNWD+ L SGIVHSIDIHPSRKHTCLA GSLGTV
Sbjct: 191 WDQRKPGGPVSQFKGNWDKNLNSGIVHSIDIHPSRKHTCLAAGSLGTV 238


>ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
           gi|297743697|emb|CBI36580.3| unnamed protein product
           [Vitis vinifera]
          Length = 357

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/108 (83%), Positives = 98/108 (90%), Gaps = 1/108 (0%)
 Frame = +1

Query: 4   GVECVTVGEDGRVNLVTVGN-SNLNYRRLFDSGGLVSYTAAKWASPMEFATGGYGFGLQW 180
           GVECV+VGEDGRVNLV  G+ S L+YRR++DS GLVSYTAAKWASP EFATGG+GFGLQW
Sbjct: 137 GVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWASPTEFATGGFGFGLQW 196

Query: 181 WDQRKPGGPVSQFKGNWDRKLASGIVHSIDIHPSRKHTCLAGGSLGTV 324
           WD RKPGGPVSQFKGNW ++  SGIVHSIDIHPSRKHTCLAGGSLGTV
Sbjct: 197 WDLRKPGGPVSQFKGNWAQRTTSGIVHSIDIHPSRKHTCLAGGSLGTV 244


>gb|AFK45467.1| unknown [Medicago truncatula]
          Length = 243

 Score =  163 bits (412), Expect(2) = 1e-45
 Identities = 71/80 (88%), Positives = 77/80 (96%)
 Frame = +1

Query: 1   GGVECVTVGEDGRVNLVTVGNSNLNYRRLFDSGGLVSYTAAKWASPMEFATGGYGFGLQW 180
           GGVECVTVG+DGR+NLVTVG+SNLNYRRLFDSGGLVSYT+ KWASP+EFA GGYGFGL W
Sbjct: 131 GGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASPVEFAAGGYGFGLHW 190

Query: 181 WDQRKPGGPVSQFKGNWDRK 240
           WDQRKPGGPVSQFKGNWD+K
Sbjct: 191 WDQRKPGGPVSQFKGNWDKK 210



 Score = 45.4 bits (106), Expect(2) = 1e-45
 Identities = 21/30 (70%), Positives = 22/30 (73%)
 Frame = +3

Query: 237 KIGFRDSALYRHSSITKAHLPCWWLLRYCF 326
           K  F DSA YRHSSI KA+L   WLLRYCF
Sbjct: 210 KFEFWDSAFYRHSSIKKAYLSGCWLLRYCF 239


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