BLASTX nr result

ID: Glycyrrhiza24_contig00025080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025080
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago t...   192   2e-47
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]   125   3e-27
gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]        125   4e-27
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26

>ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355501015|gb|AES82218.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 607

 Score =  192 bits (488), Expect = 2e-47
 Identities = 90/100 (90%), Positives = 97/100 (97%)
 Frame = +1

Query: 1   EHYSCMVDLYGRAGRFDEAENLIKNMPFEPDLVLWGALLAACGRHSNLELGEYAAEKIRK 180
           EHYSCMVDLYGRAGRFDEAENLIKNMPFEPD+VLWGALLAACG HSNLELGEYAAE+IR+
Sbjct: 406 EHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRR 465

Query: 181 LESDHPVSYSVLSKIQGEKGMWSSVNELRDMMKEKGVRKQ 300
           LES HPVSYSVLSKIQGEKG+WSSVNELRD MKE+G++KQ
Sbjct: 466 LESSHPVSYSVLSKIQGEKGVWSSVNELRDTMKERGIKKQ 505


>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  125 bits (315), Expect = 3e-27
 Identities = 56/107 (52%), Positives = 76/107 (71%)
 Frame = +1

Query: 1   EHYSCMVDLYGRAGRFDEAENLIKNMPFEPDLVLWGALLAACGRHSNLELGEYAAEKIRK 180
           EHY+CMV L  RAG+ ++A  +I+ MP  PD  +WGALL++C  H+N+ LGE AAEK+ +
Sbjct: 524 EHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFE 583

Query: 181 LESDHPVSYSVLSKIQGEKGMWSSVNELRDMMKEKGVRKQKAISWVE 321
           LE  +P +Y +LS I   KGMW+ VN +RDMMK KG+RK    SW+E
Sbjct: 584 LEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIE 630


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  125 bits (315), Expect = 3e-27
 Identities = 56/107 (52%), Positives = 76/107 (71%)
 Frame = +1

Query: 1   EHYSCMVDLYGRAGRFDEAENLIKNMPFEPDLVLWGALLAACGRHSNLELGEYAAEKIRK 180
           EHY+CMV L  RAG+ ++A  +I+ MP  PD  +WGALL++C  H+N+ LGE AAEK+ +
Sbjct: 524 EHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFE 583

Query: 181 LESDHPVSYSVLSKIQGEKGMWSSVNELRDMMKEKGVRKQKAISWVE 321
           LE  +P +Y +LS I   KGMW+ VN +RDMMK KG+RK    SW+E
Sbjct: 584 LEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIE 630


>gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/107 (52%), Positives = 77/107 (71%)
 Frame = +1

Query: 1   EHYSCMVDLYGRAGRFDEAENLIKNMPFEPDLVLWGALLAACGRHSNLELGEYAAEKIRK 180
           EHY+CMV L GRAG+ DEA +LI +MPFEPD  +WG+LL +C  H N++L E AAEK+  
Sbjct: 431 EHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFH 490

Query: 181 LESDHPVSYSVLSKIQGEKGMWSSVNELRDMMKEKGVRKQKAISWVE 321
           LE ++  +Y +LS I   K MW  VN +R+MMK+ G++K+K  SW+E
Sbjct: 491 LEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIE 537


>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/107 (51%), Positives = 75/107 (70%)
 Frame = +1

Query: 1   EHYSCMVDLYGRAGRFDEAENLIKNMPFEPDLVLWGALLAACGRHSNLELGEYAAEKIRK 180
           EHY+C+V L  R G+ +EA ++IK MPFEPD  +WGALL++C  H+NL LGE AAEK+  
Sbjct: 514 EHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFF 573

Query: 181 LESDHPVSYSVLSKIQGEKGMWSSVNELRDMMKEKGVRKQKAISWVE 321
           LE  +P +Y +LS I   KG+W   N +R++MK KG+RK    SW+E
Sbjct: 574 LEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIE 620


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