BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025059
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi...   125   9e-34
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-33
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   123   2e-33
emb|CBI33742.3| unnamed protein product [Vitis vinifera]              115   3e-31
ref|XP_002524945.1| pentatricopeptide repeat-containing protein,...   116   3e-31

>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  125 bits (315), Expect(2) = 9e-34
 Identities = 62/83 (74%), Positives = 68/83 (81%)
 Frame = +2

Query: 2   AYARGGDVVSAETLFDAMPQRSLVSLTAMLTCYAKHGRLREAWALLDGITEGEGDVVCWN 181
           AYARGGDV SA+ LFDAMP+RSLVS TAMLTCYAKHG L EA  L +G+  G  DVVCWN
Sbjct: 161 AYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGM--GMKDVVCWN 218

Query: 182 VMIDGYAQHGFPNECLLLFRKML 250
           VMIDGYAQHG PNE L+ FRKM+
Sbjct: 219 VMIDGYAQHGCPNEALVFFRKMM 241



 Score = 42.7 bits (99), Expect(2) = 9e-34
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = +1

Query: 259 G*ARPDEITVLAVLSSCGQLGALESG 336
           G  RP+EITV+AVLSSCGQ+GALE G
Sbjct: 250 GKVRPNEITVVAVLSSCGQVGALECG 275


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  123 bits (309), Expect(2) = 2e-33
 Identities = 60/87 (68%), Positives = 69/87 (79%)
 Frame = +2

Query: 5   YARGGDVVSAETLFDAMPQRSLVSLTAMLTCYAKHGRLREAWALLDGITEGEGDVVCWNV 184
           YARGGDVVSA+ LFD MP++SLVSLTAMLTCYAKHG L  A  L DG+ E +G  VCWNV
Sbjct: 169 YARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDG--VCWNV 226

Query: 185 MIDGYAQHGFPNECLLLFRKMLAEKVR 265
           MIDGY Q+G PNE L+LFR+ML  K +
Sbjct: 227 MIDGYTQNGMPNEALVLFRRMLKAKAK 253



 Score = 44.3 bits (103), Expect(2) = 2e-33
 Identities = 20/27 (74%), Positives = 25/27 (92%)
 Frame = +1

Query: 256 KG*ARPDEITVLAVLSSCGQLGALESG 336
           K  A+P+E+TVL+VLS+CGQLGALESG
Sbjct: 249 KAKAKPNEVTVLSVLSACGQLGALESG 275


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  123 bits (309), Expect(2) = 2e-33
 Identities = 60/87 (68%), Positives = 69/87 (79%)
 Frame = +2

Query: 5   YARGGDVVSAETLFDAMPQRSLVSLTAMLTCYAKHGRLREAWALLDGITEGEGDVVCWNV 184
           YARGGDVVSA+ LFD MP++SLVSLTAMLTCYAKHG L  A  L DG+ E +G  VCWNV
Sbjct: 116 YARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDG--VCWNV 173

Query: 185 MIDGYAQHGFPNECLLLFRKMLAEKVR 265
           MIDGY Q+G PNE L+LFR+ML  K +
Sbjct: 174 MIDGYTQNGMPNEALVLFRRMLKAKAK 200



 Score = 44.3 bits (103), Expect(2) = 2e-33
 Identities = 20/27 (74%), Positives = 25/27 (92%)
 Frame = +1

Query: 256 KG*ARPDEITVLAVLSSCGQLGALESG 336
           K  A+P+E+TVL+VLS+CGQLGALESG
Sbjct: 196 KAKAKPNEVTVLSVLSACGQLGALESG 222


>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  115 bits (289), Expect(2) = 3e-31
 Identities = 57/87 (65%), Positives = 67/87 (77%)
 Frame = +2

Query: 5   YARGGDVVSAETLFDAMPQRSLVSLTAMLTCYAKHGRLREAWALLDGITEGEGDVVCWNV 184
           +A  GDVVSA+ LFD MP++SLVSLTAMLTCYAKHG L  A  L DG+ E +G  VCWNV
Sbjct: 103 HALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDG--VCWNV 160

Query: 185 MIDGYAQHGFPNECLLLFRKMLAEKVR 265
           MIDGY Q+G PNE L+LFR+ML  K +
Sbjct: 161 MIDGYTQNGMPNEALVLFRRMLKAKAK 187



 Score = 44.3 bits (103), Expect(2) = 3e-31
 Identities = 20/27 (74%), Positives = 25/27 (92%)
 Frame = +1

Query: 256 KG*ARPDEITVLAVLSSCGQLGALESG 336
           K  A+P+E+TVL+VLS+CGQLGALESG
Sbjct: 183 KAKAKPNEVTVLSVLSACGQLGALESG 209


>ref|XP_002524945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535780|gb|EEF37442.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 417

 Score =  116 bits (291), Expect(2) = 3e-31
 Identities = 55/87 (63%), Positives = 69/87 (79%)
 Frame = +2

Query: 5   YARGGDVVSAETLFDAMPQRSLVSLTAMLTCYAKHGRLREAWALLDGITEGEGDVVCWNV 184
           YARGGD VSA  LFD +P++SLVS TAM+TC+AKHG ++EA  L DG+   + D+VCWNV
Sbjct: 173 YARGGDFVSARNLFDEIPEKSLVSSTAMITCFAKHGMVKEARVLFDGLE--DRDLVCWNV 230

Query: 185 MIDGYAQHGFPNECLLLFRKMLAEKVR 265
           MIDGY QHG  NE L+LFR+ML ++VR
Sbjct: 231 MIDGYVQHGLANEGLVLFRQMLKDRVR 257



 Score = 43.5 bits (101), Expect(2) = 3e-31
 Identities = 19/23 (82%), Positives = 22/23 (95%)
 Frame = +1

Query: 268 RPDEITVLAVLSSCGQLGALESG 336
           RP E+TVLAVLS+CGQ+GALESG
Sbjct: 257 RPSEVTVLAVLSACGQIGALESG 279