BLASTX nr result

ID: Glycyrrhiza24_contig00025043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025043
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622687.1| Tyrosyl-DNA phosphodiesterase [Medicago trun...   237   9e-61
ref|XP_003522514.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   202   4e-50
ref|XP_003522515.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   194   1e-47
ref|XP_004155668.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   177   1e-42
ref|XP_004134969.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   174   1e-41

>ref|XP_003622687.1| Tyrosyl-DNA phosphodiesterase [Medicago truncatula]
           gi|355497702|gb|AES78905.1| Tyrosyl-DNA
           phosphodiesterase [Medicago truncatula]
          Length = 849

 Score =  237 bits (605), Expect = 9e-61
 Identities = 126/187 (67%), Positives = 144/187 (77%), Gaps = 6/187 (3%)
 Frame = -2

Query: 546 MSSSHSQVGYLVPLNQNLEEAASAS--KLAVSDGTNVIGRNNLAVSDKRLSRKHLTITAS 373
           MS SHSQ+GYL+PLN N EE   AS  KL +SDGTN+IGRNN+ V+DKRLSRKHLTITAS
Sbjct: 1   MSFSHSQIGYLIPLNPNSEEKEKASTPKLTISDGTNIIGRNNVPVNDKRLSRKHLTITAS 60

Query: 372 TDGTANLHVEGTNPVVVNSGNKRRKLNSKETATISDGDIIELIPGHHVFKYQVLLRGGEK 193
            DGTANLHVEGTNPVVVNSGNKRRKLNSK+TA I DGD+IELIPGH++FKYQV  R    
Sbjct: 61  ADGTANLHVEGTNPVVVNSGNKRRKLNSKQTAAIFDGDVIELIPGHYLFKYQVSQR---- 116

Query: 192 GSSSGVHNEAHD-GIETLSVKRGRNAVAQKAG---HCEEAIRDFHVADDQMPCTFRLLRV 25
            S     N+ H+ G  + + +  + AV QK G    CEE IRDF VADDQ+PCTFRLLRV
Sbjct: 117 -SPKVADNKHHERGKNSATQRHDKIAVTQKHGSSRSCEEPIRDFRVADDQIPCTFRLLRV 175

Query: 24  KELPPWA 4
           + LPPWA
Sbjct: 176 QGLPPWA 182


>ref|XP_003522514.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like isoform 1 [Glycine
           max]
          Length = 610

 Score =  202 bits (513), Expect = 4e-50
 Identities = 110/178 (61%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
 Frame = -2

Query: 528 QVGYLVPLNQNLEEAASASKLAVSDGTNVIGRNNLAVSDKRLSRKHLTITASTDGTANLH 349
           QVGYLVPLN+N +E AS  K AVSDG NVIGRNN+ V DKRLSRKHLT+TAS +G+A+L 
Sbjct: 6   QVGYLVPLNRNFKEEASVPKFAVSDGINVIGRNNIPVPDKRLSRKHLTLTASPNGSASLL 65

Query: 348 VEGTNPVVVNSGNKRRKLNSKETATISDGDIIELIPGHHVFKYQVLLRGGEKGSSSGVHN 169
           VEGTNP+VVNSGNKRRKLN KE ATI +GDIIELIPGHH+FKYQVL              
Sbjct: 66  VEGTNPIVVNSGNKRRKLNPKEEATICNGDIIELIPGHHLFKYQVL-------------- 111

Query: 168 EAHDGIETLSVKRGRNAVAQKAG---HCEEAIRDFHVADDQMPCTFRLLRVKELPPWA 4
                        GRNA A+K+    +  EAIR+FHV  DQ+P TFRLL V+ LPPWA
Sbjct: 112 ------------GGRNADARKSSGEDNSVEAIRNFHVPSDQIPSTFRLLHVQGLPPWA 157


>ref|XP_003522515.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like isoform 2 [Glycine
           max]
          Length = 599

 Score =  194 bits (492), Expect = 1e-47
 Identities = 106/175 (60%), Positives = 119/175 (68%)
 Frame = -2

Query: 528 QVGYLVPLNQNLEEAASASKLAVSDGTNVIGRNNLAVSDKRLSRKHLTITASTDGTANLH 349
           QVGYLVPLN+N +E AS  K AVSDG NVIGRNN+ V DKRLSRKHLT+TAS +G+A+L 
Sbjct: 6   QVGYLVPLNRNFKEEASVPKFAVSDGINVIGRNNIPVPDKRLSRKHLTLTASPNGSASLL 65

Query: 348 VEGTNPVVVNSGNKRRKLNSKETATISDGDIIELIPGHHVFKYQVLLRGGEKGSSSGVHN 169
           VEGTNP+VVNSGNKRRKLN KE ATI +GDIIELIPGHH+FKYQ          SSG  N
Sbjct: 66  VEGTNPIVVNSGNKRRKLNPKEEATICNGDIIELIPGHHLFKYQ----------SSGEDN 115

Query: 168 EAHDGIETLSVKRGRNAVAQKAGHCEEAIRDFHVADDQMPCTFRLLRVKELPPWA 4
                                     EAIR+FHV  DQ+P TFRLL V+ LPPWA
Sbjct: 116 SV------------------------EAIRNFHVPSDQIPSTFRLLHVQGLPPWA 146


>ref|XP_004155668.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Cucumis sativus]
          Length = 959

 Score =  177 bits (449), Expect = 1e-42
 Identities = 97/200 (48%), Positives = 125/200 (62%), Gaps = 14/200 (7%)
 Frame = -2

Query: 561 SELRGMSSSHSQVGYLVPLNQNLEEAASASKLAVSDGTNVIGRNNLAVSDKRLSRKHLTI 382
           S L  + S   +VGYLVPL++NLE   S  K+ +S+G N IGR+N+ VS+KR+SRKH+T+
Sbjct: 307 SNLFSVFSCGKKVGYLVPLDKNLEVDNSGLKIRLSEGPNSIGRSNVLVSEKRISRKHITL 366

Query: 381 TASTDGTANLHVEGTNPVVVNSGNKRRKLNSKETATISDGDIIELIPGHHVFKYQVLLRG 202
           T STDG+A L V+GTNPVV+NSG+ R+KL  +E+  I DGD+IELIPGH+ FKY      
Sbjct: 367 TTSTDGSAKLLVDGTNPVVINSGDGRKKLGPRESVIIRDGDVIELIPGHYPFKYASHCFN 426

Query: 201 GEKGS----SSGVHNEAHDGIETLSVKRGR----------NAVAQKAGHCEEAIRDFHVA 64
              GS       V   AHD I     KR             +   K  +  EAIR+FH+ 
Sbjct: 427 SRPGSEDLGQKRVRQVAHDKISERVAKRAEMGSPLENMQSGSSKSKEANSVEAIRNFHIP 486

Query: 63  DDQMPCTFRLLRVKELPPWA 4
           DD++P TFRLL VK LPPWA
Sbjct: 487 DDRLPMTFRLLSVKGLPPWA 506


>ref|XP_004134969.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Cucumis sativus]
          Length = 613

 Score =  174 bits (440), Expect = 1e-41
 Identities = 94/175 (53%), Positives = 121/175 (69%)
 Frame = -2

Query: 528 QVGYLVPLNQNLEEAASASKLAVSDGTNVIGRNNLAVSDKRLSRKHLTITASTDGTANLH 349
           QVGYLVPL++NLE   S  K+ +S+G N IGR+N+ VS+KR+SRKH+T+T STDG+A L 
Sbjct: 5   QVGYLVPLDKNLEVDNSGLKIRLSEGPNSIGRSNVLVSEKRISRKHITLTTSTDGSAKLL 64

Query: 348 VEGTNPVVVNSGNKRRKLNSKETATISDGDIIELIPGHHVFKYQVLLRGGEKGSSSGVHN 169
           VEGTNPVV+NSG+ R+KL  +E+  I DGD+IELIPGH+ FKY           +S   N
Sbjct: 65  VEGTNPVVINSGDGRKKLGPRESVIIRDGDVIELIPGHYPFKY-----------ASHCFN 113

Query: 168 EAHDGIETLSVKRGRNAVAQKAGHCEEAIRDFHVADDQMPCTFRLLRVKELPPWA 4
            +  G E L  KR R     +  +  EAIR+FH+ DD++P TFRLL VK LPPWA
Sbjct: 114 -SRPGSEDLGQKRVR-----QEANSVEAIRNFHIPDDRLPMTFRLLSVKGLPPWA 162


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