BLASTX nr result

ID: Glycyrrhiza24_contig00025038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025038
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610956.1| Zinc finger CCCH domain-containing protein [...   279   2e-73
ref|XP_003517520.1| PREDICTED: zinc finger CCCH domain-containin...   254   6e-66
ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   244   1e-62
ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containin...   244   1e-62
ref|XP_003538670.1| PREDICTED: zinc finger CCCH domain-containin...   228   6e-58

>ref|XP_003610956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355512291|gb|AES93914.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 685

 Score =  279 bits (714), Expect = 2e-73
 Identities = 150/210 (71%), Positives = 168/210 (80%), Gaps = 9/210 (4%)
 Frame = -2

Query: 604 VDPRLELGIGAQNWHSGNNGDTH-LHRRSYSASDAXXXXXXXXXGIGYKPCLYFAKGFCK 428
           VDPRLE+G+G QNW SGNNGD H +H+RS+SA+DA         G G+KPCLYFA+GFCK
Sbjct: 190 VDPRLEMGVGGQNWISGNNGDAHNIHKRSFSANDASFSVEESGLGFGFKPCLYFARGFCK 249

Query: 427 NGSNCKFSH-DSID---GGGVGSPGKFEGLEQREEFMRFKAAQ-HQRFM--QMVGGGASS 269
           NGSNCKF H DSID   G  VGSP KFEGLEQ EEFMRFKAAQ HQR +    +  G +S
Sbjct: 250 NGSNCKFVHGDSIDANSGAVVGSP-KFEGLEQHEEFMRFKAAQQHQRMVAASQLAAGGTS 308

Query: 268 PSSYDKYIDFLMQQHNDSQRA-AAAAFMMGDEFYNFGRGGRLERNEFLAMISGEKPNNSA 92
           P SYDKYID LMQQH+D+QRA AAAAF MG+E++N    GR ERNEFLAM+SG+KPN SA
Sbjct: 309 PVSYDKYIDLLMQQHSDNQRAVAAAAFAMGEEYFNITGRGRPERNEFLAMVSGDKPN-SA 367

Query: 91  SRQIYLTFPAESTFKDEDVSEYFSKFGPVQ 2
           SRQIYLTFPAESTFKDEDVSEYFSKFGPVQ
Sbjct: 368 SRQIYLTFPAESTFKDEDVSEYFSKFGPVQ 397


>ref|XP_003517520.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
           [Glycine max]
          Length = 646

 Score =  254 bits (650), Expect = 6e-66
 Identities = 145/207 (70%), Positives = 159/207 (76%), Gaps = 6/207 (2%)
 Frame = -2

Query: 604 VDPRLELGIGAQNWHSGNNGDTHLHRRSYSASDAXXXXXXXXXGIGYKPCLYFAKGFCKN 425
           VDPRLELG+GAQNWHSG   D+HLHRRSYSASD          G+GYKPCLYFA+GFCKN
Sbjct: 174 VDPRLELGVGAQNWHSG---DSHLHRRSYSASDVGFGCDEAAPGLGYKPCLYFARGFCKN 230

Query: 424 GSNCKFSH----DSIDGGGVGSPGKFEGLEQREEFMRFKAAQHQRFMQMVGGGASSPS-- 263
           G+NCKF H    DS+D   VGSP K EG+EQREEF+RFKA Q QR        AS PS  
Sbjct: 231 GTNCKFLHGAFTDSLD-AIVGSPSKLEGMEQREEFVRFKAPQLQRI-------ASGPSAA 282

Query: 262 SYDKYIDFLMQQHNDSQRAAAAAFMMGDEFYNFGRGGRLERNEFLAMISGEKPNNSASRQ 83
           + +KY +FLMQ   +SQR AAAAFMMG+EFYNFG   R ERN+FLA ISGEKP NSASRQ
Sbjct: 283 AREKYYEFLMQ---ESQR-AAAAFMMGEEFYNFG-WDRPERNDFLAAISGEKP-NSASRQ 336

Query: 82  IYLTFPAESTFKDEDVSEYFSKFGPVQ 2
           IYLTFPAESTFKDEDVSEYFSKFGPVQ
Sbjct: 337 IYLTFPAESTFKDEDVSEYFSKFGPVQ 363


>ref|XP_004154645.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 46-like [Cucumis sativus]
          Length = 675

 Score =  244 bits (622), Expect = 1e-62
 Identities = 134/212 (63%), Positives = 157/212 (74%), Gaps = 11/212 (5%)
 Frame = -2

Query: 604 VDPRLELGIGAQNW-HSGNNGDTHLHRRSYSASDAXXXXXXXXXGIGYKPCLYFAKGFCK 428
           VDPR+ELG G QNW  S +N DT  HRRSYSASD          G+GYKPCLYFA+GFCK
Sbjct: 187 VDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGGFGVGYKPCLYFARGFCK 246

Query: 427 NGSNCKFSH----DSIDGGG--VGSPGKFEGL-EQREEFMRFKAAQHQRF---MQMVGGG 278
           NGSNCKF H    DS+D     VGSP K EGL +QREEFMR+KAAQ QR     +++ G 
Sbjct: 247 NGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFDQREEFMRYKAAQQQRLATASELMAG- 305

Query: 277 ASSPSSYDKYIDFLMQQHNDSQRAAAAAFMMGDEFYNFGRGGRLERNEFLAMISGEKPNN 98
             SPS Y+KYI+FL+QQ N++ RA AAA MMGDE++ FG   R ERN+FLA+ + ++  N
Sbjct: 306 -VSPSQYNKYINFLLQQQNENHRATAAALMMGDEYHKFGM-SRSERNDFLALAAEKR--N 361

Query: 97  SASRQIYLTFPAESTFKDEDVSEYFSKFGPVQ 2
           SASRQIYLTFPA+STFKDEDVSEYFSKFGPVQ
Sbjct: 362 SASRQIYLTFPADSTFKDEDVSEYFSKFGPVQ 393


>ref|XP_004139047.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
           [Cucumis sativus]
          Length = 675

 Score =  244 bits (622), Expect = 1e-62
 Identities = 134/212 (63%), Positives = 157/212 (74%), Gaps = 11/212 (5%)
 Frame = -2

Query: 604 VDPRLELGIGAQNW-HSGNNGDTHLHRRSYSASDAXXXXXXXXXGIGYKPCLYFAKGFCK 428
           VDPR+ELG G QNW  S +N DT  HRRSYSASD          G+GYKPCLYFA+GFCK
Sbjct: 187 VDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGGFGVGYKPCLYFARGFCK 246

Query: 427 NGSNCKFSH----DSIDGGG--VGSPGKFEGL-EQREEFMRFKAAQHQRF---MQMVGGG 278
           NGSNCKF H    DS+D     VGSP K EGL +QREEFMR+KAAQ QR     +++ G 
Sbjct: 247 NGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFDQREEFMRYKAAQQQRLATASELMAG- 305

Query: 277 ASSPSSYDKYIDFLMQQHNDSQRAAAAAFMMGDEFYNFGRGGRLERNEFLAMISGEKPNN 98
             SPS Y+KYI+FL+QQ N++ RA AAA MMGDE++ FG   R ERN+FLA+ + ++  N
Sbjct: 306 -VSPSQYNKYINFLLQQQNENHRATAAALMMGDEYHKFGM-SRSERNDFLALAAEKR--N 361

Query: 97  SASRQIYLTFPAESTFKDEDVSEYFSKFGPVQ 2
           SASRQIYLTFPA+STFKDEDVSEYFSKFGPVQ
Sbjct: 362 SASRQIYLTFPADSTFKDEDVSEYFSKFGPVQ 393


>ref|XP_003538670.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
           [Glycine max]
          Length = 658

 Score =  228 bits (581), Expect = 6e-58
 Identities = 132/210 (62%), Positives = 155/210 (73%), Gaps = 9/210 (4%)
 Frame = -2

Query: 604 VDPRLELGIGAQNWHSGNNGDTHL-HRRSYSASDAXXXXXXXXXG---IGYKPCLYFAKG 437
           VDPRLE G+GAQNWHSG   D+HL HRRSYSASD              +GYKPCLYFA+G
Sbjct: 180 VDPRLEFGVGAQNWHSG---DSHLQHRRSYSASDVGFGCDEAAAAAPGLGYKPCLYFARG 236

Query: 436 FCKNGSNCKFSH----DSIDGGGVGSPGK-FEGLEQREEFMRFKAAQHQRFMQMVGGGAS 272
           FCKNG+NCKF H    DS+D   VGSP K  EG+EQREEF+RF  A     +Q +  G S
Sbjct: 237 FCKNGTNCKFLHGAFTDSLDAI-VGSPSKQLEGMEQREEFVRFNKAPQ---LQRIASGPS 292

Query: 271 SPSSYDKYIDFLMQQHNDSQRAAAAAFMMGDEFYNFGRGGRLERNEFLAMISGEKPNNSA 92
           + ++ +KY +FL+Q+   SQR AAAAF+MG+EFYNFG   + ERN+FLA IS EK +NSA
Sbjct: 293 A-AAREKYFEFLIQE---SQRLAAAAFIMGEEFYNFG-WDKPERNDFLAAISSEK-SNSA 346

Query: 91  SRQIYLTFPAESTFKDEDVSEYFSKFGPVQ 2
           S+QIYLTFPAESTFKDEDVSEYFSKFGPVQ
Sbjct: 347 SQQIYLTFPAESTFKDEDVSEYFSKFGPVQ 376


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