BLASTX nr result

ID: Glycyrrhiza24_contig00025029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025029
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612850.1| ABC transporter B family member [Medicago tr...   252   3e-65
ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2...   249   2e-64
ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2...   247   6e-64
ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2...   234   4e-60
gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]          228   3e-58

>ref|XP_003612850.1| ABC transporter B family member [Medicago truncatula]
            gi|355514185|gb|AES95808.1| ABC transporter B family
            member [Medicago truncatula]
          Length = 1234

 Score =  252 bits (643), Expect = 3e-65
 Identities = 130/136 (95%), Positives = 133/136 (97%)
 Frame = -3

Query: 409  VFEVMDRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALV 230
            VFEVMDRKS I GDAGEELKTVEGTIELKRI+FSYPSRPDVIIFKDF+LRVPSGKSVALV
Sbjct: 964  VFEVMDRKSEIKGDAGEELKTVEGTIELKRINFSYPSRPDVIIFKDFSLRVPSGKSVALV 1023

Query: 229  GQSGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYE 50
            GQSGSGKSSVISLILRFYDP SGKVLIDGKDITR+NLKSLRKHIGLVQQEPALFATSIYE
Sbjct: 1024 GQSGSGKSSVISLILRFYDPTSGKVLIDGKDITRINLKSLRKHIGLVQQEPALFATSIYE 1083

Query: 49   NILYGKEGASDSEVIE 2
            NILYGKEGASDSEVIE
Sbjct: 1084 NILYGKEGASDSEVIE 1099



 Score =  148 bits (373), Expect = 5e-34
 Identities = 78/136 (57%), Positives = 102/136 (75%), Gaps = 2/136 (1%)
 Frame = -3

Query: 409 VFEVMDRK--SGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVA 236
           +FE+++R   S  +   G +L  ++G I+   + FSYPSRPDV IF + NL +P+GK VA
Sbjct: 329 IFEMIERDTVSKKSSKTGRKLSKLDGHIQFNDVCFSYPSRPDVGIFTNLNLDIPAGKIVA 388

Query: 235 LVGQSGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSI 56
           LVG SGSGKS+V+SLI RFY+PISG++L+D  DI  L+LK LR+ IGLV QEPALFATSI
Sbjct: 389 LVGGSGSGKSTVVSLIERFYEPISGQILLDKNDIRELDLKWLRQQIGLVNQEPALFATSI 448

Query: 55  YENILYGKEGASDSEV 8
            ENILYGK+ A+  E+
Sbjct: 449 KENILYGKDDATLEEL 464


>ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1245

 Score =  249 bits (635), Expect = 2e-64
 Identities = 127/136 (93%), Positives = 133/136 (97%)
 Frame = -3

Query: 409  VFEVMDRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALV 230
            VFEVMDRKSGI+ D GEELKTV+GTIELKRI+FSYPSRPDVIIFKDFNLRVP+GKSVALV
Sbjct: 977  VFEVMDRKSGISCDVGEELKTVDGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSVALV 1036

Query: 229  GQSGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYE 50
            GQSGSGKSSVISLILRFYDP SG+VLIDGKDITRLNLKSLR+HIGLVQQEPALFATSIYE
Sbjct: 1037 GQSGSGKSSVISLILRFYDPTSGRVLIDGKDITRLNLKSLRRHIGLVQQEPALFATSIYE 1096

Query: 49   NILYGKEGASDSEVIE 2
            NILYGKEGASDSEVIE
Sbjct: 1097 NILYGKEGASDSEVIE 1112



 Score =  151 bits (382), Expect = 5e-35
 Identities = 80/136 (58%), Positives = 103/136 (75%), Gaps = 2/136 (1%)
 Frame = -3

Query: 409 VFEVMDRK--SGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVA 236
           +FE+++R+  S  +   G +L  +EG I+ K + FSYPSRPDV IF +  L +PSGK +A
Sbjct: 339 IFEMIERETVSKSSSKTGRKLGKLEGHIQFKNVCFSYPSRPDVAIFNNLCLDIPSGKIIA 398

Query: 235 LVGQSGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSI 56
           LVG SGSGKS+VISLI RFY+PISG++L+D  DI  L+LK LR+ IGLV QEPALFATSI
Sbjct: 399 LVGGSGSGKSTVISLIERFYEPISGQILLDRNDIRELDLKWLRQQIGLVNQEPALFATSI 458

Query: 55  YENILYGKEGASDSEV 8
            ENILYGK+ A+  E+
Sbjct: 459 KENILYGKDDATLEEL 474


>ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1246

 Score =  247 bits (631), Expect = 6e-64
 Identities = 126/136 (92%), Positives = 133/136 (97%)
 Frame = -3

Query: 409  VFEVMDRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALV 230
            VFEVMDRKSGI+ + GEELKTV+GTIELKRI+FSYPSRPDVIIFKDFNLRVP+GKSVALV
Sbjct: 977  VFEVMDRKSGISCEVGEELKTVDGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSVALV 1036

Query: 229  GQSGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYE 50
            GQSGSGKSSVISLILRFYDP SG+VLIDGKDITRLNLKSLR+HIGLVQQEPALFATSIYE
Sbjct: 1037 GQSGSGKSSVISLILRFYDPTSGRVLIDGKDITRLNLKSLRRHIGLVQQEPALFATSIYE 1096

Query: 49   NILYGKEGASDSEVIE 2
            NILYGKEGASDSEVIE
Sbjct: 1097 NILYGKEGASDSEVIE 1112



 Score =  150 bits (380), Expect = 8e-35
 Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 2/136 (1%)
 Frame = -3

Query: 409 VFEVMDRK--SGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVA 236
           +FE+++R   S  +   G +L  +EG I+ K I FSYPSRPDV IF +  L +PSGK VA
Sbjct: 339 IFEMIERDTVSKSSSKTGRKLGKLEGHIQFKNICFSYPSRPDVAIFNNLCLDIPSGKIVA 398

Query: 235 LVGQSGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSI 56
           LVG SGSGKS+VISLI RFY+P+SG++L+D  DI  L+LK LR+ IGLV QEPALFATSI
Sbjct: 399 LVGGSGSGKSTVISLIERFYEPLSGQILLDRNDIRELDLKWLRQQIGLVNQEPALFATSI 458

Query: 55  YENILYGKEGASDSEV 8
            ENILYGK+ A+  E+
Sbjct: 459 KENILYGKDDATLEEL 474


>ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1247

 Score =  234 bits (598), Expect = 4e-60
 Identities = 116/136 (85%), Positives = 127/136 (93%)
 Frame = -3

Query: 409  VFEVMDRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALV 230
            +FEVMDRK+GI GD GEELKTVEGTIELKRIHF YPSRPDV+IF DFNL+V +GK++ALV
Sbjct: 974  IFEVMDRKTGILGDVGEELKTVEGTIELKRIHFCYPSRPDVVIFNDFNLKVLAGKNIALV 1033

Query: 229  GQSGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYE 50
            G SG GKSSVISLILRFYDP SGKV+IDGKDI +LNLKSLRKHIGLVQQEPALFATSIYE
Sbjct: 1034 GHSGCGKSSVISLILRFYDPTSGKVMIDGKDIKKLNLKSLRKHIGLVQQEPALFATSIYE 1093

Query: 49   NILYGKEGASDSEVIE 2
            NILYGKEGAS++EVIE
Sbjct: 1094 NILYGKEGASEAEVIE 1109



 Score =  156 bits (395), Expect = 1e-36
 Identities = 80/136 (58%), Positives = 107/136 (78%), Gaps = 2/136 (1%)
 Frame = -3

Query: 409 VFEVMDRK--SGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVA 236
           +FE+++R   S  + + G++L  +EG I+ K + FSYPSRPDV+IF +F + +PSGK +A
Sbjct: 334 IFEMIERDTMSKASSENGKKLSKLEGHIQFKDVCFSYPSRPDVVIFNNFCIEIPSGKILA 393

Query: 235 LVGQSGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSI 56
           LVG SGSGKS+VISLI RFY+P+SG++L+DG +I  L+LK LR+ IGLV QEPALFATSI
Sbjct: 394 LVGGSGSGKSTVISLIERFYEPLSGQILLDGNNIRELDLKWLRQQIGLVNQEPALFATSI 453

Query: 55  YENILYGKEGASDSEV 8
            ENILYGK+ A+  EV
Sbjct: 454 RENILYGKDDATLEEV 469


>gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]
          Length = 1249

 Score =  228 bits (582), Expect = 3e-58
 Identities = 111/136 (81%), Positives = 127/136 (93%)
 Frame = -3

Query: 409  VFEVMDRKSGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALV 230
            VFE+MDRK+ + GDAGEEL  VEGTIELK +HFSYPSRPDV+IFKDF+L+V SGKS+ALV
Sbjct: 979  VFEIMDRKTQVVGDAGEELTNVEGTIELKGVHFSYPSRPDVVIFKDFDLKVRSGKSMALV 1038

Query: 229  GQSGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYE 50
            GQSGSGKSSV++LILRFYDP SGKV+IDG+D+ +L LKSLRKHIGLVQQEPALFATSIYE
Sbjct: 1039 GQSGSGKSSVLALILRFYDPTSGKVMIDGRDVKKLKLKSLRKHIGLVQQEPALFATSIYE 1098

Query: 49   NILYGKEGASDSEVIE 2
            NILYGKEGAS+SEV+E
Sbjct: 1099 NILYGKEGASESEVVE 1114



 Score =  158 bits (400), Expect = 4e-37
 Identities = 81/136 (59%), Positives = 105/136 (77%), Gaps = 2/136 (1%)
 Frame = -3

Query: 409 VFEVMDRK--SGITGDAGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVA 236
           +FE+++R   S  +   G +L  VEG IELK + FSYPSRPDV+IF  F L +P+GK VA
Sbjct: 342 IFEMIERNTVSKTSSKTGRKLSKVEGNIELKNVSFSYPSRPDVVIFDRFCLNIPTGKIVA 401

Query: 235 LVGQSGSGKSSVISLILRFYDPISGKVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSI 56
           LVG SGSGKS+VISLI RFY+P++G++L+DG +I  L+LK LR+ IGLV QEPALFAT+I
Sbjct: 402 LVGGSGSGKSTVISLIERFYEPLAGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTI 461

Query: 55  YENILYGKEGASDSEV 8
            ENILYGK+ A+  E+
Sbjct: 462 RENILYGKDDATVDEI 477


Top