BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025022
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603793.1| DNA topoisomerase I [Medicago truncatula] gi...    90   2e-16
ref|XP_003603800.1| DNA topoisomerase I [Medicago truncatula] gi...    86   4e-15
ref|XP_003603785.1| DNA topoisomerase I [Medicago truncatula] gi...    80   2e-13
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]              74   2e-11
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]                   73   2e-11

>ref|XP_003603793.1| DNA topoisomerase I [Medicago truncatula]
           gi|355492841|gb|AES74044.1| DNA topoisomerase I
           [Medicago truncatula]
          Length = 1009

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 50/85 (58%), Positives = 60/85 (70%)
 Frame = -3

Query: 255 MAVEASDKLNMSHEFDDDDGPVVFKRRTAPKSNQLHSDVRKSTSHSHGGQSYRKTSDVHS 76
           MAVEASD            GPV FK  +A KSNQL+S++RKSTSHSH  +SY+ TSDV S
Sbjct: 1   MAVEASD------------GPVTFKSSSASKSNQLYSEMRKSTSHSHDERSYKNTSDVSS 48

Query: 75  SNGQSSSLQKCKIVPSAKPSSMGSS 1
           SNGQ+SS Q  K+VPSAK S++ SS
Sbjct: 49  SNGQTSSSQNGKVVPSAKASAVESS 73


>ref|XP_003603800.1| DNA topoisomerase I [Medicago truncatula]
           gi|355492848|gb|AES74051.1| DNA topoisomerase I
           [Medicago truncatula]
          Length = 921

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/85 (57%), Positives = 58/85 (68%)
 Frame = -3

Query: 255 MAVEASDKLNMSHEFDDDDGPVVFKRRTAPKSNQLHSDVRKSTSHSHGGQSYRKTSDVHS 76
           MAVEASD            G V FK  +A KSNQL+S++RKSTSHSH   SY+ TSDV S
Sbjct: 1   MAVEASD------------GSVTFKSSSASKSNQLYSEMRKSTSHSHDELSYKNTSDVSS 48

Query: 75  SNGQSSSLQKCKIVPSAKPSSMGSS 1
           SNGQ+SS Q  K+VPSAK S++ SS
Sbjct: 49  SNGQTSSSQNGKVVPSAKASAVESS 73


>ref|XP_003603785.1| DNA topoisomerase I [Medicago truncatula]
           gi|355492833|gb|AES74036.1| DNA topoisomerase I
           [Medicago truncatula]
          Length = 789

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 46/85 (54%), Positives = 57/85 (67%)
 Frame = -3

Query: 255 MAVEASDKLNMSHEFDDDDGPVVFKRRTAPKSNQLHSDVRKSTSHSHGGQSYRKTSDVHS 76
           MAVEAS KLN SH+F             + +SNQLHS+ RKSTSHSH G+SY+ TS+V S
Sbjct: 1   MAVEASGKLNTSHKFI-----------RSSESNQLHSNTRKSTSHSHDGRSYKNTSNVLS 49

Query: 75  SNGQSSSLQKCKIVPSAKPSSMGSS 1
           SN QSSS Q  K++ SA  S++ SS
Sbjct: 50  SNDQSSSSQNGKVIRSAMASAVESS 74


>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
          Length = 920

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = -3

Query: 255 MAVEASDKLNMSHEFDDDDGPVVFKRRT-APKSNQLHSDVRKSTSHSHGGQSYRKTSDVH 79
           MAVEA    N+  + +DD+GPV+FKR   A K NQ +S+ +K +   H GQS   TSDV 
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 78  SSNGQSSSLQKCKIVPSAK 22
            +NG++SS QK +I PSAK
Sbjct: 61  PANGENSSAQKGRIQPSAK 79


>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
          Length = 920

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
 Frame = -3

Query: 255 MAVEASDKLNMSHEFDDDDGPVVFKRRT-APKSNQLHSDVRKSTSHSHGGQSYRKTSDVH 79
           MAVEA    N+  + +DD+GPV+FKR   A K NQ +S+ +K +   H GQS   TSDV 
Sbjct: 1   MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60

Query: 78  SSNGQSSSLQKCKIVPSAK 22
            +NG+SSS QK +I PSA+
Sbjct: 61  PANGESSSAQKGRIQPSAE 79