BLASTX nr result

ID: Glycyrrhiza24_contig00025021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025021
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555366.1| PREDICTED: transcription factor TCP19-like [...   197   3e-48
ref|XP_003535632.1| PREDICTED: transcription factor TCP19-like [...   194   3e-47
ref|XP_003592339.1| TCP family transcription factor [Medicago tr...   190   3e-46
ref|XP_004150306.1| PREDICTED: transcription factor TCP19-like [...   162   1e-37
ref|XP_002510862.1| conserved hypothetical protein [Ricinus comm...   158   2e-36

>ref|XP_003555366.1| PREDICTED: transcription factor TCP19-like [Glycine max]
          Length = 326

 Score =  197 bits (501), Expect = 3e-48
 Identities = 112/156 (71%), Positives = 121/156 (77%), Gaps = 6/156 (3%)
 Frame = +1

Query: 1   GETIRWLLEHAEPGIIEATGTGTVPAIAVSVGGTLKIPTSSAARPDGE-ETPRKRRRRAS 177
           GETIRWLLEHAEP IIEATGTGT+PAIAVSVGGTLKIPTSSAARP+GE +TP+KRRRRAS
Sbjct: 103 GETIRWLLEHAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSAARPEGEVDTPKKRRRRAS 162

Query: 178 NSEFIDVND-QVSAYSGLAPIAQTAY--XXXXXLVPLWPVASSNGTGPFFMFPXXXXXXX 348
           NSEFIDVN+ QVS  SGLAPIAQ+AY       LVPLW   ++  +GPFFMFP       
Sbjct: 163 NSEFIDVNENQVSVSSGLAPIAQSAYGSGVGGGLVPLWH-GNAAASGPFFMFP------- 214

Query: 349 XXXXXXXQPQQYWAIPATAAPFFN--ARPISGFVSA 450
                   P QYWAIPATAAPFFN  ARPISGFVSA
Sbjct: 215 ----NASNPPQYWAIPATAAPFFNVQARPISGFVSA 246


>ref|XP_003535632.1| PREDICTED: transcription factor TCP19-like [Glycine max]
          Length = 311

 Score =  194 bits (492), Expect = 3e-47
 Identities = 128/250 (51%), Positives = 142/250 (56%), Gaps = 6/250 (2%)
 Frame = +1

Query: 1   GETIRWLLEHAEPGIIEATGTGTVPAIAVSVGGTLKIPTSSAARPDGEE-TPRKRRRRAS 177
           GETIRWLLEHAEP IIEATGTGT+PAIAVSVGGTLKIPTSS AR  GEE TP+KRRRRA 
Sbjct: 105 GETIRWLLEHAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSEARAQGEEDTPKKRRRRAL 164

Query: 178 NSEFIDVND-QVSAYSGLAPIAQ-TAY-XXXXXLVPLWPVASSNGTGPFFMFPXXXXXXX 348
            SEFI++N+ QVS  SGLAPIAQ +AY      LVPLW   +    GPFF+FP       
Sbjct: 165 KSEFINLNENQVSVSSGLAPIAQSSAYGSGGGGLVPLWH-GNGAAAGPFFVFP------- 216

Query: 349 XXXXXXXQPQQYWAIPATAAPFFN--ARPISGFVSAXXXXXXXXXXPVVEHXXXXXXXXX 522
                   P QYWAIPATAAPFFN  ARPISGFVSA           ++           
Sbjct: 217 ----NASNPPQYWAIPATAAPFFNVQARPISGFVSALQMQHDNHHHSLINAAASGSVKSS 272

Query: 523 XXXXXXXXXXNXXXXXXXXXXXXXXXXXXXXXXXXXXQMLRDFSLEIYDKKELQFLGRSA 702
                     +                          QML+DFS EIYDKKELQFLG   
Sbjct: 273 STVSVTSSAAS-------------------------TQMLKDFSFEIYDKKELQFLG--- 304

Query: 703 ANSEPPAPTS 732
              +PP P+S
Sbjct: 305 ---QPPQPSS 311


>ref|XP_003592339.1| TCP family transcription factor [Medicago truncatula]
           gi|355481387|gb|AES62590.1| TCP family transcription
           factor [Medicago truncatula]
          Length = 367

 Score =  190 bits (483), Expect = 3e-46
 Identities = 113/168 (67%), Positives = 117/168 (69%), Gaps = 18/168 (10%)
 Frame = +1

Query: 1   GETIRWLLEHAEPGIIEATGTGTVPAIAVSVGGTLKIPTSSAARPDGEETPRKRRRRASN 180
           GETIRWLLE AEP IIEATGTGTVPAIAVSVGGTLKIPTSS ARPDGE+ P KRRRRASN
Sbjct: 131 GETIRWLLEQAEPSIIEATGTGTVPAIAVSVGGTLKIPTSSPARPDGEDAPVKRRRRASN 190

Query: 181 SEFIDVNDQVSAYSGLAPIAQTAY------------XXXXXLVPLWPVAS----SNGTGP 312
           SEF+D+NDQVS  SGLAPIAQTAY                 LVPLWPV S    SN TGP
Sbjct: 191 SEFVDLNDQVSMCSGLAPIAQTAYGAAATSSGGGSGENGGGLVPLWPVVSNGVGSNTTGP 250

Query: 313 FFMFPXXXXXXXXXXXXXXQPQQYWAIPATAAPFFN--ARPISGFVSA 450
           FFMFP              QP Q+WAIP  AAPFFN   RPIS FVSA
Sbjct: 251 FFMFP--------NSTLMNQP-QFWAIP--AAPFFNVQTRPISDFVSA 287


>ref|XP_004150306.1| PREDICTED: transcription factor TCP19-like [Cucumis sativus]
           gi|449527499|ref|XP_004170748.1| PREDICTED:
           transcription factor TCP19-like [Cucumis sativus]
          Length = 342

 Score =  162 bits (410), Expect = 1e-37
 Identities = 116/250 (46%), Positives = 131/250 (52%), Gaps = 4/250 (1%)
 Frame = +1

Query: 1   GETIRWLLEHAEPGIIEATGTGTVPAIAVSVGGTLKIPTSSAARPDGE--ETPRKRRRRA 174
           GETIRWLLEHAEP IIEATGTGTVPAIAVSVGGTLKIPT+S ARP+GE  E PRKRRR+ 
Sbjct: 123 GETIRWLLEHAEPAIIEATGTGTVPAIAVSVGGTLKIPTTSPARPNGEISEAPRKRRRKG 182

Query: 175 SNSEFIDVNDQVSAYSGLAPIAQTAYXXXXXLVPLWPVASSNG-TGPFFMFPXXXXXXXX 351
           +NSE  D NDQ S  SGL PIA  A      LVP W   S+ G T PFFM P        
Sbjct: 183 TNSESNDCNDQASVSSGLTPIAPMA-AYGAGLVPFW--GSAGGVTEPFFMVP-------- 231

Query: 352 XXXXXXQPQQYWAIPATAAPFFNARPISGFVSAXXXXXXXXXXPVVEHXXXXXXXXXXXX 531
                 QP Q WA+P        ARP+S  VS+          P ++             
Sbjct: 232 GTSNNHQP-QLWAVP--------ARPLSNLVSS--------MNPGLQFGGVVPVLTRAVS 274

Query: 532 XXXXXXXNXXXXXXXXXXXXXXXXXXXXXXXXXXQMLRDFSLEIYDKKELQFLG-RSAAN 708
                  +                          QMLRDFSLEIY+KKEL+F+G RS A 
Sbjct: 275 NGSSGLESGSSPAMVSASLIPGTVSAPASTSGSTQMLRDFSLEIYEKKELEFMGRRSPAK 334

Query: 709 SEPPAPTSKP 738
           S+   P SKP
Sbjct: 335 SQ--TPCSKP 342


>ref|XP_002510862.1| conserved hypothetical protein [Ricinus communis]
           gi|223549977|gb|EEF51464.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 385

 Score =  158 bits (399), Expect = 2e-36
 Identities = 96/170 (56%), Positives = 105/170 (61%), Gaps = 20/170 (11%)
 Frame = +1

Query: 1   GETIRWLLEHAEPGIIEATGTGTVPAIAVSVGGTLKIPTSSAARPDGEET-PRKRRRRAS 177
           GETIRWLLEHAEP IIEATGTGTVPAIAVS+ GTLKIPT+S ARPDG+ET PRKRR+R S
Sbjct: 129 GETIRWLLEHAEPAIIEATGTGTVPAIAVSINGTLKIPTTSPARPDGDETLPRKRRKRPS 188

Query: 178 NSEFIDVND--------QVSAYSGLAPIAQT---------AYXXXXXLVPLWPVASSNGT 306
           NSEFIDVN+        Q S  SGLAPI+ T          +     LVP WP+      
Sbjct: 189 NSEFIDVNEHRQHQQQQQSSLSSGLAPISPTNTTATLQNNNFGSAQGLVPFWPM------ 242

Query: 307 GPFFMFPXXXXXXXXXXXXXXQPQQYWAIPATAAPFFN--ARPISGFVSA 450
           G F +                Q  Q WAIPA A PFFN  ARPIS FVSA
Sbjct: 243 GTFVLPQSAGLTGGVGVGGSNQQPQLWAIPANATPFFNVAARPISNFVSA 292


Top