BLASTX nr result

ID: Glycyrrhiza24_contig00025012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025012
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618992.1| hypothetical protein MTR_6g031160 [Medicago ...    76   3e-12
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    59   3e-07
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    59   3e-07
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...    59   4e-07
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    57   2e-06

>ref|XP_003618992.1| hypothetical protein MTR_6g031160 [Medicago truncatula]
           gi|355494007|gb|AES75210.1| hypothetical protein
           MTR_6g031160 [Medicago truncatula]
          Length = 183

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 31/89 (34%), Positives = 48/89 (53%)
 Frame = +3

Query: 18  WHALLTCPTSQQCWQVLGVWNTIENELLRHDDFGHIFFTLIRILPSDSISKFCMTLWAIW 197
           WH  L C  S  CW+ + +W+ +E  +   + FG +F  + + L  + +  F MT W+IW
Sbjct: 37  WHLFLVCADSITCWRKVNIWSLLEELMDGAESFGDVFTRMWQRLLVEQLMSFSMTSWSIW 96

Query: 198 KRRNTKHWDNKEDGVHQCIHMGTSVFNAW 284
           K+RN K W NK + + Q +     V NAW
Sbjct: 97  KKRNLKLWKNKIESLDQILQRAQVVLNAW 125


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/91 (27%), Positives = 44/91 (48%)
 Frame = +3

Query: 21  HALLTCPTSQQCWQVLGVWNTIENELLRHDDFGHIFFTLIRILPSDSISKFCMTLWAIWK 200
           H    C    Q WQ+  +W+ I+  ++  D    + F L++    +  S+  +T+W++WK
Sbjct: 221 HLFCVCTFDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLEQ-SQIFVTMWSLWK 279

Query: 201 RRNTKHWDNKEDGVHQCIHMGTSVFNAWLLA 293
           RRN K W+NK +     +     +   W LA
Sbjct: 280 RRNLKVWENKNESCAMTVDRARVMMEEWQLA 310


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/91 (27%), Positives = 44/91 (48%)
 Frame = +3

Query: 21  HALLTCPTSQQCWQVLGVWNTIENELLRHDDFGHIFFTLIRILPSDSISKFCMTLWAIWK 200
           H    C    Q WQ+  +W+ I+  ++  D    + F L++    +  S+  +T+W++WK
Sbjct: 314 HLFCVCTFDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLEQ-SQIFVTMWSLWK 372

Query: 201 RRNTKHWDNKEDGVHQCIHMGTSVFNAWLLA 293
           RRN K W+NK +     +     +   W LA
Sbjct: 373 RRNLKVWENKNESCAMTVDRARVMMEEWQLA 403


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/99 (26%), Positives = 42/99 (42%)
 Frame = +3

Query: 6   HK*IWHALLTCPTSQQCWQVLGVWNTIENELLRHDDFGHIFFTLIRILPSDSISKFCMTL 185
           H+  +H    C T+   W    VW+ I   L + D+   I F L++ L +  +      +
Sbjct: 104 HEDCYHIFFHCRTAIDVWNTANVWHLIAPSLSQFDNAPDIIFNLLQKLSASQMESIVTIM 163

Query: 186 WAIWKRRNTKHWDNKEDGVHQCIHMGTSVFNAWLLANHE 302
           W+IWK RN K W    +     +     +   W  ANH+
Sbjct: 164 WSIWKSRNLKLWQQVSESSVTILERAKHLLEGWRKANHK 202


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/88 (28%), Positives = 42/88 (47%)
 Frame = +3

Query: 21   HALLTCPTSQQCWQVLGVWNTIENELLRHDDFGHIFFTLIRILPSDSISKFCMTLWAIWK 200
            H    C  S+QCWQ LG+W+ ++ +   +  FG   F +++ L S     +   +W+IWK
Sbjct: 1470 HLFFYCTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWK 1529

Query: 201  RRNTKHWDNKEDGVHQCIHMGTSVFNAW 284
            +RN   W N+          G ++   W
Sbjct: 1530 QRNDCIWRNEVMTTAAVRDRGLNLLTGW 1557


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