BLASTX nr result

ID: Glycyrrhiza24_contig00024991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024991
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625749.1| Pre-mRNA cleavage complex 2 protein Pcf11 [M...   110   2e-22
ref|XP_002277320.2| PREDICTED: uncharacterized protein LOC100251...   102   2e-20
ref|XP_003537039.1| PREDICTED: uncharacterized protein LOC100807...   100   9e-20
emb|CBI30249.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_003520684.1| PREDICTED: uncharacterized protein LOC100788...    94   9e-18

>ref|XP_003625749.1| Pre-mRNA cleavage complex 2 protein Pcf11 [Medicago truncatula]
           gi|355500764|gb|AES81967.1| Pre-mRNA cleavage complex 2
           protein Pcf11 [Medicago truncatula]
          Length = 1039

 Score =  110 bits (274), Expect = 2e-22
 Identities = 66/108 (61%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
 Frame = +2

Query: 47  MESTRRSLDRSREPGTKKPRLIEELERGSNPTARPFPQR-QPGSGVVTTLSSAARFRANX 223
           ME++RRSLDRSREPG KKPRLI+EL++GSN T+R FPQR QP SGV T LSS  RFR N 
Sbjct: 1   MENSRRSLDRSREPGAKKPRLIDELQQGSNQTSRTFPQRQQPTSGVATMLSS-GRFRMN- 58

Query: 224 XXXXXXXXXXXXXXXXXXXXXXXELVAQYKTALAELTFNSKPIITNLT 367
                                  ELV QYK ALAELTFNSKPIITNLT
Sbjct: 59  --DRDSESSDGGGGYHPQPPPHQELVTQYKAALAELTFNSKPIITNLT 104


>ref|XP_002277320.2| PREDICTED: uncharacterized protein LOC100251089 [Vitis vinifera]
          Length = 801

 Score =  102 bits (255), Expect = 2e-20
 Identities = 61/109 (55%), Positives = 67/109 (61%)
 Frame = +2

Query: 41  MDMESTRRSLDRSREPGTKKPRLIEELERGSNPTARPFPQRQPGSGVVTTLSSAARFRAN 220
           M+MES+RRS DRSREPG KKPRL EE ERG NP  RPFPQR PG+       +A+R + N
Sbjct: 1   MEMESSRRSFDRSREPGFKKPRLAEEAERGPNPNGRPFPQR-PGAA-----PAASRLKTN 54

Query: 221 XXXXXXXXXXXXXXXXXXXXXXXXELVAQYKTALAELTFNSKPIITNLT 367
                                   ELV QYKTALAELTFNSKPIITNLT
Sbjct: 55  -----ERDVDRDDLGRGLYQQQHQELVTQYKTALAELTFNSKPIITNLT 98


>ref|XP_003537039.1| PREDICTED: uncharacterized protein LOC100807857, partial [Glycine
           max]
          Length = 351

 Score =  100 bits (250), Expect = 9e-20
 Identities = 64/113 (56%), Positives = 69/113 (61%), Gaps = 6/113 (5%)
 Frame = +2

Query: 47  MESTRRSLDRSREPGTKKPRLIEELERGSNPTARPFPQRQPGSGVVTTLSSAARFRAN-- 220
           ME++RR  DRSREPG KKPRL+EEL+R SN  AR F QRQ  SG +TTLSS ARFR N  
Sbjct: 1   MENSRRPFDRSREPGPKKPRLMEELDRASNSGARQFHQRQVASG-ITTLSS-ARFRTNDR 58

Query: 221 ----XXXXXXXXXXXXXXXXXXXXXXXXELVAQYKTALAELTFNSKPIITNLT 367
                                       ELVAQYK ALAELTFNSKPIITNLT
Sbjct: 59  DLESSDFGRRGGAGGGGGGYQPQPLPFQELVAQYKAALAELTFNSKPIITNLT 111


>emb|CBI30249.3| unnamed protein product [Vitis vinifera]
          Length = 1049

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 62/121 (51%), Positives = 69/121 (57%)
 Frame = +2

Query: 5   RIRVLDSSHLILMDMESTRRSLDRSREPGTKKPRLIEELERGSNPTARPFPQRQPGSGVV 184
           R+RVL S       +  +RRS DRSREPG KKPRL EE ERG NP  RPFPQR PG+   
Sbjct: 68  RVRVLISRVSNFHLLFDSRRSFDRSREPGFKKPRLAEEAERGPNPNGRPFPQR-PGAA-- 124

Query: 185 TTLSSAARFRANXXXXXXXXXXXXXXXXXXXXXXXXELVAQYKTALAELTFNSKPIITNL 364
               +A+R + N                        ELV QYKTALAELTFNSKPIITNL
Sbjct: 125 ---PAASRLKTN-----ERDVDRDDLGRGLYQQQHQELVTQYKTALAELTFNSKPIITNL 176

Query: 365 T 367
           T
Sbjct: 177 T 177


>ref|XP_003520684.1| PREDICTED: uncharacterized protein LOC100788958 [Glycine max]
          Length = 935

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 63/111 (56%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
 Frame = +2

Query: 41  MDMESTRRSLDRSREPGTKKPRLIEELERGSNPTARPFPQRQPGSGVVTTLSSAARFRAN 220
           M MESTRRSLDRSREPG KKPRLI+EL      +AR  PQR   +  VTTL+S  RFRAN
Sbjct: 1   MSMESTRRSLDRSREPGPKKPRLIDEL------SARQLPQR---TAAVTTLAS-TRFRAN 50

Query: 221 --XXXXXXXXXXXXXXXXXXXXXXXXELVAQYKTALAELTFNSKPIITNLT 367
                                     ELV QYKTALAELTFNSKPIITNLT
Sbjct: 51  DRDSEISDLGRGGGGGGYQPQPPPHQELVTQYKTALAELTFNSKPIITNLT 101


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