BLASTX nr result

ID: Glycyrrhiza24_contig00024979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024979
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523167.1| PREDICTED: uncharacterized protein LOC100793...   317   2e-84
ref|XP_003602760.1| hypothetical protein MTR_3g098740 [Medicago ...   289   5e-76
ref|XP_002511116.1| conserved hypothetical protein [Ricinus comm...   257   2e-66
ref|XP_002318158.1| predicted protein [Populus trichocarpa] gi|2...   247   2e-63
ref|XP_002321738.1| predicted protein [Populus trichocarpa] gi|2...   224   1e-56

>ref|XP_003523167.1| PREDICTED: uncharacterized protein LOC100793556 [Glycine max]
          Length = 665

 Score =  317 bits (812), Expect = 2e-84
 Identities = 176/257 (68%), Positives = 188/257 (73%), Gaps = 2/257 (0%)
 Frame = -2

Query: 766  LSGKVSQKIEGFLAVLNVIGGKFSPQSRKIPFAVTSVDGDKYQLYYSSINISGKLLSSKS 587
            LSGKVS KIEGFLA+LNV GG FSPQS+KIPFAVTSVDGDKY LYYSSIN+SGKLLS KS
Sbjct: 399  LSGKVSPKIEGFLALLNVTGGNFSPQSQKIPFAVTSVDGDKYLLYYSSINLSGKLLSGKS 458

Query: 586  RVAKFQRSLSMDESRSEKSRIRIPIKGRIQLVLSNPERTPIHTFFCNYDLSDMPAGTKQT 407
            RVAKFQR+LSMDESRSEK RIRIP+KGRIQLVLSNPERTPIHTFFCNYDLSDMP GTK T
Sbjct: 459  RVAKFQRTLSMDESRSEKPRIRIPMKGRIQLVLSNPERTPIHTFFCNYDLSDMPTGTK-T 517

Query: 406  FLRQKIXXXXXXXXXXTGKDIQTDSDV--DAKSSLISNTSQSTDKDLLTSKCGEMDSFAC 233
            FLRQK+           GK+ QTDSD   DAKSSLIS TS   DKDLLTSKCGE DSF C
Sbjct: 518  FLRQKVTLTASRSKSMMGKESQTDSDTRADAKSSLISVTSHR-DKDLLTSKCGEFDSFTC 576

Query: 232  TKTGKEENYSSSTCLVDEDKFLNGPSKINNNAINNGTLLYALHLRFMCPFPKKRSRSVPT 53
            +K G                                 LLYALHLRFMCP PK+RSRSV  
Sbjct: 577  SKAG--------------------------------ILLYALHLRFMCPLPKRRSRSVHK 604

Query: 52   CKSDPLSAEARNIMDNE 2
            CKS P+SA+ RNI+D E
Sbjct: 605  CKSGPVSADMRNIVDIE 621


>ref|XP_003602760.1| hypothetical protein MTR_3g098740 [Medicago truncatula]
            gi|355491808|gb|AES73011.1| hypothetical protein
            MTR_3g098740 [Medicago truncatula]
          Length = 617

 Score =  289 bits (739), Expect = 5e-76
 Identities = 162/259 (62%), Positives = 177/259 (68%), Gaps = 4/259 (1%)
 Frame = -2

Query: 766  LSGKV--SQKIEGFLAVLNVIGGKFSPQSRKIPFAVTSVDGDKYQLYYSSINISGKLLSS 593
            LSG++   +KIEGFLA+LNV GG FSPQSRK+PFAVTSVDGDKY LYYSSIN+SGKLLS 
Sbjct: 353  LSGRLPSEKKIEGFLAMLNVTGGNFSPQSRKVPFAVTSVDGDKYLLYYSSINLSGKLLSG 412

Query: 592  KSRVAKFQRSLSMDESRSEKSRIRIPIKGRIQLVLSNPERTPIHTFFCNYDLSDMPAGTK 413
            K+RV KFQR LSMDE R  K R+RIPIKG IQLVL+NPE TPIHTFFCNYDLSDMPAGTK
Sbjct: 413  KTRVTKFQRKLSMDELRYVKRRMRIPIKGCIQLVLNNPESTPIHTFFCNYDLSDMPAGTK 472

Query: 412  QTFLRQKIXXXXXXXXXXTGKDIQTDSDVDAKSSLISNTSQSTDKDLLTSKCGEMDSFAC 233
             TFLRQKI           GK+IQTDSD DAK                            
Sbjct: 473  -TFLRQKITLTSSRSMSTNGKEIQTDSDTDAK---------------------------- 503

Query: 232  TKTGKEENYSSSTCLVDE--DKFLNGPSKINNNAINNGTLLYALHLRFMCPFPKKRSRSV 59
                      S  CLVDE  D FLNG SKINNN++NN  +LYALHLRFMCP PKK SR V
Sbjct: 504  ---------FSRRCLVDEDCDTFLNGSSKINNNSLNNCIMLYALHLRFMCPLPKKHSRFV 554

Query: 58   PTCKSDPLSAEARNIMDNE 2
            PT  SDP  +EARN+M NE
Sbjct: 555  PTRNSDPPPSEARNLMHNE 573


>ref|XP_002511116.1| conserved hypothetical protein [Ricinus communis]
            gi|223550231|gb|EEF51718.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 692

 Score =  257 bits (656), Expect = 2e-66
 Identities = 143/265 (53%), Positives = 178/265 (67%), Gaps = 10/265 (3%)
 Frame = -2

Query: 766  LSGKVSQKIEGFLAVLNVIGGKFSPQSRKIPFAVTSVDGDKYQLYYSSINISGKLLSSKS 587
            LSGKVSQ+I+GFLAVLNV GG FSPQ++K+PFA TSV+GD Y LYYSSI+++G LLS++ 
Sbjct: 390  LSGKVSQRIDGFLAVLNVTGGNFSPQTKKLPFAATSVEGDNYLLYYSSIDLAGHLLSNEC 449

Query: 586  RVAKFQRSLSMDESRSEKSRIRIPIKGRIQLVLSNPERTPIHTFFCNYDLSDMPAGTKQT 407
              AK +RSLS+++S +EKSR+RIP+KGRIQLVLSNPE+TPIHTFFCNYDL+DMPAGTK T
Sbjct: 450  SGAKMRRSLSINDSHAEKSRLRIPVKGRIQLVLSNPEKTPIHTFFCNYDLNDMPAGTK-T 508

Query: 406  FLRQKIXXXXXXXXXXTGKDIQTDSDVDAKSSLISNTSQSTDKDLLTSKCGEMDS----- 242
            FLRQKI           G+    D   + K S I  +SQS      TS   E+D+     
Sbjct: 509  FLRQKI---TLSSSRLNGRSRDFDMKNNVKQSSILGSSQSLSSGKETSDSNELDAEHTIR 565

Query: 241  -----FACTKTGKEENYSSSTCLVDEDKFLNGPSKINNNAINNGTLLYALHLRFMCPFPK 77
                   CT TG +++   ++  V   K ++ PSK N N    G L YALHL F+C   K
Sbjct: 566  SLNHCKKCTSTGAKDDSPPNSSNVCVGKSVHSPSKANENTAGAGVLRYALHLHFLCSSSK 625

Query: 76   KRSRSVPTCKSDPLSAEARNIMDNE 2
            K +RSV  CKSDP SA AR+ MD E
Sbjct: 626  KCTRSVRRCKSDPSSAPARSKMDME 650


>ref|XP_002318158.1| predicted protein [Populus trichocarpa] gi|222858831|gb|EEE96378.1|
            predicted protein [Populus trichocarpa]
          Length = 700

 Score =  247 bits (630), Expect = 2e-63
 Identities = 132/268 (49%), Positives = 173/268 (64%), Gaps = 16/268 (5%)
 Frame = -2

Query: 763  SGKVSQKIEGFLAVLNVIGGKFSPQSRKIPFAVTSVDGDKYQLYYSSINISGKLLSSKSR 584
            SGKVSQ+I+GFLAVLN+ GG FSP+++K+PF VTS+DG+ Y LYY+SI+++G + ++K  
Sbjct: 390  SGKVSQRIDGFLAVLNITGGNFSPKTQKLPFTVTSMDGNNYLLYYASIDLAGNVQANKYS 449

Query: 583  VAKFQRSLSMDESRSEKSRIRIPIKGRIQLVLSNPERTPIHTFFCNYDLSDMPAGTKQTF 404
                +RSLS+D+SRSE+SR+RIP+KGR+QLVLSNPE+TPIHTFFC+YDLSDMPAGTK T 
Sbjct: 450  DQNMRRSLSIDDSRSERSRLRIPMKGRMQLVLSNPEKTPIHTFFCSYDLSDMPAGTK-TC 508

Query: 403  LRQKI--XXXXXXXXXXTGKDIQTDSDVDAKSSLISNTSQSTDKDLLTSKCGEMDSFACT 230
            LRQKI             G++  +D + DAK S + NTS S       +    +++   T
Sbjct: 509  LRQKITLSSSAPASLSVNGRNRDSDMETDAKPSAVPNTSHSLPHGRDATNSNRLETVHNT 568

Query: 229  KTGKEENYSSSTCLVD--------------EDKFLNGPSKINNNAINNGTLLYALHLRFM 92
            K      +S+S C +                 K +N PS +N N    G L YAL L+FM
Sbjct: 569  KFPDHSRFSNSECKITGVEGCSPPNTSHLCTSKSVNSPSNVNENTTRAGVLRYALQLQFM 628

Query: 91   CPFPKKRSRSVPTCKSDPLSAEARNIMD 8
            CP PKK SRS+  CKSDP S  A N MD
Sbjct: 629  CPLPKKSSRSLQRCKSDPSSVPAANKMD 656


>ref|XP_002321738.1| predicted protein [Populus trichocarpa] gi|222868734|gb|EEF05865.1|
            predicted protein [Populus trichocarpa]
          Length = 665

 Score =  224 bits (572), Expect = 1e-56
 Identities = 130/268 (48%), Positives = 166/268 (61%), Gaps = 16/268 (5%)
 Frame = -2

Query: 763  SGKVSQKIEGFLAVLNVIGGKFSPQSRKIPFAVTSVDGDKYQLYYSSINISGKLLSSKSR 584
            SGKVSQ+I+GFLAVLNV GG FSP+++K+PF VTSVDG+ Y LYYSSI++ G +  +  +
Sbjct: 357  SGKVSQRIDGFLAVLNVTGGNFSPKAQKLPFTVTSVDGNNYLLYYSSIDLGGNVQENSDQ 416

Query: 583  VAKFQRSLSMDESRSEKSRIRIPIKGRIQLVLSNPERTPIHTFFCNYDLSDMPAGTKQTF 404
              K +RSLS+D+SRS++SR+RIP+KGRIQLVLSNPE+TPIHTFFC+YDLSDMPAGTK T 
Sbjct: 417  --KMRRSLSIDDSRSDRSRLRIPMKGRIQLVLSNPEKTPIHTFFCSYDLSDMPAGTK-TC 473

Query: 403  LRQKIXXXXXXXXXXTGKDIQTDSDV--DAKSSLISNTSQSTDKDLLTSKCGEMDSFACT 230
            LRQKI                 DSD+  DAK S +  T+         +    +D+   T
Sbjct: 474  LRQKITLSSSAPASLPVNVKNRDSDMKNDAKPSSVPKTNNCLPHGRDATNSIRLDTVHNT 533

Query: 229  KTGKEENYSSSTC--------------LVDEDKFLNGPSKINNNAINNGTLLYALHLRFM 92
            ++     +S+S C               +   K ++GPSK+N N    G L YAL L+FM
Sbjct: 534  RSPDHSRFSNSECKNTGVEGCSPPNSSRLCIRKSVHGPSKVNENTTGAGALRYALQLQFM 593

Query: 91   CPFPKKRSRSVPTCKSDPLSAEARNIMD 8
             P PKK  RS     SDP S  A N MD
Sbjct: 594  SPLPKKSLRSFQRSTSDPSSVPAANKMD 621


Top