BLASTX nr result

ID: Glycyrrhiza24_contig00024975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024975
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...   316   7e-84
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...   316   7e-84
gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold ...   259   6e-67
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...   250   4e-64
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]      249   1e-63

>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score =  316 bits (809), Expect = 7e-84
 Identities = 160/295 (54%), Positives = 209/295 (70%), Gaps = 3/295 (1%)
 Frame = -3

Query: 895  YFVHPGDGPGSVAVTPVLSNNGANYHSWARSMRRALGGKNKFDFVDGTIEIP-DSFDPSF 719
            +FVHP DGP SV VTP+L  +G+NYHSWARS+RRALG K KF+F+DGTI +P D+FDPSF
Sbjct: 214  FFVHPSDGPSSVKVTPLL--DGSNYHSWARSLRRALGAKLKFEFLDGTIPMPVDAFDPSF 271

Query: 718  KAWSRCNMLIHSWIMNSVAETIGQSIVFLENAIDVWKELKERFSQGDLIRISDLQTEIYA 539
            +AW+RCNMLIHSWI+NSV  +I +SIVF++NA DVW +LKERFSQGDL+R+S++Q EIYA
Sbjct: 272  RAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFSQGDLVRVSEIQQEIYA 331

Query: 538  LKQGSLTVTEFFTELKVLWEELESYMPMPVCGCRVKCSCLTGMTAAQHYHNLSKTIKFLT 359
            L QG+ +VT F+++LK LWEELE YMP+P C C  +CSC     A +H+H L   ++FLT
Sbjct: 332  LTQGTRSVTTFYSDLKALWEELEIYMPIPNCTCHHRCSCDAMRLARRHHHTL-HVMRFLT 390

Query: 358  GLNEKFSMVKSQILLMDHLPNLNRIFSMVIQHERQYVVN--DKAKILVSNSDYKKPQXXX 185
            GLN++F+ VKSQILL++ LP++ +IFSMVIQ ERQ  V   D +K LV+ S  K      
Sbjct: 391  GLNDEFNAVKSQILLIEPLPSITKIFSMVIQFERQNCVPNLDDSKALVNASTSKS----- 445

Query: 184  XXXXXXXXXXXXXGKVCSHCGKIGHTIETCYQIHGYPPNWQKPASNLASSSTNEG 20
                          + C++C K  H +E C+Q HG PP+  K  S  A  S  +G
Sbjct: 446  -QGSANGRSNSGSKRYCTYCHKTNHFVENCFQKHGVPPHMMKNHSGSAHHSAVDG 499


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score =  316 bits (809), Expect = 7e-84
 Identities = 160/295 (54%), Positives = 209/295 (70%), Gaps = 3/295 (1%)
 Frame = -3

Query: 895 YFVHPGDGPGSVAVTPVLSNNGANYHSWARSMRRALGGKNKFDFVDGTIEIP-DSFDPSF 719
           +FVHP DGP SV VTP+L  +G+NYHSWARS+RRALG K KF+F+DGTI +P D+FDPSF
Sbjct: 21  FFVHPSDGPSSVKVTPLL--DGSNYHSWARSLRRALGAKLKFEFLDGTIPMPVDAFDPSF 78

Query: 718 KAWSRCNMLIHSWIMNSVAETIGQSIVFLENAIDVWKELKERFSQGDLIRISDLQTEIYA 539
           +AW+RCNMLIHSWI+NSV  +I +SIVF++NA DVW +LKERFSQGDL+R+S++Q EIYA
Sbjct: 79  RAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFSQGDLVRVSEIQQEIYA 138

Query: 538 LKQGSLTVTEFFTELKVLWEELESYMPMPVCGCRVKCSCLTGMTAAQHYHNLSKTIKFLT 359
           L QG+ +VT F+++LK LWEELE YMP+P C C  +CSC     A +H+H L   ++FLT
Sbjct: 139 LTQGTRSVTTFYSDLKALWEELEIYMPIPNCTCHHRCSCDAMRLARRHHHTL-HVMRFLT 197

Query: 358 GLNEKFSMVKSQILLMDHLPNLNRIFSMVIQHERQYVVN--DKAKILVSNSDYKKPQXXX 185
           GLN++F+ VKSQILL++ LP++ +IFSMVIQ ERQ  V   D +K LV+ S  K      
Sbjct: 198 GLNDEFNAVKSQILLIEPLPSITKIFSMVIQFERQNCVPNLDDSKALVNASTSKS----- 252

Query: 184 XXXXXXXXXXXXXGKVCSHCGKIGHTIETCYQIHGYPPNWQKPASNLASSSTNEG 20
                         + C++C K  H +E C+Q HG PP+  K  S  A  S  +G
Sbjct: 253 -QGSANGRSNSGSKRYCTYCHKTNHFVENCFQKHGVPPHMMKNHSGSAHHSAVDG 306


>gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 772

 Score =  259 bits (663), Expect = 6e-67
 Identities = 137/300 (45%), Positives = 191/300 (63%), Gaps = 6/300 (2%)
 Frame = -3

Query: 895 YFVHPGDGPGSVAVTPVLSNNGANYHSWARSMRRALGGKNKFDFVDGTIEIPDSFDPSFK 716
           Y+VHP +GP SV VTP+L+  G NY +W RSM+RALG KNKF F+DG++ IP   D +  
Sbjct: 19  YYVHPSEGPNSVTVTPLLT--GPNYLAWNRSMKRALGTKNKFVFIDGSVPIPPMDDLNRT 76

Query: 715 AWSRCNMLIHSWIMNSVAETIGQSIVFLENAIDVWKELKERFSQGDLIRISDLQTEIYAL 536
           AW RCN LI SWI+NSV+  I Q+IVF E AIDVW EL+ERFS+ D IR++ L++ I  L
Sbjct: 77  AWERCNNLILSWIINSVSPQIAQTIVFHEYAIDVWIELQERFSKVDRIRVASLRSSINNL 136

Query: 535 KQGSLTVTEFFTELKVLWEELESYMPMPVCGCRVKCSCLTGMTAAQHYHNLSKTIKFLTG 356
           KQG  +V ++FT +K LWEEL S+ PMP+C C   C C   M AA+ +    + I+FLTG
Sbjct: 137 KQGDKSVLDYFTSIKSLWEELNSHRPMPMCTCPYPCRC-ESMRAARDFRMEDQVIQFLTG 195

Query: 355 LNEKFSMVKSQILLMDHLPNLNRIFSMVIQHERQYV------VNDKAKILVSNSDYKKPQ 194
           LN+ FS+VK+Q+LL+D LP++N+++SMVIQ E   +       N+ + ILV+ SD +KP 
Sbjct: 196 LNDSFSVVKTQVLLIDPLPSINKVYSMVIQEESNIIPPTSLASNEDSSILVNASDARKP- 254

Query: 193 XXXXXXXXXXXXXXXXGKVCSHCGKIGHTIETCYQIHGYPPNWQKPASNLASSSTNEGYD 14
                            + C+ C +  HT+E CY  H + PN  KP ++  + ++    D
Sbjct: 255 -FLRGKSSGTSQSKNNSRYCTFCRRNNHTVEYCYLKHDF-PNANKPTASSNAVTSEHAVD 312


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score =  250 bits (639), Expect = 4e-64
 Identities = 128/304 (42%), Positives = 188/304 (61%), Gaps = 23/304 (7%)
 Frame = -3

Query: 892  FVHPGDGPGSVAVTPVLSNNGANYHSWARSMRRALGGKNKFDFVDGTIEIPDSFDPSFKA 713
            ++HP + P +  V+PVL +   NYHSW+RSM  AL  KNK +F+DG+   P   D    A
Sbjct: 361  YLHPSENPATALVSPVLDST--NYHSWSRSMVTALSAKNKVEFIDGSAPEPLKTDRMHGA 418

Query: 712  WSRCNMLIHSWIMNSVAETIGQSIVFLENAIDVWKELKERFSQGDLIRISDLQTEIYALK 533
            W RCN ++ SWI++SVA +I QSI++++ A ++W++LK R+SQGDL+RISDLQ E   +K
Sbjct: 419  WCRCNNMVVSWIVHSVATSIRQSILWMDKAEEIWRDLKSRYSQGDLLRISDLQQEASTMK 478

Query: 532  QGSLTVTEFFTELKVLWEELESYMPMPVCGCRVKCSCLTGMTAAQHYHNLSKTIKFLTGL 353
            QG+LTVTE+FT L+V+W+E+E++ P P+C C ++CSC      AQ      + ++FL GL
Sbjct: 479  QGTLTVTEYFTCLRVIWDEIENFRPDPICSCNIRCSCNAFTIIAQRKLE-DRAMQFLRGL 537

Query: 352  NEKFSMVKSQILLMDHLPNLNRIFSMVIQHERQYVVN--------------DKAKIL--- 224
            NE+++ ++S +LLMD +P +++IFS V Q ERQ + N              + AK +   
Sbjct: 538  NEQYANIRSHVLLMDPIPTISKIFSYVAQQERQLLGNTGPGINFEPKDISINAAKTVCDF 597

Query: 223  ------VSNSDYKKPQXXXXXXXXXXXXXXXXGKVCSHCGKIGHTIETCYQIHGYPPNWQ 62
                  V ++ YKK                   K C+HCGKIGHT++ CY+ HGYPP + 
Sbjct: 598  CGRIGHVESTCYKK---HGVPSNYDARNKSNGRKACTHCGKIGHTVDVCYRKHGYPPGY- 653

Query: 61   KPAS 50
            KP S
Sbjct: 654  KPYS 657


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score =  249 bits (635), Expect = 1e-63
 Identities = 131/300 (43%), Positives = 192/300 (64%), Gaps = 6/300 (2%)
 Frame = -3

Query: 895 YFVHPGDGPGSVAVTPVLSNNGANYHSWARSMRRALGGKNKFDFVDGTIEIPDSFDPSFK 716
           Y++HP DGP S+ +TP L  NG+NY +W RSM+RALG KNK  F+DG+I +PD  D + +
Sbjct: 15  YYIHPSDGPSSLIITPKL--NGSNYLAWHRSMQRALGAKNKLVFLDGSISVPDIDDLNRQ 72

Query: 715 AWSRCNMLIHSWIMNSVAETIGQSIVFLENAIDVWKELKERFSQGDLIRISDLQTEIYAL 536
           AW RCN LIHSWI+NSV E+I Q+IVF + A+  W +LKE FS+ D +R+  L++ I  L
Sbjct: 73  AWERCNHLIHSWIVNSVTESIAQTIVFHDTALSAWDDLKECFSKVDRVRVLSLRSTINNL 132

Query: 535 KQGSLTVTEFFTELKVLWEELESYMPMPVCGCRVKCSCLTGMTAAQHYHNLSKTIKFLTG 356
           KQG+ +V ++F EL  LW+EL S+ P+P C C   C C   +  A++Y    + ++FLTG
Sbjct: 133 KQGTKSVLDYFIELCTLWDELNSHRPIPNCTCIHPCRC-ESIRLAKYYRTEDQILQFLTG 191

Query: 355 LNEKFSMVKSQILLMDHLPNLNRIFSMVIQHERQYVV------NDKAKILVSNSDYKKPQ 194
           LN+ FS+VK+QILLMD LP +N+++S+V+Q E Q +V      +D + I V+ SD +K  
Sbjct: 192 LNDTFSVVKTQILLMDPLPPINKVYSLVVQEESQNIVFSTPSISDDSSISVNASDARK-F 250

Query: 193 XXXXXXXXXXXXXXXXGKVCSHCGKIGHTIETCYQIHGYPPNWQKPASNLASSSTNEGYD 14
                            + C+ C +  HTIE CY  +G+ PN+ K  S+ A+++ +E  D
Sbjct: 251 YPRGKGTSSTSANKGKDRFCTFCNRYNHTIEFCYLKYGH-PNFNKGNSS-ANNAVSEASD 308


Top