BLASTX nr result

ID: Glycyrrhiza24_contig00024964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024964
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...   228   5e-58
ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...   218   5e-55
ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   209   2e-52
ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3...   209   2e-52
ref|XP_002315633.1| multidrug resistance protein ABC transporter...   204   6e-51

>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score =  228 bits (580), Expect = 5e-58
 Identities = 114/128 (89%), Positives = 121/128 (94%)
 Frame = +3

Query: 3    VKWSVYSTFVTLAYRGVLVPVILLCQILFQVMQMGSNYWISWATEQKGRVDNRELMGTFV 182
            VKWSVYSTFV  AY+GVLVPVILLCQILFQVMQMGSNYWISWATEQKGRV+N++LMGTF 
Sbjct: 873  VKWSVYSTFVISAYKGVLVPVILLCQILFQVMQMGSNYWISWATEQKGRVNNKQLMGTFA 932

Query: 183  LLSGGSSIFIMGRTVLMATVAVETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQ 362
            LLS G +IFI+GRTVLMA VAVETAQRLF GMITSVFRAPVSFFDTTPSSRI+SRSSTDQ
Sbjct: 933  LLSFGGTIFILGRTVLMAAVAVETAQRLFLGMITSVFRAPVSFFDTTPSSRIMSRSSTDQ 992

Query: 363  STVDTDIP 386
            STVDTDIP
Sbjct: 993  STVDTDIP 1000


>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score =  218 bits (554), Expect = 5e-55
 Identities = 111/128 (86%), Positives = 118/128 (92%)
 Frame = +3

Query: 3    VKWSVYSTFVTLAYRGVLVPVILLCQILFQVMQMGSNYWISWATEQKGRVDNRELMGTFV 182
            VKWSVYSTFVT AY+G LVPVILLCQILFQVMQMGSNYWISWATEQKGRV+N++LM TFV
Sbjct: 871  VKWSVYSTFVTSAYKGALVPVILLCQILFQVMQMGSNYWISWATEQKGRVNNKQLMRTFV 930

Query: 183  LLSGGSSIFIMGRTVLMATVAVETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQ 362
            LLS   +IFI+GRTVLMA VAVETAQRLF GMITSVFRAPVSFF TTPSSRI+SRSSTDQ
Sbjct: 931  LLSLTGTIFILGRTVLMAAVAVETAQRLFLGMITSVFRAPVSFFVTTPSSRIMSRSSTDQ 990

Query: 363  STVDTDIP 386
            S VDTDIP
Sbjct: 991  SIVDTDIP 998


>ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
            3-like [Cucumis sativus]
          Length = 1444

 Score =  209 bits (532), Expect = 2e-52
 Identities = 94/128 (73%), Positives = 117/128 (91%)
 Frame = +3

Query: 3    VKWSVYSTFVTLAYRGVLVPVILLCQILFQVMQMGSNYWISWATEQKGRVDNRELMGTFV 182
            VKWSVYSTF+T AY+G LVP+ILLCQ+LFQ++QMGSNYWISWATE++G+V   +L+G F+
Sbjct: 852  VKWSVYSTFITSAYKGALVPIILLCQVLFQILQMGSNYWISWATEEEGKVSREQLLGIFI 911

Query: 183  LLSGGSSIFIMGRTVLMATVAVETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQ 362
            L+SGGSSIFI+GR VLMAT+A+ETAQR+F GM+TS+F AP+SFFD  PSS+IL+RSSTDQ
Sbjct: 912  LMSGGSSIFILGRAVLMATIAIETAQRMFLGMVTSIFAAPISFFDAKPSSQILNRSSTDQ 971

Query: 363  STVDTDIP 386
            ST+DTDIP
Sbjct: 972  STLDTDIP 979


>ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3-like [Cucumis sativus]
          Length = 1444

 Score =  209 bits (532), Expect = 2e-52
 Identities = 94/128 (73%), Positives = 117/128 (91%)
 Frame = +3

Query: 3    VKWSVYSTFVTLAYRGVLVPVILLCQILFQVMQMGSNYWISWATEQKGRVDNRELMGTFV 182
            VKWSVYSTF+T AY+G LVP+ILLCQ+LFQ++QMGSNYWISWATE++G+V   +L+G F+
Sbjct: 852  VKWSVYSTFITSAYKGALVPIILLCQVLFQILQMGSNYWISWATEEEGKVSREQLLGIFI 911

Query: 183  LLSGGSSIFIMGRTVLMATVAVETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQ 362
            L+SGGSSIFI+GR VLMAT+A+ETAQR+F GM+TS+F AP+SFFD  PSS+IL+RSSTDQ
Sbjct: 912  LMSGGSSIFILGRAVLMATIAIETAQRMFLGMVTSIFAAPISFFDAKPSSQILNRSSTDQ 971

Query: 363  STVDTDIP 386
            ST+DTDIP
Sbjct: 972  STLDTDIP 979


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1044

 Score =  204 bits (519), Expect = 6e-51
 Identities = 96/128 (75%), Positives = 114/128 (89%)
 Frame = +3

Query: 3   VKWSVYSTFVTLAYRGVLVPVILLCQILFQVMQMGSNYWISWATEQKGRVDNRELMGTFV 182
           VKWSVYSTF+T AY+G LVP+ILLCQ+LFQ +QMGSNYWI+WATE+  +V   +L+G F+
Sbjct: 484 VKWSVYSTFITSAYKGALVPIILLCQVLFQGLQMGSNYWIAWATEENHKVTKEKLIGIFI 543

Query: 183 LLSGGSSIFIMGRTVLMATVAVETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQ 362
           LLSGGSS+FI+GR V +AT+A+ETAQRLF GMI+SVFRA +SFFD TPSSRILSRSSTDQ
Sbjct: 544 LLSGGSSVFILGRAVFLATIAIETAQRLFLGMISSVFRASISFFDATPSSRILSRSSTDQ 603

Query: 363 STVDTDIP 386
           STVDTDIP
Sbjct: 604 STVDTDIP 611


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