BLASTX nr result
ID: Glycyrrhiza24_contig00024960
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00024960
(689 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containi... 264 1e-68
ref|XP_003541878.1| PREDICTED: pentatricopeptide repeat-containi... 248 8e-64
ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containi... 214 1e-53
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2... 211 8e-53
ref|XP_003541012.1| PREDICTED: pentatricopeptide repeat-containi... 206 5e-51
>ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
mitochondrial [Glycine max]
Length = 755
Score = 264 bits (674), Expect = 1e-68
Identities = 144/230 (62%), Positives = 166/230 (72%), Gaps = 4/230 (1%)
Frame = +1
Query: 10 EVSPSPSSYEKLVLHSCA---LLKNYEELKQSEFKATKQIFMELINTYAACGQLEKAKQV 180
+V P ++ L+ +S ++K YEELKQS ATKQIFM L+N YAACGQLEKAK+V
Sbjct: 519 DVKPDSQTFSYLISNSETEEDIVKYYEELKQSGIVATKQIFMALVNAYAACGQLEKAKKV 578
Query: 181 TLDPLIPVKSLNQIKSVLVSVLASHGQLSEALPLYEEIKQAGLSLEPKDVMSLIEHTRSD 360
LDPLIP KSLNQIK LVSVLASHG+LSEAL +YEEIKQ+G LE K+V SLIEHT S+
Sbjct: 579 ILDPLIPPKSLNQIKGFLVSVLASHGKLSEALVIYEEIKQSGHKLEAKEVTSLIEHTHSE 638
Query: 361 GXXXXXXXXXXXXNNTSYWIYACCRIILYCIWNKHLSSAVXXXXXXXXXXXXNELVMKVL 540
G ++T YW ACCRIILYCIWNKHLSSAV +E VM+ L
Sbjct: 639 GELDRLLLLLKELDDTDYWNDACCRIILYCIWNKHLSSAVELCNLLKDKFQSDEQVMEFL 698
Query: 541 FDKVFSSIEES-ESNHLHSCVELISEIKDKLGLLPSQKCYDSLLAALANA 687
FDKVFS IEES ES+HLH+C EL+SEIKDKLGLLPS K +DSLL A ANA
Sbjct: 699 FDKVFSLIEESEESSHLHTCSELLSEIKDKLGLLPSHKRHDSLLCACANA 748
>ref|XP_003541878.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21880,
mitochondrial-like [Glycine max]
Length = 705
Score = 248 bits (633), Expect = 8e-64
Identities = 137/227 (60%), Positives = 160/227 (70%), Gaps = 3/227 (1%)
Frame = +1
Query: 10 EVSPSPSSYEKLVLHSCA---LLKNYEELKQSEFKATKQIFMELINTYAACGQLEKAKQV 180
+V P ++ L+ +S + K YEELKQS ATKQIFM LIN YAACGQLEKAK+V
Sbjct: 473 DVKPDSQTFSCLISNSETKEDIAKYYEELKQSGIVATKQIFMALINAYAACGQLEKAKKV 532
Query: 181 TLDPLIPVKSLNQIKSVLVSVLASHGQLSEALPLYEEIKQAGLSLEPKDVMSLIEHTRSD 360
LDPLIP KSLNQIK LVSVLASHGQLS AL +Y++IKQ+G LE K++ SLIEHT S+
Sbjct: 533 ILDPLIPPKSLNQIKGFLVSVLASHGQLSGALVIYDKIKQSGHKLEAKEITSLIEHTHSE 592
Query: 361 GXXXXXXXXXXXXNNTSYWIYACCRIILYCIWNKHLSSAVXXXXXXXXXXXXNELVMKVL 540
G ++T YW ACCRIILYCIWNKHLSSAV +E VM+ L
Sbjct: 593 GELDRLLLLLEELDDTDYWNDACCRIILYCIWNKHLSSAVELCNLLMDKFQSDEQVMEFL 652
Query: 541 FDKVFSSIEESESNHLHSCVELISEIKDKLGLLPSQKCYDSLLAALA 681
FDKVFS IE ES+HLH+ +EL+SEIKDKLGLLPSQK +DSLL A
Sbjct: 653 FDKVFSLIE--ESSHLHTFLELLSEIKDKLGLLPSQKRHDSLLRVTA 697
>ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
mitochondrial-like [Glycine max]
Length = 1117
Score = 214 bits (545), Expect = 1e-53
Identities = 115/208 (55%), Positives = 147/208 (70%)
Frame = +1
Query: 64 LLKNYEELKQSEFKATKQIFMELINTYAACGQLEKAKQVTLDPLIPVKSLNQIKSVLVSV 243
++K EE+KQS ATKQIFM LIN+YAA G+LEKAKQV LD IP KSLN+IKSVLVS
Sbjct: 834 IIKYCEEMKQSGVHATKQIFMALINSYAASGKLEKAKQVVLDSNIPNKSLNEIKSVLVSA 893
Query: 244 LASHGQLSEALPLYEEIKQAGLSLEPKDVMSLIEHTRSDGXXXXXXXXXXXXNNTSYWIY 423
LASHGQLSEAL +YEEIK+AG +LEPK V++LIE T+ +G N+ YW+
Sbjct: 894 LASHGQLSEALLVYEEIKKAGHNLEPKAVITLIEFTKFNGELDGLLLLLEEMNDVDYWVD 953
Query: 424 ACCRIILYCIWNKHLSSAVXXXXXXXXXXXXNELVMKVLFDKVFSSIEESESNHLHSCVE 603
C ++I+YCI NK+LSS + ++LVM+ LFD VFS I SES+HL ++
Sbjct: 954 GCFKVIMYCIRNKNLSSTILLFKQLKDKFKNDDLVMEALFDAVFSLIASSESSHLQIGLD 1013
Query: 604 LISEIKDKLGLLPSQKCYDSLLAALANA 687
L+ IKD+LGL+PS++C D LL+A ANA
Sbjct: 1014 LLWAIKDELGLMPSRQCLDFLLSACANA 1041
>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
predicted protein [Populus trichocarpa]
Length = 784
Score = 211 bits (538), Expect = 8e-53
Identities = 114/230 (49%), Positives = 150/230 (65%), Gaps = 4/230 (1%)
Frame = +1
Query: 10 EVSPSPSSYEKLVLHSC----ALLKNYEELKQSEFKATKQIFMELINTYAACGQLEKAKQ 177
+V P SSY L+ +C ++K YEE+K + + +KQIFM LIN YA CGQ EKAKQ
Sbjct: 468 DVKPDSSSYSYLI-SNCNNEEEIIKYYEEMKVAGIQVSKQIFMALINAYATCGQFEKAKQ 526
Query: 178 VTLDPLIPVKSLNQIKSVLVSVLASHGQLSEALPLYEEIKQAGLSLEPKDVMSLIEHTRS 357
V LD P+K LN+I+SVLVS LASHGQ+++AL LYEE+KQAG +LEPK V+SLIEH S
Sbjct: 527 VLLDKEFPIKHLNEIRSVLVSALASHGQMTDALNLYEEMKQAGSNLEPKAVISLIEHVDS 586
Query: 358 DGXXXXXXXXXXXXNNTSYWIYACCRIILYCIWNKHLSSAVXXXXXXXXXXXXNELVMKV 537
+G ++ +YW+ C R+ILYCI NK L SAV +EL M+V
Sbjct: 587 EGEQSRLLKLLEELDDHNYWVDGCFRVILYCIRNKDLRSAVDLLKQLKDRFSDDELAMEV 646
Query: 538 LFDKVFSSIEESESNHLHSCVELISEIKDKLGLLPSQKCYDSLLAALANA 687
LFD+VFS + E+E ++ ++L+ IKD+LG PS+KC D LL A NA
Sbjct: 647 LFDEVFSQVAETEPANVRIGMDLLQAIKDELGASPSRKCLDFLLTACVNA 696
>ref|XP_003541012.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
mitochondrial-like [Glycine max]
Length = 346
Score = 206 bits (523), Expect = 5e-51
Identities = 116/230 (50%), Positives = 154/230 (66%), Gaps = 5/230 (2%)
Frame = +1
Query: 13 VSPSPSSYEKLVLHSCA----LLKNYEELKQSEFKATKQIFMELINTYAACGQLEKAKQV 180
V P +Y L+ +C ++K EE+KQS +ATKQIFM LIN+YAA G++EKAKQV
Sbjct: 79 VKPDSQTYSYLI-RNCEKEEDIMKYCEEIKQSGVQATKQIFMALINSYAASGKMEKAKQV 137
Query: 181 TLDPLIPVKSLNQIKSVLVSVLASHGQLSEALPLYEEIKQAGLSLEPKDVMSLIEH-TRS 357
LDP+IP KSLN+IKSVLVS LASHGQLSEAL +YEEIK+AG +L PK V++LIE T+
Sbjct: 138 VLDPIIPNKSLNEIKSVLVSALASHGQLSEALLVYEEIKKAGHNLRPKAVITLIEELTKF 197
Query: 358 DGXXXXXXXXXXXXNNTSYWIYACCRIILYCIWNKHLSSAVXXXXXXXXXXXXNELVMKV 537
+G ++ YW+ C ++I+YCI NK+LSSA+ +E+V +
Sbjct: 198 NGELDGLLLLLEEISDLDYWVDGCFKVIMYCIRNKNLSSAIVLFKQLKDKFKNDEIVTEA 257
Query: 538 LFDKVFSSIEESESNHLHSCVELISEIKDKLGLLPSQKCYDSLLAALANA 687
LFD VFS I SE HL ++L+ IKD+LGL+ S++C D LL+A ANA
Sbjct: 258 LFDAVFSLIAVSEFTHLQIGLDLLWAIKDELGLMASRQCLDFLLSACANA 307