BLASTX nr result

ID: Glycyrrhiza24_contig00024959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024959
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...    92   6e-17
ref|XP_002511421.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like...    90   2e-16
ref|XP_002517352.1| zinc finger protein, putative [Ricinus commu...    89   3e-16
gb|AFK38839.1| unknown [Lotus japonicus]                               88   6e-16

>ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Vitis vinifera]
          Length = 188

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = +2

Query: 8   SLVDCAVCLDSFKVGDVCRLLPNCSHSFHVQCIDLWILKTPFCPICRT 151
           S VDCAVCLD+FK+GD CRLLP C+HSFH QC+D W+LKTP CPICRT
Sbjct: 71  SPVDCAVCLDNFKMGDKCRLLPLCNHSFHAQCVDSWLLKTPICPICRT 118


>ref|XP_002511421.1| conserved hypothetical protein [Ricinus communis]
           gi|223550536|gb|EEF52023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
 Frame = +2

Query: 17  DCAVCLDSFKVGDVCRLLPNCSHSFHVQCIDLWILKTPFCPICRTWVHS-RVMMMKEEES 193
           DC VCL++F VGD C+LLPNC HSFH QCID W++KTP CPICRT V++ +V ++  +ES
Sbjct: 81  DCVVCLENFNVGDKCKLLPNCKHSFHSQCIDSWLVKTPICPICRTIVNTPKVGLVLRQES 140

Query: 194 VVPDNVEIEM 223
            +   V +E+
Sbjct: 141 SISIAVGVEI 150


>ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 146

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = +2

Query: 8   SLVDCAVCLDSFKVGDVCRLLPNCSHSFHVQCIDLWILKTPFCPICRTWVHS-RVMMMKE 184
           S VDCAVCL++F+ GD CRLLPNC H FH QCID W+LKTP CPICRT   + ++     
Sbjct: 73  SPVDCAVCLENFRKGDKCRLLPNCKHFFHSQCIDSWLLKTPICPICRTCASTPKISTFSG 132

Query: 185 EESVVPDNVEIEM 223
           +ES +  +V  E+
Sbjct: 133 QESGISRDVGAEL 145


>ref|XP_002517352.1| zinc finger protein, putative [Ricinus communis]
           gi|223543363|gb|EEF44894.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 200

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
 Frame = +2

Query: 8   SLVDCAVCLDSFKVGDVCRLLPNCSHSFHVQCIDLWILKTPFCPICRTWVHSR--VMMMK 181
           S VDCAVCLD+F+ GD CRLLP C HSFH QC+D W+LKTP CPICR    SR   + + 
Sbjct: 72  SPVDCAVCLDNFRAGDKCRLLPICKHSFHAQCVDEWLLKTPICPICRASAGSRRGSVAIG 131

Query: 182 EEESVVPD 205
           EE S + D
Sbjct: 132 EESSHLSD 139


>gb|AFK38839.1| unknown [Lotus japonicus]
          Length = 188

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = +2

Query: 5   CSLVDCAVCLDSFKVGDVCRLLPNCSHSFHVQCIDLWILKTPFCPICRTWVHSRVM--MM 178
           CS VDCAVCL++   GD CRLLP C HSFH QC+D W+LKTP CPICR+   S      +
Sbjct: 85  CSPVDCAVCLENLTTGDKCRLLPVCKHSFHAQCVDTWLLKTPICPICRSSAGSSHSGNQV 144

Query: 179 KEEESVVPDNVEIEM 223
           +  ES    NV IEM
Sbjct: 145 QVVESGSSRNVAIEM 159


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