BLASTX nr result
ID: Glycyrrhiza24_contig00024954
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00024954
(352 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003625140.1| Pentatricopeptide repeat-containing protein ... 245 3e-63
ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi... 241 3e-62
emb|CBI29835.3| unnamed protein product [Vitis vinifera] 241 3e-62
ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containi... 238 4e-61
ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containi... 235 3e-60
>ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 855
Score = 245 bits (625), Expect = 3e-63
Identities = 112/117 (95%), Positives = 115/117 (98%)
Frame = -2
Query: 351 WVQNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRV 172
W++NQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQK RCKPDAETYNALINAHGR
Sbjct: 139 WMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRA 198
Query: 171 GQWRWAMNIMEDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 1
GQWRWAMNIM+DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL
Sbjct: 199 GQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 255
Score = 57.0 bits (136), Expect = 2e-06
Identities = 29/103 (28%), Positives = 62/103 (60%)
Frame = -2
Query: 309 YNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRVGQWRWAMNIMEDML 130
YN ++ +A ++A +F E+++ +PD +Y +L+NA+GR + + A I + +
Sbjct: 365 YNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIK 424
Query: 129 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 1
R + P+ +YN LI+A GS+G ++A+ + ++M + + P++
Sbjct: 425 RNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNV 467
>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 241 bits (616), Expect = 3e-62
Identities = 109/117 (93%), Positives = 113/117 (96%)
Frame = -2
Query: 351 WVQNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRV 172
W++NQKNYCAR DIYNMMIRLHARHN DQARGLFFEMQKWRCKPDAETYNALINAHGR
Sbjct: 151 WMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRA 210
Query: 171 GQWRWAMNIMEDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 1
GQWRWAMNIM+DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT+NGVGPDL
Sbjct: 211 GQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDL 267
Score = 69.7 bits (169), Expect = 2e-10
Identities = 38/103 (36%), Positives = 59/103 (57%)
Frame = -2
Query: 309 YNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRVGQWRWAMNIMEDML 130
YN +I +A H +A +F E++K PD +Y +L+NA+G+ G+ AM + E M
Sbjct: 377 YNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMR 436
Query: 129 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 1
R P+ +YN LI+A GS G EA+ + +M NGV P++
Sbjct: 437 RNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNI 479
Score = 54.7 bits (130), Expect = 8e-06
Identities = 32/106 (30%), Positives = 54/106 (50%)
Frame = -2
Query: 318 TDIYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRVGQWRWAMNIME 139
T YN I + D+A L+ M+ + KPD TYN LI+ ++ ++ A+ ++
Sbjct: 514 TTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLD 573
Query: 138 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 1
+M+ IP S+ Y+++I A G EA ++ KM G PD+
Sbjct: 574 EMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDV 619
>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 241 bits (616), Expect = 3e-62
Identities = 109/117 (93%), Positives = 113/117 (96%)
Frame = -2
Query: 351 WVQNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRV 172
W++NQKNYCAR DIYNMMIRLHARHN DQARGLFFEMQKWRCKPDAETYNALINAHGR
Sbjct: 151 WMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNALINAHGRA 210
Query: 171 GQWRWAMNIMEDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 1
GQWRWAMNIM+DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT+NGVGPDL
Sbjct: 211 GQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDL 267
Score = 69.7 bits (169), Expect = 2e-10
Identities = 38/103 (36%), Positives = 59/103 (57%)
Frame = -2
Query: 309 YNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRVGQWRWAMNIMEDML 130
YN +I +A H +A +F E++K PD +Y +L+NA+G+ G+ AM + E M
Sbjct: 377 YNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMR 436
Query: 129 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 1
R P+ +YN LI+A GS G EA+ + +M NGV P++
Sbjct: 437 RNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNI 479
Score = 54.7 bits (130), Expect = 8e-06
Identities = 32/106 (30%), Positives = 54/106 (50%)
Frame = -2
Query: 318 TDIYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRVGQWRWAMNIME 139
T YN I + D+A L+ M+ + KPD TYN LI+ ++ ++ A+ ++
Sbjct: 514 TTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLD 573
Query: 138 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 1
+M+ IP S+ Y+++I A G EA ++ KM G PD+
Sbjct: 574 EMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDV 619
>ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 238 bits (607), Expect = 4e-61
Identities = 107/117 (91%), Positives = 113/117 (96%)
Frame = -2
Query: 351 WVQNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRV 172
W++NQKNY AR DIYNMMIRLHARHNRTDQARGLFFEMQ+WRCKPD ETYNA+INAHGR
Sbjct: 140 WLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHGRA 199
Query: 171 GQWRWAMNIMEDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 1
GQWRWAMNIM+DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT+NGVGPDL
Sbjct: 200 GQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDL 256
Score = 61.6 bits (148), Expect = 6e-08
Identities = 32/103 (31%), Positives = 59/103 (57%)
Frame = -2
Query: 309 YNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRVGQWRWAMNIMEDML 130
YN +I +A ++A F E+++ +PD +Y +L+NA+GR + A I + M
Sbjct: 366 YNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMK 425
Query: 129 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 1
R + P+ +YN LI+A GS+G +A+ + ++M G+ P++
Sbjct: 426 RNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNV 468
>ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 235 bits (599), Expect = 3e-60
Identities = 105/117 (89%), Positives = 110/117 (94%)
Frame = -2
Query: 351 WVQNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRV 172
W++NQ+NYCAR DIYNMMIRLHARHNR DQARGLFFEMQKWRCKPD ETYNALINAHGR
Sbjct: 19 WMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALINAHGRA 78
Query: 171 GQWRWAMNIMEDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 1
GQWRWA NIMEDMLRAAIPPSRST+NNLINACGS GNW+EAL VCKKMTDNGVGPDL
Sbjct: 79 GQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDL 135
Score = 60.8 bits (146), Expect = 1e-07
Identities = 32/103 (31%), Positives = 58/103 (56%)
Frame = -2
Query: 309 YNMMIRLHARHNRTDQARGLFFEMQKWRCKPDAETYNALINAHGRVGQWRWAMNIMEDML 130
YN +I +A H +A +F EM++ PD +Y +LI+ GR Q A + + M
Sbjct: 245 YNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMK 304
Query: 129 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDL 1
R P+ +YN L++A GS+G +A+++ ++M +G+ P++
Sbjct: 305 RNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNV 347