BLASTX nr result

ID: Glycyrrhiza24_contig00024945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024945
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup1...   354   1e-95
ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup1...   353   2e-95
ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicag...   349   4e-94
ref|XP_002526002.1| protein with unknown function [Ricinus commu...   330   2e-88
ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup1...   328   7e-88

>ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max]
          Length = 1486

 Score =  354 bits (908), Expect = 1e-95
 Identities = 169/174 (97%), Positives = 173/174 (99%)
 Frame = -2

Query: 523 MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEV 344
           MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEV
Sbjct: 1   MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEV 60

Query: 343 VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDTWDGQCPEYSGE 164
           VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFD WDGQCPE+SGE
Sbjct: 61  VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEFSGE 120

Query: 163 EQAICAVGLAKSKPGVFVEAIRYLLILATPVELILVGVCCSGGADGSDPFAEVS 2
           EQAICAVGLAKSKPGVFVEAI+YLL+LATPVELILVGVCCSGGADGSDPFAEV+
Sbjct: 121 EQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGADGSDPFAEVT 174


>ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max]
          Length = 1485

 Score =  353 bits (907), Expect = 2e-95
 Identities = 168/174 (96%), Positives = 173/174 (99%)
 Frame = -2

Query: 523 MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEV 344
           MSWEDEIVMRDVTNAGLV+SDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEV
Sbjct: 1   MSWEDEIVMRDVTNAGLVISDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEV 60

Query: 343 VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDTWDGQCPEYSGE 164
           VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFD WDGQCPE+SGE
Sbjct: 61  VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEFSGE 120

Query: 163 EQAICAVGLAKSKPGVFVEAIRYLLILATPVELILVGVCCSGGADGSDPFAEVS 2
           EQAICAVGLAKSKPGVFVEAI+YLL+LATPVELILVGVCCSGGADGSDPFAEV+
Sbjct: 121 EQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGADGSDPFAEVT 174


>ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicago truncatula]
           gi|355524966|gb|AET05420.1| Nuclear pore complex protein
           Nup155 [Medicago truncatula]
          Length = 1484

 Score =  349 bits (895), Expect = 4e-94
 Identities = 167/174 (95%), Positives = 171/174 (98%)
 Frame = -2

Query: 523 MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEV 344
           MSWEDEIV+RDVTNAGLVVSDRIGRE+SSQLDLEE+LEASRYASHPYSTHPREWPPLVEV
Sbjct: 1   MSWEDEIVIRDVTNAGLVVSDRIGREISSQLDLEESLEASRYASHPYSTHPREWPPLVEV 60

Query: 343 VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDTWDGQCPEYSGE 164
            NTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFD WDGQCPEYSGE
Sbjct: 61  ANTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGE 120

Query: 163 EQAICAVGLAKSKPGVFVEAIRYLLILATPVELILVGVCCSGGADGSDPFAEVS 2
           EQAICAVGLAKSK GVFVEAI+YLLILATPVELILVGVCCSGGADGSDPFAEVS
Sbjct: 121 EQAICAVGLAKSKHGVFVEAIQYLLILATPVELILVGVCCSGGADGSDPFAEVS 174


>ref|XP_002526002.1| protein with unknown function [Ricinus communis]
           gi|223534734|gb|EEF36426.1| protein with unknown
           function [Ricinus communis]
          Length = 1490

 Score =  330 bits (846), Expect = 2e-88
 Identities = 152/174 (87%), Positives = 166/174 (95%)
 Frame = -2

Query: 523 MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEV 344
           MSWE+E+V+RDV +AG+ VSDRIGREV+SQLDLEEALEASRY SHPYSTHPREWPPL+EV
Sbjct: 1   MSWEEEVVLRDVASAGIAVSDRIGREVASQLDLEEALEASRYVSHPYSTHPREWPPLIEV 60

Query: 343 VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDTWDGQCPEYSGE 164
            +TWELPPVLIERYNAAGGEGTA CGIFP+IRRAWASVDNSLFLWRFD WDGQCPEY GE
Sbjct: 61  GDTWELPPVLIERYNAAGGEGTALCGIFPQIRRAWASVDNSLFLWRFDKWDGQCPEYRGE 120

Query: 163 EQAICAVGLAKSKPGVFVEAIRYLLILATPVELILVGVCCSGGADGSDPFAEVS 2
           EQAICAVGLAKSKPGVFVEAI+YLL+LATPVELILVGVCCSGG DG+DP+AE+S
Sbjct: 121 EQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGGDGTDPYAEIS 174


>ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup155-like [Vitis
           vinifera]
          Length = 1496

 Score =  328 bits (841), Expect = 7e-88
 Identities = 153/174 (87%), Positives = 165/174 (94%)
 Frame = -2

Query: 523 MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTHPREWPPLVEV 344
           MSW+DEIV+RDVTNAGLVVSDRI R+V++Q DLEEALEASRY SHPYSTHPREWPPLVEV
Sbjct: 1   MSWDDEIVVRDVTNAGLVVSDRINRDVAAQTDLEEALEASRYTSHPYSTHPREWPPLVEV 60

Query: 343 VNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDTWDGQCPEYSGE 164
           ++TWELPPVLIERYNAAGGEGTA CG+FPEIRRAWASVDNSLFLWRFD WDGQCPEYSGE
Sbjct: 61  MDTWELPPVLIERYNAAGGEGTALCGVFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGE 120

Query: 163 EQAICAVGLAKSKPGVFVEAIRYLLILATPVELILVGVCCSGGADGSDPFAEVS 2
           EQAICAVGLAKSKPGVFVEAI+YLL+LATPVELILVGVCC G  DG+DP+ EVS
Sbjct: 121 EQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCCGRGDGTDPYEEVS 174


Top