BLASTX nr result

ID: Glycyrrhiza24_contig00024938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024938
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782...   123   1e-26
ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806...   111   5e-23
ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781...   111   7e-23
ref|XP_003627583.1| hypothetical protein MTR_8g030800, partial [...   110   9e-23
ref|XP_003623963.1| Mediator of RNA polymerase II transcription ...   102   3e-20

>ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782672 [Glycine max]
          Length = 2235

 Score =  123 bits (309), Expect = 1e-26
 Identities = 66/90 (73%), Positives = 75/90 (83%), Gaps = 3/90 (3%)
 Frame = -2

Query: 262 KDLSQVHIAVRILKMKMRDVKISPRSM---HRASYVAKHSSQRHNRGYVGSESKLKSSSK 92
           KDLSQVHIAVR+LKMK+RDVKIS +     HRAS++AKHSSQRHN  YVG+ S+L+SSSK
Sbjct: 589 KDLSQVHIAVRLLKMKIRDVKISQKQTNENHRASHLAKHSSQRHNWNYVGNVSRLRSSSK 648

Query: 91  CMDQSTSSSVIFESPGPLHDIIVCWIDQHV 2
               ST SSV FESPGPLHDI+VCWIDQHV
Sbjct: 649 ----STGSSV-FESPGPLHDIVVCWIDQHV 673


>ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max]
          Length = 2279

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/93 (58%), Positives = 72/93 (77%), Gaps = 6/93 (6%)
 Frame = -2

Query: 262 KDLSQVHIAVRILKMKMRDVKISPRSMHRA------SYVAKHSSQRHNRGYVGSESKLKS 101
           KDLS VHIA+R+LKMK+RD++ISP+    +      SY+AK SSQ+ N+ +V +  K+KS
Sbjct: 606 KDLSHVHIAIRLLKMKLRDMQISPKHKSGSTRGCGVSYLAKCSSQQRNQNFVNNAFKIKS 665

Query: 100 SSKCMDQSTSSSVIFESPGPLHDIIVCWIDQHV 2
           SS+ +DQ+  SS +FESPGPLHDIIVCWIDQH+
Sbjct: 666 SSRNLDQNICSSAVFESPGPLHDIIVCWIDQHM 698


>ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781696 [Glycine max]
          Length = 2240

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 3/90 (3%)
 Frame = -2

Query: 262 KDLSQVHIAVRILKMKMRDVKISPRSM---HRASYVAKHSSQRHNRGYVGSESKLKSSSK 92
           KDLSQVHIAVR+L MK+RDVKIS +     HRAS++AK+SSQ  N  YVG+ S+ KSSSK
Sbjct: 589 KDLSQVHIAVRLLLMKIRDVKISQKQTNENHRASHLAKNSSQCQNWNYVGNVSRSKSSSK 648

Query: 91  CMDQSTSSSVIFESPGPLHDIIVCWIDQHV 2
            M  S     +FESPGPLHDIIVCWIDQHV
Sbjct: 649 SMGSS-----VFESPGPLHDIIVCWIDQHV 673


>ref|XP_003627583.1| hypothetical protein MTR_8g030800, partial [Medicago truncatula]
           gi|355521605|gb|AET02059.1| hypothetical protein
           MTR_8g030800, partial [Medicago truncatula]
          Length = 1823

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/91 (64%), Positives = 65/91 (71%), Gaps = 4/91 (4%)
 Frame = -2

Query: 262 KDLSQVHIAVRILKMKMRDVKIS----PRSMHRASYVAKHSSQRHNRGYVGSESKLKSSS 95
           KDLSQVHIAVR+LKMK+RDVK S     RS+HRASY AKH SQRHN+ Y+          
Sbjct: 742 KDLSQVHIAVRLLKMKLRDVKSSLRRAKRSIHRASYAAKHESQRHNQNYI---------- 791

Query: 94  KCMDQSTSSSVIFESPGPLHDIIVCWIDQHV 2
                +T SSVI ESPGPLHDIIVCWIDQHV
Sbjct: 792 -----TTGSSVISESPGPLHDIIVCWIDQHV 817


>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
           dehydrogenase, lipoyl-binding site [Medicago truncatula]
           gi|355498978|gb|AES80181.1| Mediator of RNA polymerase
           II transcription subunit [Medicago truncatula]
          Length = 2270

 Score =  102 bits (254), Expect = 3e-20
 Identities = 55/92 (59%), Positives = 66/92 (71%), Gaps = 5/92 (5%)
 Frame = -2

Query: 262 KDLSQVHIAVRILKMKMRDVKISPRSM-----HRASYVAKHSSQRHNRGYVGSESKLKSS 98
           KD+SQVHIAVRILKMK+R++      M     H A Y+AK SSQ++N  Y     K+KSS
Sbjct: 606 KDISQVHIAVRILKMKLRNMHTLSTQMNGSTHHGAGYLAKCSSQQNNWNY---GCKIKSS 662

Query: 97  SKCMDQSTSSSVIFESPGPLHDIIVCWIDQHV 2
           SK M+Q   SS+ FESPGPLHDIIVCWIDQH+
Sbjct: 663 SKTMNQIIRSSIAFESPGPLHDIIVCWIDQHI 694


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