BLASTX nr result

ID: Glycyrrhiza24_contig00024924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024924
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38607.1| unknown [Lotus japonicus]                              114   7e-24
ref|XP_003543798.1| PREDICTED: reticulon-like protein B16-like [...   114   9e-24
ref|NP_001242658.1| uncharacterized protein LOC100776896 [Glycin...   114   1e-23
ref|XP_003618508.1| Reticulon-like protein B16 [Medicago truncat...   110   2e-22
ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13

>gb|AFK38607.1| unknown [Lotus japonicus]
          Length = 198

 Score =  114 bits (286), Expect = 7e-24
 Identities = 55/62 (88%), Positives = 59/62 (95%)
 Frame = +2

Query: 341 MSESDGQLPTAFVADVLLWKRWQVSLGVIVVATVAWLLLEWTSLPFLTICSDVLLILIVL 520
           MSESD Q+PTAFVADV+LWKRW VSLGVI+VATVAW+LLEWT LPFLTICSDVLLILIVL
Sbjct: 1   MSESDTQVPTAFVADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDVLLILIVL 60

Query: 521 LF 526
           LF
Sbjct: 61  LF 62


>ref|XP_003543798.1| PREDICTED: reticulon-like protein B16-like [Glycine max]
          Length = 198

 Score =  114 bits (285), Expect = 9e-24
 Identities = 55/62 (88%), Positives = 58/62 (93%)
 Frame = +2

Query: 341 MSESDGQLPTAFVADVLLWKRWQVSLGVIVVATVAWLLLEWTSLPFLTICSDVLLILIVL 520
           MSES+ +LPTAFV DVLLWKRW VSLGVIVVATVAW+L EWTSLPFLTICSDVLLILIVL
Sbjct: 1   MSESEAELPTAFVGDVLLWKRWHVSLGVIVVATVAWVLFEWTSLPFLTICSDVLLILIVL 60

Query: 521 LF 526
           LF
Sbjct: 61  LF 62


>ref|NP_001242658.1| uncharacterized protein LOC100776896 [Glycine max]
           gi|255640738|gb|ACU20653.1| unknown [Glycine max]
          Length = 198

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/62 (88%), Positives = 58/62 (93%)
 Frame = +2

Query: 341 MSESDGQLPTAFVADVLLWKRWQVSLGVIVVATVAWLLLEWTSLPFLTICSDVLLILIVL 520
           MSES+ QLPTAFVAD LLWKRW VSLG+IVVATVAW+L EWTSLPFLTICSDVLLILIVL
Sbjct: 1   MSESEAQLPTAFVADGLLWKRWHVSLGIIVVATVAWVLFEWTSLPFLTICSDVLLILIVL 60

Query: 521 LF 526
           LF
Sbjct: 61  LF 62


>ref|XP_003618508.1| Reticulon-like protein B16 [Medicago truncatula]
           gi|355493523|gb|AES74726.1| Reticulon-like protein B16
           [Medicago truncatula]
          Length = 198

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/62 (85%), Positives = 56/62 (90%)
 Frame = +2

Query: 341 MSESDGQLPTAFVADVLLWKRWQVSLGVIVVATVAWLLLEWTSLPFLTICSDVLLILIVL 520
           MSESD Q P  FV+DVLLWKRWQVS GVIVV+TVAWLLLEWT LPFLTICSDVLL+LIVL
Sbjct: 1   MSESDTQPPVTFVSDVLLWKRWQVSFGVIVVSTVAWLLLEWTDLPFLTICSDVLLLLIVL 60

Query: 521 LF 526
           LF
Sbjct: 61  LF 62


>ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|222862357|gb|EEE99863.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/49 (77%), Positives = 42/49 (85%)
 Frame = +2

Query: 380 ADVLLWKRWQVSLGVIVVATVAWLLLEWTSLPFLTICSDVLLILIVLLF 526
           ADVLLWK W VS GVI+VATV+W + E + LPFLTICSDVLLILIVLLF
Sbjct: 60  ADVLLWKWWHVSFGVIMVATVSWFIFERSGLPFLTICSDVLLILIVLLF 108


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