BLASTX nr result

ID: Glycyrrhiza24_contig00024919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00024919
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525906.1| PREDICTED: uncharacterized protein LOC100793...   169   2e-40
ref|XP_003589130.1| Basic helix-loop-helix protein, putative [Me...   168   5e-40
ref|XP_003523607.1| PREDICTED: uncharacterized protein LOC100817...   164   7e-39
ref|XP_002282986.1| PREDICTED: uncharacterized protein LOC100267...   149   2e-34
emb|CAN61027.1| hypothetical protein VITISV_001147 [Vitis vinifera]   147   7e-34

>ref|XP_003525906.1| PREDICTED: uncharacterized protein LOC100793250 [Glycine max]
          Length = 323

 Score =  169 bits (428), Expect = 2e-40
 Identities = 79/103 (76%), Positives = 86/103 (83%), Gaps = 2/103 (1%)
 Frame = -3

Query: 303 MENGXXXXXXXXXXXLRSICSFPNSSTSSKWVYAVFWRIVPRNFPPPRWEFGGSALDLSK 124
           ME+G           LR+IC+ PNSST SKWVYAVFWRI+PRNFPPPRWEFGG+ALDLSK
Sbjct: 1   MESGLPLLNYLLQQTLRTICTSPNSSTPSKWVYAVFWRILPRNFPPPRWEFGGTALDLSK 60

Query: 123 GNKRNWILVWEDGFCDFNECEQRR--SEYLNDKFGADVFFKMS 1
           GNKRNWILVWEDGFCDFNECEQR+  S YLN +FGADVFFKMS
Sbjct: 61  GNKRNWILVWEDGFCDFNECEQRKSGSGYLNGRFGADVFFKMS 103


>ref|XP_003589130.1| Basic helix-loop-helix protein, putative [Medicago truncatula]
           gi|87240766|gb|ABD32624.1| hypothetical protein
           MtrDRAFT_AC150207g14v2 [Medicago truncatula]
           gi|355478178|gb|AES59381.1| Basic helix-loop-helix
           protein, putative [Medicago truncatula]
          Length = 321

 Score =  168 bits (425), Expect = 5e-40
 Identities = 75/101 (74%), Positives = 85/101 (84%)
 Frame = -3

Query: 303 MENGXXXXXXXXXXXLRSICSFPNSSTSSKWVYAVFWRIVPRNFPPPRWEFGGSALDLSK 124
           ME+G           LR++CSFP SSTSSKWVYAVFWR+VPR FPPPRWEFGG++LD SK
Sbjct: 1   MESGLPLLHSLLQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSK 60

Query: 123 GNKRNWILVWEDGFCDFNECEQRRSEYLNDKFGADVFFKMS 1
           GNKRNWI+VWEDGFCDFNECEQR+S  LN++FGADVFFKMS
Sbjct: 61  GNKRNWIIVWEDGFCDFNECEQRKSGCLNERFGADVFFKMS 101


>ref|XP_003523607.1| PREDICTED: uncharacterized protein LOC100817704 [Glycine max]
          Length = 321

 Score =  164 bits (415), Expect = 7e-39
 Identities = 76/103 (73%), Positives = 85/103 (82%), Gaps = 2/103 (1%)
 Frame = -3

Query: 303 MENGXXXXXXXXXXXLRSICSFPNSSTSSKWVYAVFWRIVPRNFPPPRWEFGGSALDLSK 124
           ME+G           LR+IC+ PNSST SKWVYAVFWRI+PRNFPPPRWE GG+ALDLSK
Sbjct: 1   MESGLPLLNCLLQQTLRTICTSPNSSTPSKWVYAVFWRILPRNFPPPRWELGGTALDLSK 60

Query: 123 GNKRNWILVWEDGFCDFNECEQRR--SEYLNDKFGADVFFKMS 1
           GNKRNWILVWEDGFCDFNECEQR+  S YLN +FGA++FFKMS
Sbjct: 61  GNKRNWILVWEDGFCDFNECEQRKSGSGYLNGRFGAELFFKMS 103


>ref|XP_002282986.1| PREDICTED: uncharacterized protein LOC100267842 [Vitis vinifera]
           gi|302142275|emb|CBI19478.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  149 bits (377), Expect = 2e-34
 Identities = 66/101 (65%), Positives = 77/101 (76%)
 Frame = -3

Query: 303 MENGXXXXXXXXXXXLRSICSFPNSSTSSKWVYAVFWRIVPRNFPPPRWEFGGSALDLSK 124
           ME+G           LR +CS  +SS SSKWVYAVFWRI+PRN+PPP+W++GG ALD  K
Sbjct: 1   MESGVPMLNCLLQHALRGLCSCSDSSNSSKWVYAVFWRILPRNYPPPKWDYGGGALDRCK 60

Query: 123 GNKRNWILVWEDGFCDFNECEQRRSEYLNDKFGADVFFKMS 1
           GNKRNWILVWEDGFCDF ECE+   EY+  +FGADVFFKMS
Sbjct: 61  GNKRNWILVWEDGFCDFYECERAGGEYMKGRFGADVFFKMS 101


>emb|CAN61027.1| hypothetical protein VITISV_001147 [Vitis vinifera]
          Length = 387

 Score =  147 bits (372), Expect = 7e-34
 Identities = 62/85 (72%), Positives = 72/85 (84%)
 Frame = -3

Query: 255 RSICSFPNSSTSSKWVYAVFWRIVPRNFPPPRWEFGGSALDLSKGNKRNWILVWEDGFCD 76
           R +CS  +SS SSKWVYAVFWRI+PRN+PPP+W++GG ALD  KGNKRNWILVWEDGFCD
Sbjct: 24  RGLCSCSDSSNSSKWVYAVFWRILPRNYPPPKWDYGGGALDRCKGNKRNWILVWEDGFCD 83

Query: 75  FNECEQRRSEYLNDKFGADVFFKMS 1
           F ECE+   EY+  +FGADVFFKMS
Sbjct: 84  FYECERAGGEYMKGRFGADVFFKMS 108


Top